FFCP PHASE1:Hg19::chr12:66220713..66220724,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:66220713..66220724,- to FFCP PHASE1:Hg19::chr12:66220713..66220724,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=204010 | |EntrezGene=204010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=35752 | |HGNC=35752 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000489520,NR_026825,uc001sso.2_5end | |||
|cluster_id=chr12:66220713..66220724,- | |||
|description=CAGE_peak_2_at_RPSAP52_5end | |||
|id=chr12:66220713..66220724,- | |||
|ontology_enrichment_celltype=CL:0000055!1.62e-22!180;CL:0000057!1.92e-15!75;CL:0002620!3.81e-15!23;CL:0002371!7.88e-12!591;CL:0000680!2.05e-10!57;CL:0000056!2.05e-10!57;CL:0000355!2.05e-10!57;CL:0000548!5.65e-10!679;CL:0000004!5.65e-10!679;CL:0000255!5.65e-10!679;CL:0000012!1.03e-09!682;CL:0000144!4.06e-09!625;CL:0000220!7.75e-09!246;CL:0002321!1.33e-08!248;CL:0000187!1.81e-08!54;CL:0000183!7.51e-08!59;CL:0000192!1.08e-07!42;CL:0000514!1.08e-07!42;CL:0000393!1.91e-07!60;CL:0000211!1.91e-07!60;CL:0002556!5.62e-07!6;CL:0000723!9.65e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002551;6.76e-09;6!CL:0002556;1.88e-08;6!CL:0002582;5.81e-08;3!CL:0000515;5.81e-08;3!CL:0002620;6.56e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.41e-09,76;CL:0002551,6.11e-09,6;CL:0002556,2.32e-08,6;CL:0002582,3.19e-08,3;CL:0002620,1.00e-07,23;CL:0002574,6.80e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.12e-08;3!DOID:127;3.12e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.39e-08,3;DOID:127,2.39e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.69e-16!83;UBERON:0002329!4.69e-16!83;UBERON:0003077!4.69e-16!83;UBERON:0003059!4.69e-16!83;UBERON:0007282!4.69e-16!83;UBERON:0009618!4.69e-16!83;UBERON:0007285!4.69e-16!83;UBERON:0000486!6.20e-14!82;UBERON:0002199!1.54e-13!45;UBERON:0002416!1.54e-13!45;UBERON:0003102!2.02e-13!95;UBERON:0002097!2.89e-12!40;UBERON:0004290!8.89e-12!70;UBERON:0001637!2.53e-11!42;UBERON:0003509!2.53e-11!42;UBERON:0004572!2.53e-11!42;UBERON:0001134!8.63e-10!61;UBERON:0002036!8.63e-10!61;UBERON:0003082!8.63e-10!61;UBERON:0001981!3.21e-09!60;UBERON:0007500!3.21e-09!60;UBERON:0004537!3.21e-09!60;UBERON:0006965!3.21e-09!60;UBERON:0002385!3.47e-09!63;UBERON:0001015!3.47e-09!63;UBERON:0000383!3.47e-09!63;UBERON:0004573!3.95e-09!33;UBERON:0004571!3.95e-09!33;UBERON:0005256!8.46e-09!143;UBERON:0002049!2.81e-08!79;UBERON:0007798!2.81e-08!79;UBERON:0000055!4.33e-08!69;UBERON:0004872!5.16e-08!84;UBERON:0003129!1.79e-07!11;UBERON:0000490!2.85e-07!138;UBERON:0001758!5.62e-07!6;UBERON:0003672!5.62e-07!6;UBERON:0000119!8.86e-07!312;UBERON:0000483!9.11e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.88e-08;6!UBERON:0003672;1.88e-08;6!UBERON:0003129;2.63e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,2.32e-08,6;UBERON:0003672,2.32e-08,6;UBERON:0003129,3.15e-07,7;UBERON:0002329,4.01e-07,71;UBERON:0003059,4.01e-07,71;UBERON:0007282,4.01e-07,71;UBERON:0004290,4.01e-07,71;UBERON:0009618,4.01e-07,71;UBERON:0004573,4.09e-07,33;UBERON:0004571,4.09e-07,33;UBERON:0003077,5.37e-07,72;UBERON:0007285,5.37e-07,72;UBERON:0000486,5.41e-07,83;UBERON:0007524,7.14e-07,73 | |||
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| ||
|short_description=p2@RPSAP52 | |||
}} | }} |
Latest revision as of 23:30, 19 September 2015
Short description: | p2@RPSAP52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPSAP52_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000489520, NR_026825, uc001sso.2_5end |
EntrezGene: | RPSAP52 |
HGNC: | 35752 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.41e-09 | 76 |
fibroblast of dermis | 6.11e-09 | 6 |
fibroblast of periodontium | 2.32e-08 | 6 |
visceral preadipocyte | 3.19e-08 | 3 |
skin fibroblast | 1.00e-07 | 23 |
stromal cell of pancreas | 6.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
periodontium | 2.32e-08 | 6 |
dentition | 2.32e-08 | 6 |
skull | 3.15e-07 | 7 |
somite | 4.01e-07 | 71 |
presomitic mesoderm | 4.01e-07 | 71 |
presumptive segmental plate | 4.01e-07 | 71 |
dermomyotome | 4.01e-07 | 71 |
trunk paraxial mesoderm | 4.01e-07 | 71 |
systemic artery | 4.09e-07 | 33 |
systemic arterial system | 4.09e-07 | 33 |
paraxial mesoderm | 5.37e-07 | 72 |
presumptive paraxial mesoderm | 5.37e-07 | 72 |
multilaminar epithelium | 5.41e-07 | 83 |
dense mesenchyme tissue | 7.14e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.39e-08 | 3 |
leiomyoma | 2.39e-08 | 3 |