FFCP PHASE1:Hg19::chr2:216236755..216236764,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=397bp_to_ENST00000485567_5end | |association_with_transcript=397bp_to_ENST00000485567_5end | ||
|cluster_id=chr2:216236755..216236764,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_75_at_FN1_5end | |description=CAGE_peak_75_at_FN1_5end | ||
|id=chr2:216236755..216236764,- | |id=chr2:216236755..216236764,- | ||
|ontology_enrichment_celltype=CL:0002334;1.98e-16;12!CL:0002580;1.75e-13;3!CL:0002579;4.30e-13;3!CL:0002541;4.76e-07;3 | |ontology_enrichment_celltype=CL:0000055!1.89e-24!180;CL:0000057!1.22e-17!75;CL:0002371!3.10e-15!591;CL:0000680!5.33e-14!57;CL:0000056!5.33e-14!57;CL:0000355!5.33e-14!57;CL:0000144!3.32e-13!625;CL:0000187!4.18e-13!54;CL:0002334!6.54e-13!12;CL:0000048!5.14e-12!430;CL:0000183!6.48e-12!59;CL:0000723!9.85e-12!436;CL:0000034!6.95e-11!444;CL:0000393!8.94e-11!60;CL:0000211!8.94e-11!60;CL:0000548!7.45e-10!679;CL:0000004!7.45e-10!679;CL:0000255!7.45e-10!679;CL:0000012!1.37e-09!682;CL:0000192!1.84e-08!42;CL:0000514!1.84e-08!42;CL:0000359!1.68e-07!32;CL:0002494!3.22e-07!16;CL:0000222!7.95e-07!119;CL:0000220!9.50e-07!246 | ||
| | |ontology_enrichment_celltype_v019=CL:0002334;1.98e-16;12!CL:0002580;1.75e-13;3!CL:0002579;4.30e-13;3!CL:0002541;4.76e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.13e-16,12;CL:0002580,1.08e-13,3;CL:0002579,9.11e-13,3;CL:0000057,1.26e-07,76;CL:0002541,4.85e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003688;3.34e-11;6!UBERON:0002358;3.34e-11;6!UBERON:0003684;3.34e-11;6!UBERON:0001178;3.34e-11;6!UBERON:0005406;6.16e-10;2!UBERON:0004457;1.73e-07;9!UBERON:0000042;1.73e-07;9!UBERON:0003124;4.76e-07;3!UBERON:0000920;4.76e-07;3!UBERON:0005631;5.06e-07;10!UBERON:0000158;5.06e-07;10 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.68e-17!83;UBERON:0002329!6.68e-17!83;UBERON:0003077!6.68e-17!83;UBERON:0003059!6.68e-17!83;UBERON:0007282!6.68e-17!83;UBERON:0009618!6.68e-17!83;UBERON:0007285!6.68e-17!83;UBERON:0004290!8.76e-14!70;UBERON:0000486!4.71e-13!82;UBERON:0001134!2.34e-12!61;UBERON:0002036!2.34e-12!61;UBERON:0003082!2.34e-12!61;UBERON:0002385!1.27e-11!63;UBERON:0001015!1.27e-11!63;UBERON:0000383!1.27e-11!63;UBERON:0005256!1.78e-10!143;UBERON:0004872!4.79e-09!84;UBERON:0002100!8.25e-09!216;UBERON:0002049!2.03e-08!79;UBERON:0007798!2.03e-08!79;UBERON:0004535!2.64e-08!110;UBERON:0001637!3.29e-08!42;UBERON:0003509!3.29e-08!42;UBERON:0004572!3.29e-08!42;UBERON:0001009!9.16e-08!113;UBERON:0003688!1.41e-07!6;UBERON:0002358!1.41e-07!6;UBERON:0003684!1.41e-07!6;UBERON:0001178!1.41e-07!6;UBERON:0004923!3.22e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.34e-11;6!UBERON:0002358;3.34e-11;6!UBERON:0003684;3.34e-11;6!UBERON:0001178;3.34e-11;6!UBERON:0005406;6.16e-10;2!UBERON:0004457;1.73e-07;9!UBERON:0000042;1.73e-07;9!UBERON:0003124;4.76e-07;3!UBERON:0000920;4.76e-07;3!UBERON:0005631;5.06e-07;10!UBERON:0000158;5.06e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.21e-11,6;UBERON:0002358,8.21e-11,6;UBERON:0003684,8.21e-11,6;UBERON:0001178,8.21e-11,6;UBERON:0005406,5.20e-10,2;UBERON:0000920,4.85e-07,3 