FFCP PHASE1:Hg19::chr10:91174742..91174788,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:91174742..91174788,- to FFCP PHASE1:Hg19::chr10:91174742..91174788,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3988 | |EntrezGene=3988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6617 | |HGNC=6617 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUT7 | |UniProt=E7EUT7 | ||
|association_with_transcript=-360bp_to_ENST00000425287,uc001kgb.3,uc001kgc.3_5end | |||
|cluster_id=chr10:91174742..91174788,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_LIPA_5end | |||
|id=chr10:91174742..91174788,- | |||
|ontology_enrichment_celltype=CL:0002057!3.83e-12!42;CL:0000860!2.89e-11!45;CL:0000766!1.22e-09!76;CL:0002194!9.80e-09!63;CL:0000576!9.80e-09!63;CL:0000040!9.80e-09!63;CL:0000559!9.80e-09!63;CL:0000839!2.40e-08!70;CL:0002009!7.41e-08!65;CL:0000557!3.14e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.81e-18;33!CL:0002057;4.81e-18;33!CL:0000473;1.47e-13;39!CL:0000234;1.47e-13;39!CL:0000576;2.05e-09;48!CL:0000766;1.96e-07;69!CL:0000346;4.42e-07;3!CL:1000428;4.42e-07;3!CL:0002559;8.05e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.25e-16,42;CL:0002057,3.25e-16,42;CL:0000473,5.49e-15,48;CL:0000234,5.49e-15,48;CL:0000766,2.85e-14,72;CL:0002194,8.19e-12,59;CL:0000576,8.19e-12,59;CL:0000040,8.19e-12,59;CL:0000559,8.19e-12,59;CL:0002009,3.15e-11,61;CL:0000839,6.66e-11,66;CL:0002320,5.87e-10,361;CL:0000557,1.08e-09,67;CL:0000134,1.83e-09,354;CL:0000048,3.52e-09,427;CL:0000723,8.54e-09,433;CL:0000034,9.08e-09,441;CL:0000219,4.05e-08,386;CL:0000763,9.17e-08,108;CL:0000049,9.17e-08,108;CL:0000346,2.43e-07,3;CL:1000428,2.43e-07,3;CL:0002559,4.53e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.84e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.46e-07!167;UBERON:0004765!2.48e-07!101;UBERON:0001434!2.48e-07!101;UBERON:0002371!6.41e-07!80;UBERON:0002193!6.94e-07!112;UBERON:0001474!8.74e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;4.42e-07;3!UBERON:0001992;4.42e-07;3!UBERON:0002073;8.05e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.15e-09,371;UBERON:0002371,7.21e-08,76;UBERON:0002390,1.38e-07,98;UBERON:0003061,1.38e-07,98;UBERON:0000412,2.43e-07,3;UBERON:0001992,2.43e-07,3;UBERON:0002073,4.53e-07,5;UBERON:0005086,4.53e-07,5;UBERON:0002193,5.96e-07,108;UBERON:0001474,6.83e-07,82 | |||
|phase1_expression=1.81678379270557,0.428201047781966,1.83240725324762,0,0,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0,0.697801167972428,0.436882744260345,0.527533956456907,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0,0.738726348460727,0.612002073732759,0.313454721478088,0,0.273748850145768,0.376627918784408,0.229240217243854,0.0821005894499457,0,1.18009283054671,0,0.309632246632152,0,0.6024118375565,0,0,0,0,0,0.200544447470142,0.434021741431704,0.447830948479849,0,1.03030227053675,0.872389432677388,0.377875943688809,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,3.74000110018796,2.30544635876191,3.78371567821736,4.48169384957604,2.5819387343353,0,0.941211697713023,0.272906150057846,0.898893937780338,10.1007684482398,7.38136762275015,5.75403413219137,5.27762080298746,1.99463657621632,7.6720455095885,12.7692064996577,6.24123747160254,16.8162007228805,3.51748131359441,0.521482918420201,3.47502151528187,13.3187890579341,9.57521853567668,18.9877432464531,0.211255286311942,0.212604299965044,0.628975936525128,0.561643155732475,0.450530678524519,0.48217676009124,0.285012743741249,1.59133341759272,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.334231370655521,0,0.221533894583621,0,0,0,0,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,2.01210257911091,1.2786256184353,0.722878304769133,0.50133791063589,0.724232594804119,0,0.486634870302636,0.378139268656271,0,0.614843499851882,0.785874452986276,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0.496971951695318,0.633152558322899,0.662045904066094,0,0,1.12135520028461,0,0.98667019366864,0.933633106199299,0.404132016209064,0.326923806226917,1.66493170409425,0,0.70296429550139,0,0.570471821544449,0.448346041655403,0.117434498643765,0.323745888736263,0.280901613404497,0,0,0.413303124703062,2.37600571456411,1.48360157567134,0.910161361938026,1.43723628363248,0.505008341862199,0.125118519871964,0.277064115484183,2.19488810440419,0.612975591598039,0.45071417671979,0.680593098960126,0.538168907066586,0.213557