FFCP PHASE1:Hg19::chr10:90983566..90983579,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3988 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6617 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=7bp_to_uc009xtr.1_5end | |||
|cluster_id=chr10:90983566..90983579,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_14_at_LIPA_5end | |||
|id=chr10:90983566..90983579,- | |||
|ontology_enrichment_celltype=CL:0000235!3.42e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.25e-90;6!CL:0000840;6.72e-34;5!CL:0000990;6.95e-23;8!CL:0000451;7.22e-19;10!CL:0000473;6.40e-12;39!CL:0000234;6.40e-12;39!CL:0000346;1.35e-08;3!CL:1000428;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.65e-90,6;CL:0000840,6.72e-34,5;CL:0001029,6.72e-34,5;CL:0002194,2.85e-23,59;CL:0000576,2.85e-23,59;CL:0000040,2.85e-23,59;CL:0000559,2.85e-23,59;CL:0000990,6.95e-23,8;CL:0002009,1.61e-22,61;CL:0000839,7.83e-21,66;CL:0000557,1.59e-20,67;CL:0000766,4.10e-19,72;CL:0000451,7.22e-19,10;CL:0000763,9.49e-13,108;CL:0000049,9.49e-13,108;CL:0002087,5.75e-12,115;CL:0000473,1.31e-11,48;CL:0000234,1.31e-11,48;CL:0002031,1.84e-11,120;CL:0000738,4.28e-10,136;CL:0000346,1.21e-08,3;CL:1000428,1.21e-08,3;CL:0002032,1.72e-08,161;CL:0000837,1.72e-08,161;CL:0000037,3.99e-08,168;CL:0000988,1.07e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.35e-08;3!UBERON:0001992;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.09e-18,76;UBERON:0001474,8.52e-17,82;UBERON:0004765,2.63e-15,90;UBERON:0002405,8.19e-15,93;UBERON:0002390,4.68e-14,98;UBERON:0003061,4.68e-14,98;UBERON:0001434,8.96e-14,100;UBERON:0002193,9.49e-13,108;UBERON:0000412,1.21e-08,3;UBERON:0001992,1.21e-08,3;UBERON:0002204,3.55e-08,167 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0.671746422719773,0.971680998056939,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0.795285947051099,0,0.189069634328136,0,0,0,0,0,5.19275829847493,5.22389211897802,8.11043559165077,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,1.23108503043699,0.702012795417713,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,6.08118903205952,1.50677127429638,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.157702415033935,0,0.300946099727719,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0.255679882248303,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.340776043570843,0,0.146552233678082,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0.0771741581079447,0.437119121007915,0,0,0,0,0,0.4226557275834,0.339854229375634,0.187967835959707,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@LIPA | |||
}} |
Latest revision as of 21:39, 19 September 2015
Short description: | p14@LIPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LIPA_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 7bp_to_uc009xtr.1_5end |
EntrezGene: | LIPA |
HGNC: | 6617 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.65e-90 | 6 |
immature conventional dendritic cell | 6.72e-34 | 5 |
common dendritic progenitor | 6.72e-34 | 5 |
monopoietic cell | 2.85e-23 | 59 |
monocyte | 2.85e-23 | 59 |
monoblast | 2.85e-23 | 59 |
promonocyte | 2.85e-23 | 59 |
conventional dendritic cell | 6.95e-23 | 8 |
macrophage dendritic cell progenitor | 1.61e-22 | 61 |
myeloid lineage restricted progenitor cell | 7.83e-21 | 66 |
granulocyte monocyte progenitor cell | 1.59e-20 | 67 |
myeloid leukocyte | 4.10e-19 | 72 |
dendritic cell | 7.22e-19 | 10 |
myeloid cell | 9.49e-13 | 108 |
common myeloid progenitor | 9.49e-13 | 108 |
nongranular leukocyte | 5.75e-12 | 115 |
defensive cell | 1.31e-11 | 48 |
phagocyte | 1.31e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 1.84e-11 | 120 |
leukocyte | 4.28e-10 | 136 |
hair follicle dermal papilla cell | 1.21e-08 | 3 |
stem cell of epidermis | 1.21e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-08 | 161 |
hematopoietic stem cell | 3.99e-08 | 168 |
hematopoietic cell | 1.07e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.09e-18 | 76 |
bone element | 8.52e-17 | 82 |
skeletal element | 2.63e-15 | 90 |
immune system | 8.19e-15 | 93 |
hematopoietic system | 4.68e-14 | 98 |
blood island | 4.68e-14 | 98 |
skeletal system | 8.96e-14 | 100 |
hemolymphoid system | 9.49e-13 | 108 |
dermal papilla | 1.21e-08 | 3 |
papillary layer of dermis | 1.21e-08 | 3 |
musculoskeletal system | 3.55e-08 | 167 |