FFCP PHASE1:Hg19::chr6:118972685..118972768,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:118972685..118972768,- to FFCP PHASE1:Hg19::chr6:118972685..118972768,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=387119 | |EntrezGene=387119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21638 | |HGNC=21638 | ||
|TSSclassifier=strong | |||
|UniProt=G3V0H3,Q3ZCQ5,Q5SZL2 | |UniProt=G3V0H3,Q3ZCQ5,Q5SZL2 | ||
|association_with_transcript=251bp_to_ENST00000419517,NM_001042475,NM_206921,uc003pxz.1,uc003pyb.2_5end | |||
|cluster_id=chr6:118972685..118972768,- | |||
|description=CAGE_peak_1_at_CEP85L_5end | |||
|id=chr6:118972685..118972768,- | |||
|ontology_enrichment_celltype=CL:0000738!1.30e-09!140;CL:0002393!6.98e-07!9;CL:0002397!6.98e-07!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.49e-10,136;CL:0002393,6.97e-07,9;CL:0002397,6.97e-07,9;CL:0002087,7.32e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-27!115;UBERON:0001049!1.50e-17!57;UBERON:0005068!1.50e-17!57;UBERON:0006241!1.50e-17!57;UBERON:0007135!1.50e-17!57;UBERON:0001017!3.01e-16!82;UBERON:0000073!2.34e-15!94;UBERON:0001016!2.34e-15!94;UBERON:0002616!2.35e-15!59;UBERON:0000955!1.56e-14!69;UBERON:0006238!1.56e-14!69;UBERON:0005743!1.57e-14!86;UBERON:0003080!1.61e-13!42;UBERON:0002780!3.36e-13!41;UBERON:0001890!3.36e-13!41;UBERON:0006240!3.36e-13!41;UBERON:0002020!1.09e-10!34;UBERON:0003528!1.09e-10!34;UBERON:0001893!1.66e-10!34;UBERON:0002791!3.12e-10!33;UBERON:0001869!9.46e-10!32;UBERON:0002346!6.83e-09!90;UBERON:0003075!1.18e-08!86;UBERON:0007284!1.18e-08!86;UBERON:0002619!8.60e-08!22;UBERON:0000956!1.56e-07!25;UBERON:0000203!1.56e-07!25;UBERON:0001950!3.44e-07!20;UBERON:0000153!4.36e-07!129;UBERON:0007811!4.36e-07!129;UBERON:0002390!5.12e-07!102;UBERON:0003061!5.12e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.65e-10;41!UBERON:0001890;5.65e-10;41!UBERON:0000073;1.79e-09;53!UBERON:0002616;1.79e-09;53!UBERON:0002791;8.00e-09;32!UBERON:0003528;9.55e-09;34!UBERON:0002020;9.55e-09;34!UBERON:0001893;1.19e-08;34!UBERON:0001869;1.37e-08;32!UBERON:0007023;3.56e-08;114!UBERON:0002619;1.33e-07;22!UBERON:0000956;2.84e-07;25!UBERON:0000203;2.84e-07;25!UBERON:0000955;3.70e-07;68!UBERON:0001016;4.25e-07;83!UBERON:0001950;5.29e-07;20!UBERON:0001017;8.83e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.35e-27,114;UBERON:0001049,3.19e-17,56;UBERON:0005068,3.19e-17,56;UBERON:0006241,3.19e-17,56;UBERON:0007135,3.19e-17,56;UBERON:0001016,1.05e-16,89;UBERON:0001017,6.24e-16,81;UBERON:0000073,6.33e-16,53;UBERON:0002616,6.33e-16,53;UBERON:0000955,3.22e-14,68;UBERON:0006238,3.22e-14,68;UBERON:0002780,3.36e-13,41;UBERON:0001890,3.36e-13,41;UBERON:0003080,3.36e-13,41;UBERON:0006240,3.36e-13,41;UBERON:0003528,1.09e-10,34;UBERON:0002020,1.09e-10,34;UBERON:0001893,1.66e-10,34;UBERON:0002791,6.24e-10,32;UBERON:0001869,9.45e-10,32;UBERON:0002346,1.18e-09,86;UBERON:0003075,2.01e-09,82;UBERON:0007284,2.01e-09,82;UBERON:0002390,6.21e-08,98;UBERON:0003061,6.21e-08,98;UBERON:0002619,8.59e-08,22;UBERON:0000956,1.55e-07,25;UBERON:0000203,1.55e-07,25;UBERON:0002193,1.92e-07,108;UBERON:0001950,3.44e-07,20 | |||
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| ||
|short_description=p1@CEP85L | |||
}} | }} |
Latest revision as of 02:46, 20 September 2015
Short description: | p1@CEP85L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEP85L_5end |
Coexpression cluster: | NA |
Association with transcript: | 251bp_to_ENST00000419517, NM_001042475, NM_206921, uc003pxz.1, uc003pyb.2_5end |
EntrezGene: | CEP85L |
HGNC: | 21638 |
UniProt: | G3V0H3Q3ZCQ5Q5SZL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.49e-10 | 136 |
intermediate monocyte | 6.97e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.97e-07 | 9 |
nongranular leukocyte | 7.32e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.35e-27 | 114 |
neural tube | 3.19e-17 | 56 |
neural rod | 3.19e-17 | 56 |
future spinal cord | 3.19e-17 | 56 |
neural keel | 3.19e-17 | 56 |
nervous system | 1.05e-16 | 89 |
central nervous system | 6.24e-16 | 81 |
regional part of nervous system | 6.33e-16 | 53 |
regional part of brain | 6.33e-16 | 53 |
brain | 3.22e-14 | 68 |
future brain | 3.22e-14 | 68 |
regional part of forebrain | 3.36e-13 | 41 |
forebrain | 3.36e-13 | 41 |
anterior neural tube | 3.36e-13 | 41 |
future forebrain | 3.36e-13 | 41 |
brain grey matter | 1.09e-10 | 34 |
gray matter | 1.09e-10 | 34 |
telencephalon | 1.66e-10 | 34 |
regional part of telencephalon | 6.24e-10 | 32 |
cerebral hemisphere | 9.45e-10 | 32 |
neurectoderm | 1.18e-09 | 86 |
neural plate | 2.01e-09 | 82 |
presumptive neural plate | 2.01e-09 | 82 |
hematopoietic system | 6.21e-08 | 98 |
blood island | 6.21e-08 | 98 |
regional part of cerebral cortex | 8.59e-08 | 22 |
cerebral cortex | 1.55e-07 | 25 |
pallium | 1.55e-07 | 25 |
hemolymphoid system | 1.92e-07 | 108 |
neocortex | 3.44e-07 | 20 |