388818567,0.423863802319124,0.900273288253207,1.03052529238439,1.28820270022815,0.744467425326359,0.675105328965065,0.974370051611986,0.252433774244115,0.552299391853796,0.484938170456436,0,0.503760491138201,1.18692414617341,0.57978255948989,0.272746120590835,0,0.243947412259191,0,0,0.207322110030741,0,0,3.12899064659632,1.92972281457866,6.90674606762403,0.464367928031979,1.44375896333917,0.354920400119532,0.337169380156203,0.723033089650446,0.441175890929576,0.217879444092406,0.949082476444386,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0.100528972411631,0,0.977424915930974,0,0,0.115930404975077,0.587043471179108,0.288732895522148,0.925971025153221,0.951270761172991,1.58040879591855,0.858486162094873,0.492434012174795,0.234004265139238,0.445893486866185,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0.621984346622316,0.576479813667846,0.25248486685276,0.380987365753014,1.14596527667483,0,0,0,0.600686115687835,0.857479297891735,1.23344192779897,0.43596006883328,0.4400297149257,0.517086863031111,3.57656445851882,1.690605505112,0.797814349754612,2.08014873822732,0.514414748524284,0,0.532844358032199,0.428933980974443,1.08524321078289,0.823240336780769,1.62868092146868,0.355391948742546,0,0.301439377059586,0.871533458600294,0.099972991182057,0,2.00902836572851,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,1.07436577943937,0,0.197030760201927,0.215627574859517,0,0,0,0.773288812777695,0.335032530668698,0,2.24702107184155,0,1.65766205374414,0.49076596687656,0.500170521059677,0.271265023699736,1.45579603071565,0.713715955188647,0.473107245101804,0,0.601892199455438,0,2.0694614258501,0,0.184369168541703,1.04260337361699,1.17480694477644,1.02943027143257,0.206768026122887,0.647142602455851,0.106727557803444,0.909382714338778,0,0.604780586659361,1.24053903909388,1.53461973288062,1.40330047216537,0.896974044789907,1.02341449813341,0.160853921143607,1.48418066444991,0.616838775210622,0.710246901252508,0.410635780069046,0.519254429183621,1.27831416305955,0.120859449591622,0,0.0920809889358963,0.803701137152247,0.364182336013434,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0.831076008928724,0.671624264166535,0,1.0457418040996,0.256450125116389,0,0,1.03041011647722,0.366277859273374,0.82509499920588,0,0,0,0.193341436584244,0,0.15350367472613,0.275673144969061,0.751941714077915,0.870100163485371,0.0852266274161009,0.534192213880424,0,0,0.255225424989168,0.30347334256665,0,0.31481234683064,0,1.54016790088044,0.532306030317022,0,0.37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|phase1_expression=1.81678379270557,0.428201047781966,1.83240725324762,0,0,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0,0.697801167972428,0.436882744260345,0.527533956456907,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0,0.738726348460727,0.612002073732759,0.313454721478088,0,0.273748850145768,0.376627918784408,0.229240217243854,0.0821005894499457,0,1.18009283054671,0,0.309632246632152,0,0.6024118375565,0,0,0,0,0,0.200544447470142,0.434021741431704,0.447830948479849,0,1.03030227053675,0.872389432677388,0.377875943688809,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,3.74000110018796,2.30544635876191,3.78371567821736,4.48169384957604,2.5819387343353,0,0.941211697713023,0.272906150057846,0.898893937780338,10.1007684482398,7.38136762275015,5.75403413219137,5.27762080298746,1.99463657621632,7.6720455095885,12.7692064996577,6.24123747160254,16.8162007228805,3.51748131359441,0.521482918420201,3.47502151528187,13.3187890579341,9.57521853567668,18.9877432464531,0.211255286311942,0.212604299965044,0.628975936525128,0.561643155732475,0.450530678524519,0.48217676009124,0.285012743741249,1.59133341759272,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.334231370655521,0,0.221533894583621,0,0,0,0,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,2.01210257911091,1.2786256184353,0.722878304769133,0.50133791063589,0.724232594804119,0,0.486634870302636,0.378139268656271,0,0.614843499851882,0.785874452986276,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0.496971951695318,0.633152558322899,0.662045904066094,0,0,1.12135520028461,0,0.98667019366864,0.933633106199299,0.404132016209064,0.326923806226917,1.66493170409425,0,0.70296429550139,0,0.570471821544449,0.448346041655403,0.117434498643765,0.323745888736263,0.280901613404497,0,0,0.413303124703062,2.37600571456411,1.48360157567134