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.563817616383885,1.0007329835313,0.893922188854576,3.48935409640147,0,0,0,0,0,0.218441372130172,1.05506791291381,0.37129905888014,0.994192127183747,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0.50133791063589,0.289693037921647,13.5198610998687,14.1124112387764,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,1.62028389576352,0,0,0,0,0,0.366403487860815,0,0,0,2.98183171017191,0.633152558322899,2.51577443545116,2.29469296599051,0.354668382198357,0.560677600142307,0,1.2333377420858,0,0.538842688278752,0.163461903113459,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.597794722207204,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,0.150238058906597,0.226864366320042,0.358779271377724,0,0.847727604638247,0,0.103052529238439,1.8034837803194,0,1.18143432568886,0.487185025805993,0.757301322732344,0.460249493211497,0.80823028409406,1.42003837006646,0,0.67824236924195,0.193260853163297,0,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,1.690605505112,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,1.15825045334063,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.623912584592421,1.42743191037729,0.946214490203608,0.819989904948992,0.601892199455438,0,0,0,0.921845842708516,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.604780586659361,2.48107807818777,2.76231551918512,1.68396056659844,1.02511319404561,2.04682899626681,1.28683136914886,2.96836132889982,0.462629081407967,0.532685175939381,0.246381468041427,0.519254429183621,0.464841513839837,0.120859449591622,0.40101294060657,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.770243085573222,0.614014698904518,0.413509717453592,0.107420244868274,0.870100163485371,0.511359764496605,0.0890320356467374,0.991709492165869,0.192190067365106,0.382838137483752,0.30347334256665,0,2.83331112147576,0.6970372701606,0.924100740528266,0,0,0,0.286249773483982,0.744316738719335,0.316379424718726,0.38126038784765,0.511795582622668,0,0.636406495851874,0,0.359744915166629,0.274537029736055,0,0.202182481573316,1.58510321173008,0,0,0,1.05650146756755,0,0,2.26016233240486,0,0,0.438450885253763,0.578775534266688,1.9676842561399,0.405820753925408,0,0,0.143411352204052,0.196498082026242,1.07001315444375,0,0.422215270595328,0.987884678879706,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,0.614321404198464,0,0,1.44701316529778,0,0,0,0,0,0,0,4.97663340258892,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,13.3980487087406,0.457987967009312,21.854425816764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0.326587360109409,0,0,1.70388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.597019211547496,0.467426619694449,0.554805861502613,1.32582103692562,0.50313580350515,0,0.686520205190771,0.756154618816195,0.466311601748341,0.295710299979268,0.159296767163702,0,0.310525913752519,1.24411862352257,1.32920857278997,1.04349012362347,0,0,0.813741466409323,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.471797825567689,0,0,0,0,0,0.954013051960256,0,0,1.05802783107205,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,2.11693525095465,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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|short_description=p75@FN1 | |short_description=p75@FN1 | ||
}} | }} |
Latest revision as of 01:56, 20 September 2015
Short description: | p75@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_75_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 397bp_to_ENST00000485567_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.13e-16 | 12 |
preadipocyte of the breast | 1.08e-13 | 3 |
omentum preadipocyte | 9.11e-13 | 3 |
fibroblast | 1.26e-07 | 76 |
chorionic membrane mesenchymal stem cell | 4.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.21e-11 | 6 |
peritoneum | 8.21e-11 | 6 |
abdominal cavity | 8.21e-11 | 6 |
visceral peritoneum | 8.21e-11 | 6 |
perirenal fat | 5.20e-10 | 2 |
egg chorion | 4.85e-07 | 3 |