FFCP PHASE1:Hg19::chr6:118228365..118228376,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:118228365..118228376,+
|short_description=p5@SLC35F1
|description=CAGE_peak_5_at_SLC35F1_5end
|association_with_transcript=-312bp_to_ENST00000360388,NM_001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222553 | |EntrezGene=222553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21483 | |HGNC=21483 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T1Q4 | |UniProt=Q5T1Q4 | ||
|association_with_transcript=-312bp_to_ENST00000360388,NM_001029858,uc003pxx.3_5end | |||
|cluster_id=chr6:118228365..118228376,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_SLC35F1_5end | |||
|id=chr6:118228365..118228376,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.03e-10!5;CL:0000047!9.07e-10!8;CL:0002319!2.47e-09!25;CL:0000540!4.07e-09!6;CL:0000031!4.07e-09!6;CL:0000404!4.07e-09!6;CL:0002605!3.94e-08!3;CL:0000133!5.78e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.22e-17;3!CL:0000128;1.16e-07;7!CL:0000126;1.16e-07;7!CL:0000127;1.16e-07;7!CL:0002319;6.16e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.70e-17,3;CL:0000128,8.91e-08,7;CL:0000126,8.91e-08,7;CL:0000127,8.91e-08,7;CL:0002453,8.91e-08,7;CL:0002319,5.31e-07,25;CL:0000047,6.05e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;8.38e-59;25!UBERON:0000203;8.38e-59;25!UBERON:0001869;8.59e-55;32!UBERON:0001893;1.19e-51;34!UBERON:0003528;3.36e-51;34!UBERON:0002020;3.36e-51;34!UBERON:0002791;4.44e-51;32!UBERON:0001950;8.52e-50;20!UBERON:0002619;3.26e-45;22!UBERON:0002780;2.25e-35;41!UBERON:0001890;2.25e-35;41!UBERON:0000200;8.08e-34;6!UBERON:0000955;8.74e-28;68!UBERON:0001017;9.56e-26;75!UBERON:0000073;1.84e-25;53!UBERON:0002616;1.84e-25;53!UBERON:0001870;1.31e-17;3!UBERON:0001016;2.37e-17;83!UBERON:0001871;4.43e-13;6!UBERON:0002771;1.86e-12;2!UBERON:0002702;1.86e-12;2!UBERON:0001872;5.23e-11;5!UBERON:0002021;7.97e-11;5!UBERON:0005383;2.50e-08;3!UBERON:0005382;2.50e-08;3!UBERON:0011216;4.45e-08;132!UBERON:0002581;2.89e-07;1!UBERON:0002902;7.34e-07;1!UBERON:0002022;7.34e-07;1!UBERON:0001874;7.34e-07;1!UBERON:0003112;7.34e-07;1!UBERON:0011158;7.34e-07;1!UBERON:0009899;7.34e-07;1!UBERON:0007190;7.34e-07;1!UBERON:0003128;7.34e-07;1!UBERON:0001703;7.34e-07;1!UBERON:0002241;7.34e-07;1 | |||
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| ||
|short_description=p5@SLC35F1 | |||
}} | }} |
Latest revision as of 02:29, 20 September 2015
Short description: | p5@SLC35F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC35F1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -312bp_to_ENST00000360388, NM_001029858, uc003pxx.3_5end |
EntrezGene: | SLC35F1 |
HGNC: | 21483 |
UniProt: | Q5T1Q4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.70e-17 | 3 |
oligodendrocyte | 8.91e-08 | 7 |
macroglial cell | 8.91e-08 | 7 |
astrocyte | 8.91e-08 | 7 |
oligodendrocyte precursor cell | 8.91e-08 | 7 |
neural cell | 5.31e-07 | 25 |
neuronal stem cell | 6.05e-07 | 8 |