,0.910161361938026,1.43723628363248,0.505008341862199,0.125118519871964,0.277064115484183,2.19488810440419,0.612975591598039,0.45071417671979,0.680593098960126,0.538168907066586,0.213557388818567,0.423863802319124,0.900273288253207,1.03052529238439,1.28820270022815,0.744467425326359,0.675105328965065,0.974370051611986,0.252433774244115,0.552299391853796,0.484938170456436,0,0.503760491138201,1.18692414617341,0.57978255948989,0.272746120590835,0,0.243947412259191,0,0,0.207322110030741,0,0,3.12899064659632,1.92972281457866,6.90674606762403,0.464367928031979,1.44375896333917,0.354920400119532,0.337169380156203,0.723033089650446,0.441175890929576,0.217879444092406,0.949082476444386,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0.100528972411631,0,0.977424915930974,0,0,0.115930404975077,0.587043471179108,0.288732895522148,0.925971025153221,0.951270761172991,1.58040879591855,0.858486162094873,0.492434012174795,0.234004265139238,0.445893486866185,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0.621984346622316,0.576479813667846,0.25248486685276,0.380987365753014,1.14596527667483,0,0,0,0.600686115687835,0.857479297891735,1.23344192779897,0.43596006883328,0.4400297149257,0.517086863031111,3.57656445851882,1.690605505112,0.797814349754612,2.08014873822732,0.514414748524284,0,0.532844358032199,0.428933980974443,1.08524321078289,0.823240336780769,1.62868092146868,0.355391948742546,0,0.301439377059586,0.871533458600294,0.099972991182057,0,2.00902836572851,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,1.07436577943937,0,0.197030760201927,0.215627574859517,0,0,0,0.773288812777695,0.335032530668698,0,2.24702107184155,0,1.65766205374414,0.49076596687656,0.500170521059677,0.271265023699736,1.45579603071565,0.713715955188647,0.473107245101804,0,0.601892199455438,0,2.0694614258501,0,0.184369168541703,1.04260337361699,1.17480694477644,1.02943027143257,0.206768026122887,0.647142602455851,0.106727557803444,0.909382714338778,0,0.604780586659361,1.24053903909388,1.53461973288062,1.40330047216537,0.896974044789907,1.02341449813341,0.160853921143607,1.48418066444991,0.616838775210622,0.710246901252508,0.410635780069046,0.519254429183621,1.27831416305955,0.120859449591622,0,0.0920809889358963,0.803701137152247,0.364182336013434,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0.831076008928724,0.671624264166535,0,1.0457418040996,0.256450125116389,0,0,1.03041011647722,0.366277859273374,0.82509499920588,0,0,0,0.193341436584244,0,0.15350367472613,0.275673144969061,0.751941714077915,0.870100163485371,0.0852266274161009,0.534192213880424,0,0,0.255225424989168,0.30347334256665,0,0.31481234683064,0,1.54016790088044,0.532306030317022,0,0.37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| ||
|short_description=p6@LIPA | |||
}} | }} |
Latest revision as of 22:39, 19 September 2015
Short description: | p6@LIPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LIPA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -360bp_to_ENST00000425287, uc001kgb.3, uc001kgc.3_5end |
EntrezGene: | LIPA |
HGNC: | 6617 |
UniProt: | E7EUT7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.25e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.25e-16 | 42 |
defensive cell | 5.49e-15 | 48 |
phagocyte | 5.49e-15 | 48 |
myeloid leukocyte | 2.85e-14 | 72 |
monopoietic cell | 8.19e-12 | 59 |
monocyte | 8.19e-12 | 59 |
monoblast | 8.19e-12 | 59 |
promonocyte | 8.19e-12 | 59 |
macrophage dendritic cell progenitor | 3.15e-11 | 61 |
myeloid lineage restricted progenitor cell | 6.66e-11 | 66 |
connective tissue cell | 5.87e-10 | 361 |
granulocyte monocyte progenitor cell | 1.08e-09 | 67 |
mesenchymal cell | 1.83e-09 | 354 |
multi fate stem cell | 3.52e-09 | 427 |
somatic stem cell | 8.54e-09 | 433 |
stem cell | 9.08e-09 | 441 |
motile cell | 4.05e-08 | 386 |
myeloid cell | 9.17e-08 | 108 |
common myeloid progenitor | 9.17e-08 | 108 |
hair follicle dermal papilla cell | 2.43e-07 | 3 |
stem cell of epidermis | 2.43e-07 | 3 |
hair follicle cell | 4.53e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.15e-09 | 371 |
bone marrow | 7.21e-08 | 76 |
hematopoietic system | 1.38e-07 | 98 |
blood island | 1.38e-07 | 98 |
dermal papilla | 2.43e-07 | 3 |
papillary layer of dermis | 2.43e-07 | 3 |
hair follicle | 4.53e-07 | 5 |
hair follicle placode | 4.53e-07 | 5 |
hemolymphoid system | 5.96e-07 | 108 |
bone element | 6.83e-07 | 82 |