FFCP PHASE1:Hg19::chrX:152773690..152773718,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |EntrezGene=633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1044 | |HGNC=1044 | ||
|TSSclassifier=strong | |||
|UniProt=P21810 | |UniProt=P21810 | ||
|association_with_transcript=-157bp_to_U11686_5end | |association_with_transcript=-157bp_to_U11686_5end | ||
|cluster_id=chrX:152773690..152773718,+ | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_10_at_BGN_5end | |description=CAGE_peak_10_at_BGN_5end | ||
|id=chrX:152773690..152773718,+ | |id=chrX:152773690..152773718,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.58e-26!180;CL:0000183!8.68e-15!59;CL:0000187!2.09e-14!54;CL:0000680!5.57e-14!57;CL:0000056!5.57e-14!57;CL:0000355!5.57e-14!57;CL:0000057!5.84e-14!75;CL:0000359!9.60e-13!32;CL:0000393!1.34e-12!60;CL:0000211!1.34e-12!60;CL:0000192!2.07e-12!42;CL:0000514!2.07e-12!42;CL:0000222!2.69e-12!119;CL:0002494!2.27e-07!16;CL:0002334!2.96e-07!12 | |ontology_enrichment_celltype=CL:0000055!5.58e-26!180;CL:0000183!8.68e-15!59;CL:0000187!2.09e-14!54;CL:0000680!5.57e-14!57;CL:0000056!5.57e-14!57;CL:0000355!5.57e-14!57;CL:0000057!5.84e-14!75;CL:0000359!9.60e-13!32;CL:0000393!1.34e-12!60;CL:0000211!1.34e-12!60;CL:0000192!2.07e-12!42;CL:0000514!2.07e-12!42;CL:0000222!2.69e-12!119;CL:0002494!2.27e-07!16;CL:0002334!2.96e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.45e-12;32!CL:0000327;5.38e-09;15!CL:0002620;6.98e-09;23!CL:0000499;1.98e-07;28!CL:0002334;6.30e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.48e-15,76;CL:0000359,8.96e-12,32;CL:0000048,6.45e-10,427;CL:0000187,1.62e-09,55;CL:0000723,2.25e-09,433;CL:0000327,5.43e-09,15;CL:0002620,6.20e-09,23;CL:0000222,9.61e-09,121;CL:0000034,1.11e-08,441;CL:0000680,1.27e-08,58;CL:0000056,1.27e-08,58;CL:0000355,1.27e-08,58;CL:0000192,6.37e-08,43;CL:0000514,6.37e-08,43;CL:0000393,7.93e-08,61;CL:0000211,7.93e-08,61;CL:0000499,2.16e-07,28;CL:0002334,6.82e-07,12;CL:0002570,8.78e-07,8;CL:0002494,9.56e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.79e-23!84;UBERON:0002049!8.99e-20!79;UBERON:0007798!8.99e-20!79;UBERON:0000055!1.09e-18!69;UBERON:0001981!5.34e-18!60;UBERON:0007500!5.34e-18!60;UBERON:0004537!5.34e-18!60;UBERON:0006965!5.34e-18!60;UBERON:0001009!1.03e-17!113;UBERON:0004535!4.26e-17!110;UBERON:0001637!6.01e-16!42;UBERON:0003509!6.01e-16!42;UBERON:0004572!6.01e-16!42;UBERON:0004573!1.46e-13!33;UBERON:0004571!1.46e-13!33;UBERON:0001134!3.03e-13!61;UBERON:0002036!3.03e-13!61;UBERON:0003082!3.03e-13!61;UBERON:0002385!2.87e-12!63;UBERON:0001015!2.87e-12!63;UBERON:0000383!2.87e-12!63;UBERON:0003914!5.01e-12!118;UBERON:0000914!5.92e-12!83;UBERON:0002329!5.92e-12!83;UBERON:0003077!5.92e-12!83;UBERON:0003059!5.92e-12!83;UBERON:0007282!5.92e-12!83;UBERON:0009618!5.92e-12!83;UBERON:0007285!5.92e-12!83;UBERON:0004290!7.04e-12!70;UBERON:0007100!2.02e-10!27;UBERON:0000477!5.79e-10!286;UBERON:0000948!5.91e-10!24;UBERON:0005498!5.91e-10!24;UBERON:0004140!5.91e-10!24;UBERON:0009881!5.91e-10!24;UBERON:0004141!5.91e-10!24;UBERON:0003084!5.91e-10!24;UBERON:0007005!5.91e-10!24;UBERON:0004139!5.91e-10!24;UBERON:0004291!5.91e-10!24;UBERON:0004111!3.60e-09!241;UBERON:0000486!6.79e-09!82;UBERON:0000025!1.60e-08!194;UBERON:0000947!9.94e-08!21;UBERON:0010191!9.94e-08!21;UBERON:0005256!4.53e-07!143;UBERON:0000119!6.14e-07!312;UBERON:0000490!8.04e-07!138 | |ontology_enrichment_uberon=UBERON:0004872!1.79e-23!84;UBERON:0002049!8.99e-20!79;UBERON:0007798!8.99e-20!79;UBERON:0000055!1.09e-18!69;UBERON:0001981!5.34e-18!60;UBERON:0007500!5.34e-18!60;UBERON:0004537!5.34e-18!60;UBERON:0006965!5.34e-18!60;UBERON:0001009!1.03e-17!113;UBERON:0004535!4.26e-17!110;UBERON:0001637!6.01e-16!42;UBERON:0003509!6.01e-16!42;UBERON:0004572!6.01e-16!42;UBERON:0004573!1.46e-13!33;UBERON:0004571!1.46e-13!33;UBERON:0001134!3.03e-13!61;UBERON:0002036!3.03e-13!61;UBERON:0003082!3.03e-13!61;UBERON:0002385!2.87e-12!63;UBERON:0001015!2.87e-12!63;UBERON:0000383!2.87e-12!63;UBERON:0003914!5.01e-12!118;UBERON:0000914!5.92e-12!83;UBERON:0002329!5.92e-12!83;UBERON:0003077!5.92e-12!83;UBERON:0003059!5.92e-12!83;UBERON:0007282!5.92e-12!83;UBERON:0009618!5.92e-12!83;UBERON:0007285!5.92e-12!83;UBERON:0004290!7.04e-12!70;UBERON:0007100!2.02e-10!27;UBERON:0000477!5.79e-10!286;UBERON:0000948!5.91e-10!24;UBERON:0005498!5.91e-10!24;UBERON:0004140!5.91e-10!24;UBERON:0009881!5.91e-10!24;UBERON:0004141!5.91e-10!24;UBERON:0003084!5.91e-10!24;UBERON:0007005!5.91e-10!24;UBERON:0004139!5.91e-10!24;UBERON:0004291!5.91e-10!24;UBERON:0004111!3.60e-09!241;UBERON:0000486!6.79e-09!82;UBERON:0000025!1.60e-08!194;UBERON:0000947!9.94e-08!21;UBERON:0010191!9.94e-08!21;UBERON:0005256!4.53e-07!143;UBERON:0000119!6.14e-07!312;UBERON:0000490!8.04e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.42e-12;33!UBERON:0004571;1.42e-12;33!UBERON:0001637;7.39e-12;42!UBERON:0003509;7.39e-12;42!UBERON:0004572;7.39e-12;42!UBERON:0000948;1.02e-08;22!UBERON:0000947;2.04e-08;21!UBERON:0010191;2.04e-08;21!UBERON:0007100;3.31e-08;25!UBERON:0002049;6.69e-07;75!UBERON:0007798;6.69e-07;75 | |||
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| ||
|short_description=p10@BGN | |short_description=p10@BGN | ||
}} | }} |
Latest revision as of 00:04, 20 September 2015
Short description: | p10@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | -157bp_to_U11686_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.48e-15 | 76 |
vascular associated smooth muscle cell | 8.96e-12 | 32 |
multi fate stem cell | 6.45e-10 | 427 |
muscle cell | 1.62e-09 | 55 |
somatic stem cell | 2.25e-09 | 433 |
extracellular matrix secreting cell | 5.43e-09 | 15 |
skin fibroblast | 6.20e-09 | 23 |
mesodermal cell | 9.61e-09 | 121 |
stem cell | 1.11e-08 | 441 |
muscle precursor cell | 1.27e-08 | 58 |
myoblast | 1.27e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.27e-08 | 58 |
smooth muscle cell | 6.37e-08 | 43 |
smooth muscle myoblast | 6.37e-08 | 43 |
electrically responsive cell | 7.93e-08 | 61 |
electrically active cell | 7.93e-08 | 61 |
stromal cell | 2.16e-07 | 28 |
preadipocyte | 6.82e-07 | 12 |
mesenchymal stem cell of adipose | 8.78e-07 | 8 |
cardiocyte | 9.56e-07 | 16 |