FFCP PHASE1:Hg19::chr15:93447730..93447777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1106 | |EntrezGene=1106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1917 | |HGNC=1917 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3I4 | |UniProt=B7Z3I4 | ||
|association_with_transcript=27bp_to_ENST00000536619,uc010urb.1_5end | |association_with_transcript=27bp_to_ENST00000536619,uc010urb.1_5end | ||
|cluster_id=chr15:93447730..93447777,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_CHD2_5end | |description=CAGE_peak_4_at_CHD2_5end | ||
|id=chr15:93447730..93447777,+ | |id=chr15:93447730..93447777,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.30e-26!140;CL:0002057!8.92e-25!42;CL:0000860!7.29e-24!45;CL:0000037!2.14e-23!172;CL:0000566!2.14e-23!172;CL:0000988!1.35e-21!182;CL:0002032!9.45e-21!165;CL:0000837!9.45e-21!165;CL:0000766!1.71e-20!76;CL:0002031!4.66e-20!124;CL:0002087!6.03e-18!119;CL:0000763!8.49e-17!112;CL:0000049!8.49e-17!112;CL:0000557!1.16e-16!71;CL:0000839!4.77e-16!70;CL:0002009!7.42e-15!65;CL:0002194!5.99e-14!63;CL:0000576!5.99e-14!63;CL:0000040!5.99e-14!63;CL:0000559!5.99e-14!63;CL:0000094!8.20e-07!8 | |ontology_enrichment_celltype=CL:0000738!1.30e-26!140;CL:0002057!8.92e-25!42;CL:0000860!7.29e-24!45;CL:0000037!2.14e-23!172;CL:0000566!2.14e-23!172;CL:0000988!1.35e-21!182;CL:0002032!9.45e-21!165;CL:0000837!9.45e-21!165;CL:0000766!1.71e-20!76;CL:0002031!4.66e-20!124;CL:0002087!6.03e-18!119;CL:0000763!8.49e-17!112;CL:0000049!8.49e-17!112;CL:0000557!1.16e-16!71;CL:0000839!4.77e-16!70;CL:0002009!7.42e-15!65;CL:0002194!5.99e-14!63;CL:0000576!5.99e-14!63;CL:0000040!5.99e-14!63;CL:0000559!5.99e-14!63;CL:0000094!8.20e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.29e-21;33!CL:0002057;8.29e-21;33!CL:0000576;2.52e-15;48!CL:0000473;1.14e-13;39!CL:0000234;1.14e-13;39!CL:0000766;1.98e-12;69!CL:0000094;2.13e-07;8!CL:0002087;2.30e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.90e-28,136;CL:0000860,7.85e-27,42;CL:0002057,7.85e-27,42;CL:0000766,8.08e-24,72;CL:0000037,9.63e-24,168;CL:0000988,7.47e-22,177;CL:0000473,9.25e-22,48;CL:0000234,9.25e-22,48;CL:0002031,5.60e-21,120;CL:0002032,6.26e-21,161;CL:0000837,6.26e-21,161;CL:0000557,1.85e-19,67;CL:0000839,9.24e-19,66;CL:0002087,1.55e-18,115;CL:0000763,1.88e-18,108;CL:0000049,1.88e-18,108;CL:0002009,1.85e-17,61;CL:0002194,1.97e-16,59;CL:0000576,1.97e-16,59;CL:0000040,1.97e-16,59;CL:0000559,1.97e-16,59;CL:0000094,2.80e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-19;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-16!102;UBERON:0003061!1.24e-16!102;UBERON:0002371!3.41e-15!80;UBERON:0001474!6.67e-13!86;UBERON:0002193!1.71e-12!112;UBERON:0007023!2.78e-09!115;UBERON:0004765!4.91e-09!101;UBERON:0001434!4.91e-09!101;UBERON:0002405!1.32e-08!115;UBERON:0001049!1.22e-07!57;UBERON:0005068!1.22e-07!57;UBERON:0006241!1.22e-07!57;UBERON:0007135!1.22e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.79e-18,98;UBERON:0003061,1.79e-18,98;UBERON:0002371,1.80e-18,76;UBERON:0001474,1.06e-15,82;UBERON:0002193,4.26e-14,108;UBERON:0004765,8.64e-13,90;UBERON:0002405,3.10e-12,93;UBERON:0001434,4.15e-10,100;UBERON:0007023,2.93e-08,114;UBERON:0001049,3.22e-07,56;UBERON:0005068,3.22e-07,56;UBERON:0006241,3.22e-07,56;UBERON:0007135,3.22e-07,56 | |||
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| ||
|short_description=p4@CHD2 | |short_description=p4@CHD2 | ||
}} | }} |
Latest revision as of 23:24, 19 September 2015
Short description: | p4@CHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 27bp_to_ENST00000536619, uc010urb.1_5end |
EntrezGene: | CHD2 |
HGNC: | 1917 |
UniProt: | B7Z3I4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.90e-28 | 136 |
classical monocyte | 7.85e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.85e-27 | 42 |
myeloid leukocyte | 8.08e-24 | 72 |
hematopoietic stem cell | 9.63e-24 | 168 |
hematopoietic cell | 7.47e-22 | 177 |
defensive cell | 9.25e-22 | 48 |
phagocyte | 9.25e-22 | 48 |
hematopoietic lineage restricted progenitor cell | 5.60e-21 | 120 |
hematopoietic oligopotent progenitor cell | 6.26e-21 | 161 |
hematopoietic multipotent progenitor cell | 6.26e-21 | 161 |
granulocyte monocyte progenitor cell | 1.85e-19 | 67 |
myeloid lineage restricted progenitor cell | 9.24e-19 | 66 |
nongranular leukocyte | 1.55e-18 | 115 |
myeloid cell | 1.88e-18 | 108 |
common myeloid progenitor | 1.88e-18 | 108 |
macrophage dendritic cell progenitor | 1.85e-17 | 61 |
monopoietic cell | 1.97e-16 | 59 |
monocyte | 1.97e-16 | 59 |
monoblast | 1.97e-16 | 59 |
promonocyte | 1.97e-16 | 59 |
granulocyte | 2.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.79e-18 | 98 |
blood island | 1.79e-18 | 98 |
bone marrow | 1.80e-18 | 76 |
bone element | 1.06e-15 | 82 |
hemolymphoid system | 4.26e-14 | 108 |
skeletal element | 8.64e-13 | 90 |
immune system | 3.10e-12 | 93 |
skeletal system | 4.15e-10 | 100 |
adult organism | 2.93e-08 | 114 |
neural tube | 3.22e-07 | 56 |
neural rod | 3.22e-07 | 56 |
future spinal cord | 3.22e-07 | 56 |
neural keel | 3.22e-07 | 56 |