FFCP PHASE1:Hg19::chr1:205325698..205325721,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460687_5end | |association_with_transcript=0bp_to_ENST00000460687_5end | ||
|cluster_id=chr1:205325698..205325721,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_5_at_KLHDC8A_5end | |description=CAGE_peak_5_at_KLHDC8A_5end | ||
|id=chr1:205325698..205325721,- | |id=chr1:205325698..205325721,- | ||
|ontology_enrichment_celltype=CL:0000047!9.09e-27!8;CL:0000540!2.96e-18!6;CL:0000031!2.96e-18!6;CL:0000404!2.96e-18!6;CL:0002319!1.13e-14!25;CL:0000133!1.12e-09!59;CL:0002322!1.08e-08!5;CL:0000221!1.21e-07!71 | |ontology_enrichment_celltype=CL:0000047!9.09e-27!8;CL:0000540!2.96e-18!6;CL:0000031!2.96e-18!6;CL:0000404!2.96e-18!6;CL:0002319!1.13e-14!25;CL:0000133!1.12e-09!59;CL:0002322!1.08e-08!5;CL:0000221!1.21e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.26e-31;2!CL:0002319;2.38e-09;25!CL:0000123;6.67e-09;2!CL:0000242;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.88e-18,8;CL:0002319,2.25e-09,25;CL:0000242,5.49e-09,2;CL:0000133,7.99e-09,59;CL:0000221,3.19e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.78e-16;1!UBERON:0009117;4.73e-07;10!UBERON:0005564;4.73e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.55e-15!94;UBERON:0001016!6.55e-15!94;UBERON:0001017!3.60e-14!82;UBERON:0005743!2.49e-13!86;UBERON:0005162!9.82e-10!2;UBERON:0000122!9.82e-10!2;UBERON:0004121!3.65e-08!169;UBERON:0000924!7.27e-08!173;UBERON:0006601!7.27e-08!173;UBERON:0001049!9.16e-07!57;UBERON:0005068!9.16e-07!57;UBERON:0006241!9.16e-07!57;UBERON:0007135!9.16e-07!57 | |ontology_enrichment_uberon=UBERON:0000073!6.55e-15!94;UBERON:0001016!6.55e-15!94;UBERON:0001017!3.60e-14!82;UBERON:0005743!2.49e-13!86;UBERON:0005162!9.82e-10!2;UBERON:0000122!9.82e-10!2;UBERON:0004121!3.65e-08!169;UBERON:0000924!7.27e-08!173;UBERON:0006601!7.27e-08!173;UBERON:0001049!9.16e-07!57;UBERON:0005068!9.16e-07!57;UBERON:0006241!9.16e-07!57;UBERON:0007135!9.16e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.78e-16;1!UBERON:0001785;1.78e-16;1!UBERON:0002464;1.78e-16;1!UBERON:0004904;1.78e-16;1!UBERON:0001021;1.78e-16;1!UBERON:0003714;6.67e-09;2!UBERON:0005162;6.67e-09;2!UBERON:0000122;6.67e-09;2!UBERON:0000010;8.45e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.93e-16,1;UBERON:0001785,1.93e-16,1;UBERON:0002464,1.93e-16,1;UBERON:0004904,1.93e-16,1;UBERON:0001021,1.93e-16,1;UBERON:0003902,1.93e-16,1;UBERON:0005425,1.93e-16,1;UBERON:0003714,6.94e-09,2;UBERON:0005162,6.94e-09,2;UBERON:0000122,6.94e-09,2;UBERON:0000010,8.60e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.464775771478074,1.45125477021519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9260688415659,1.30139853857622,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.30807107751954,0,0.173624994933292,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9580720867089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828678488687,0,0,1.42769420259154,0,0,0,0,0,0,0,2.1058891937792,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,1.82631744101899,0,0,0,0,3.48724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0,0,0.439762066981716,0,0,0.655678681511872,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0.252332849670158,0,0,0.305966489225945,0,1.01084389488329,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.464775771478074,1.45125477021519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9260688415659,1.30139853857622,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.30807107751954,0,0.173624994933292,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9580720867089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828678488687,0,0,1.42769420259154,0,0,0,0,0,0,0,2.1058891937792,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,1.82631744101899,0,0,0,0,3.48724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0,0,0.439762066981716,0,0,0.655678681511872,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0.252332849670158,0,0,0.305966489225945,0,1.01084389488329,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@KLHDC8A | |short_description=p5@KLHDC8A | ||
}} | }} |
Latest revision as of 02:48, 20 September 2015
Short description: | p5@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLHDC8A_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000460687_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.88e-18 | 8 |
neural cell | 2.25e-09 | 25 |
Merkel cell | 5.49e-09 | 2 |
neurectodermal cell | 7.99e-09 | 59 |
ectodermal cell | 3.19e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.93e-16 | 1 |
cranial nerve | 1.93e-16 | 1 |
nerve trunk | 1.93e-16 | 1 |
nerve connecting eye with brain | 1.93e-16 | 1 |
nerve | 1.93e-16 | 1 |
retinal neural layer | 1.93e-16 | 1 |
presumptive neural retina | 1.93e-16 | 1 |
neural tissue | 6.94e-09 | 2 |
multi cell component structure | 6.94e-09 | 2 |
neuron projection bundle | 6.94e-09 | 2 |
peripheral nervous system | 8.60e-08 | 8 |