FFCP PHASE1:Hg19::chr18:55711575..55711628,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:55711575..55711628,+
|short_description=p4@NEDD4L
|description=CAGE_peak_4_at_NEDD4L_5end
|association_with_transcript=0bp_to_ENST00000256830,ENST00000256...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23327 | |EntrezGene=23327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7728 | |HGNC=7728 | ||
|TSSclassifier=strong | |||
|UniProt=F5H602,Q96PU5 | |UniProt=F5H602,Q96PU5 | ||
|association_with_transcript=0bp_to_ENST00000256830,ENST00000256832,ENST00000356462,ENST00000382850,ENST00000400345,NM_001144967,NM_001243960,NM_015277,uc002lgx.2,uc002lgy.2,uc002lgz.2_5end | |||
|cluster_id=chr18:55711575..55711628,+ | |||
|description=CAGE_peak_4_at_NEDD4L_5end | |||
|id=chr18:55711575..55711628,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.11e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.86e-08,10;CL:0000541,1.86e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.70e-08;30 | |||
|ontology_enrichment_disease=DOID:305!4.33e-09!106;DOID:0050687!1.38e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.59e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.02e-24!86;UBERON:0007023!4.04e-24!115;UBERON:0001017!7.13e-24!82;UBERON:0000073!3.71e-22!94;UBERON:0001016!3.71e-22!94;UBERON:0001049!4.32e-22!57;UBERON:0005068!4.32e-22!57;UBERON:0006241!4.32e-22!57;UBERON:0007135!4.32e-22!57;UBERON:0000955!3.45e-19!69;UBERON:0006238!3.45e-19!69;UBERON:0003080!6.86e-19!42;UBERON:0002780!2.47e-18!41;UBERON:0001890!2.47e-18!41;UBERON:0006240!2.47e-18!41;UBERON:0002616!5.92e-18!59;UBERON:0003075!1.86e-17!86;UBERON:0007284!1.86e-17!86;UBERON:0002346!6.83e-16!90;UBERON:0001893!9.39e-16!34;UBERON:0002020!9.98e-16!34;UBERON:0003528!9.98e-16!34;UBERON:0002791!3.26e-15!33;UBERON:0001869!8.59e-15!32;UBERON:0003056!1.05e-13!61;UBERON:0004121!6.60e-12!169;UBERON:0000956!7.06e-12!25;UBERON:0000203!7.06e-12!25;UBERON:0002619!1.74e-11!22;UBERON:0000924!3.87e-11!173;UBERON:0006601!3.87e-11!173;UBERON:0001950!2.03e-10!20;UBERON:0000033!7.88e-10!123;UBERON:0000153!2.67e-09!129;UBERON:0007811!2.67e-09!129;UBERON:0000062!1.23e-08!511;UBERON:0000025!1.15e-07!194;UBERON:0004111!7.29e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.34e-18;41!UBERON:0001890;9.34e-18;41!UBERON:0003528;1.49e-17;34!UBERON:0002020;1.49e-17;34!UBERON:0001893;1.82e-17;34!UBERON:0002791;2.00e-17;32!UBERON:0001869;2.23e-17;32!UBERON:0002619;1.22e-15;22!UBERON:0000073;1.63e-15;53!UBERON:0002616;1.63e-15;53!UBERON:0000956;2.59e-15;25!UBERON:0000203;2.59e-15;25!UBERON:0001950;3.52e-14;20!UBERON:0001017;3.75e-11;75!UBERON:0000955;4.86e-11;68!UBERON:0001016;1.32e-09;83!UBERON:0007023;3.23e-09;114!UBERON:0000125;9.51e-07;9!UBERON:0002308;9.51e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.44e-28,81;UBERON:0001049,4.58e-27,56;UBERON:0005068,4.58e-27,56;UBERON:0006241,4.58e-27,56;UBERON:0007135,4.58e-27,56;UBERON:0007023,7.37e-27,114;UBERON:0000073,1.07e-25,53;UBERON:0002616,1.07e-25,53;UBERON:0001016,3.50e-25,89;UBERON:0002780,2.21e-23,41;UBERON:0001890,2.21e-23,41;UBERON:0003080,2.21e-23,41;UBERON:0006240,2.21e-23,41;UBERON:0000955,2.20e-22,68;UBERON:0006238,2.20e-22,68;UBERON:0001893,1.14e-20,34;UBERON:0003528,1.24e-20,34;UBERON:0002020,1.24e-20,34;UBERON:0011216,2.31e-20,223;UBERON:0003075,8.97e-20,82;UBERON:0007284,8.97e-20,82;UBERON:0002791,2.17e-19,32;UBERON:0001869,2.35e-19,32;UBERON:0002346,7.70e-18,86;UBERON:0010371,3.29e-17,104;UBERON:0003056,6.64e-16,61;UBERON:0002619,1.14e-15,22;UBERON:0000956,2.26e-15,25;UBERON:0000203,2.26e-15,25;UBERON:0001950,3.32e-14,20;UBERON:0010314,1.04e-10,132;UBERON:0004121,7.54e-10,171;UBERON:0000924,7.54e-10,171;UBERON:0006601,7.54e-10,171;UBERON:0000025,2.82e-09,192;UBERON:0004111,4.27e-07,240 | |||
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| ||
|short_description=p4@NEDD4L | |||
}} | }} |
Latest revision as of 23:05, 19 September 2015
Short description: | p4@NEDD4L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NEDD4L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256830, ENST00000256832, ENST00000356462, ENST00000382850, ENST00000400345, NM_001144967, NM_001243960, NM_015277, uc002lgx.2, uc002lgy.2, uc002lgz.2_5end |
EntrezGene: | NEDD4L |
HGNC: | 7728 |
UniProt: | F5H602Q96PU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.86e-08 | 10 |
melanoblast | 1.86e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.59e-07 | 106 |