FFCP PHASE1:Hg19::chr1:205313304..205313315,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000539253_5end | |association_with_transcript=0bp_to_ENST00000539253_5end | ||
|cluster_id=chr1:205313304..205313315,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_6_at_KLHDC8A_5end | |description=CAGE_peak_6_at_KLHDC8A_5end | ||
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|ontology_enrichment_celltype=CL:0000764!4.59e-07!2;CL:0000765!4.59e-07!2;CL:0000050!4.59e-07!2;CL:0000038!4.59e-07!2;CL:0000558!4.59e-07!2;CL:0000547!4.59e-07!2;CL:0000549!4.59e-07!2;CL:0000550!4.59e-07!2;CL:0000552!4.59e-07!2 | |ontology_enrichment_celltype=CL:0000764!4.59e-07!2;CL:0000765!4.59e-07!2;CL:0000050!4.59e-07!2;CL:0000038!4.59e-07!2;CL:0000558!4.59e-07!2;CL:0000547!4.59e-07!2;CL:0000549!4.59e-07!2;CL:0000550!4.59e-07!2;CL:0000552!4.59e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.29e-18;5!CL:0002321;7.75e-07;15 | |ontology_enrichment_celltype_v019=CL:0000333;1.29e-18;5!CL:0002321;7.75e-07;15 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.26e-08;3 | |ontology_enrichment_development_v019=UBERON:0006215;1.26e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;1.09e-15;6!DOID:171;8.27e-10;10!DOID:5409;8.85e-07;4 | |ontology_enrichment_disease_v019=DOID:169;1.09e-15;6!DOID:171;8.27e-10;10!DOID:5409;8.85e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:169,9.04e-16,6;DOID:171,7.40e-10,10;DOID:5409,9.11e-07,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;2.03e-45;2!UBERON:0002757;2.03e-45;2!UBERON:0010134;2.03e-45;2!UBERON:0005408;2.03e-45;2!UBERON:0001899;2.03e-45;2!UBERON:0003296;2.63e-23;4!UBERON:0010133;2.63e-23;4!UBERON:0002784;2.63e-23;4!UBERON:0000013;1.29e-18;5!UBERON:0002410;1.29e-18;5!UBERON:0001894;8.94e-14;7!UBERON:0000010;8.57e-11;8!UBERON:0002680;1.02e-10;9!UBERON:0001895;1.02e-10;9!UBERON:0000988;1.26e-08;3!UBERON:0004733;2.85e-08;12!UBERON:0002028;2.85e-08;12!UBERON:0004732;1.05e-07;13!UBERON:0000073;1.22e-07;53!UBERON:0002616;1.22e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0001905;2.03e-45;2!UBERON:0002757;2.03e-45;2!UBERON:0010134;2.03e-45;2!UBERON:0005408;2.03e-45;2!UBERON:0001899;2.03e-45;2!UBERON:0003296;2.63e-23;4!UBERON:0010133;2.63e-23;4!UBERON:0002784;2.63e-23;4!UBERON:0000013;1.29e-18;5!UBERON:0002410;1.29e-18;5!UBERON:0001894;8.94e-14;7!UBERON:0000010;8.57e-11;8!UBERON:0002680;1.02e-10;9!UBERON:0001895;1.02e-10;9!UBERON:0000988;1.26e-08;3!UBERON:0004733;2.85e-08;12!UBERON:0002028;2.85e-08;12!UBERON:0004732;1.05e-07;13!UBERON:0000073;1.22e-07;53!UBERON:0002616;1.22e-07;53 | ||
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| ||
|short_description=p6@KLHDC8A | |short_description=p6@KLHDC8A | ||
}} | }} |
Latest revision as of 02:42, 20 September 2015
Short description: | p6@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KLHDC8A_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000539253_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.04e-16 | 6 |
neuroectodermal tumor | 7.40e-10 | 10 |
lung small cell carcinoma | 9.11e-07 | 4 |