FFCP PHASE1:Hg19::chr1:205313604..205313620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-294bp_to_ENST00000539253_5end | |association_with_transcript=-294bp_to_ENST00000539253_5end | ||
|cluster_id=chr1:205313604..205313620,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_8_at_KLHDC8A_5end | |description=CAGE_peak_8_at_KLHDC8A_5end | ||
|id=chr1:205313604..205313620,- | |id=chr1:205313604..205313620,- | ||
|ontology_enrichment_celltype=CL:0000764!6.63e-10!2;CL:0000765!6.63e-10!2;CL:0000050!6.63e-10!2;CL:0000038!6.63e-10!2;CL:0000558!6.63e-10!2;CL:0000547!6.63e-10!2;CL:0000549!6.63e-10!2;CL:0000550!6.63e-10!2;CL:0000552!6.63e-10!2;CL:0000242!5.70e-09!2 | |ontology_enrichment_celltype=CL:0000764!6.63e-10!2;CL:0000765!6.63e-10!2;CL:0000050!6.63e-10!2;CL:0000038!6.63e-10!2;CL:0000558!6.63e-10!2;CL:0000547!6.63e-10!2;CL:0000549!6.63e-10!2;CL:0000550!6.63e-10!2;CL:0000552!6.63e-10!2;CL:0000242!5.70e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;8.82e-51;2!CL:0000558;8.82e-51;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.82e-51,2;CL:0000765,8.82e-51,2;CL:0000050,8.82e-51,2;CL:0000038,8.82e-51,2;CL:0000558,8.82e-51,2;CL:0000547,8.82e-51,2;CL:0000549,8.82e-51,2;CL:0000550,8.82e-51,2;CL:0000552,8.82e-51,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.50e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p8@KLHDC8A | |short_description=p8@KLHDC8A | ||
}} | }} |
Latest revision as of 02:46, 20 September 2015
Short description: | p8@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KLHDC8A_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -294bp_to_ENST00000539253_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.82e-51 | 2 |
erythroblast | 8.82e-51 | 2 |
megakaryocyte-erythroid progenitor cell | 8.82e-51 | 2 |
erythroid progenitor cell | 8.82e-51 | 2 |
reticulocyte | 8.82e-51 | 2 |
proerythroblast | 8.82e-51 | 2 |
basophilic erythroblast | 8.82e-51 | 2 |
polychromatophilic erythroblast | 8.82e-51 | 2 |
orthochromatic erythroblast | 8.82e-51 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.44e-17 | 6 |
rhombic lip | 1.44e-17 | 6 |
pineal body | 1.37e-13 | 2 |
regional part of epithalamus | 1.37e-13 | 2 |
secretory circumventricular organ | 1.37e-13 | 2 |
circumventricular organ | 1.37e-13 | 2 |
epithalamus | 1.37e-13 | 2 |
regional part of metencephalon | 4.67e-12 | 9 |
metencephalon | 4.67e-12 | 9 |
future metencephalon | 4.67e-12 | 9 |
segmental subdivision of hindbrain | 2.77e-09 | 12 |
hindbrain | 2.77e-09 | 12 |
presumptive hindbrain | 2.77e-09 | 12 |
segmental subdivision of nervous system | 1.22e-08 | 13 |
posterior neural tube | 1.31e-07 | 15 |
chordal neural plate | 1.31e-07 | 15 |
gland of diencephalon | 1.92e-07 | 4 |
neuroendocrine gland | 1.92e-07 | 4 |
regional part of diencephalon | 1.92e-07 | 4 |