FFCP PHASE2:Hg19::chr14:50864006..50864025,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8814 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1781 |TSSclass...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1781 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q00532 | ||
|association_with_transcript=96bp_to_ENST00000216378_5end | |association_with_transcript=96bp_to_ENST00000216378_5end | ||
|cluster_id=chr14:50864006..50864025,- | |cluster_id=chr14:50864006..50864025,- | ||
Latest revision as of 03:39, 20 September 2015
| Short description: | p3@CDKL1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_CDKL1_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 96bp_to_ENST00000216378_5end |
| EntrezGene: | CDKL1 |
| HGNC: | 1781 |
| UniProt: | Q00532 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@CDKL1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 1.64e-73 | 22 |
| neocortex | 2.39e-72 | 20 |
| cerebral hemisphere | 5.11e-67 | 32 |
| cerebral cortex | 1.63e-64 | 25 |
| pallium | 1.63e-64 | 25 |
| telencephalon | 6.80e-63 | 34 |
| regional part of telencephalon | 7.93e-61 | 32 |
| brain grey matter | 4.54e-57 | 34 |
| gray matter | 4.54e-57 | 34 |
| regional part of forebrain | 1.49e-51 | 41 |
Showing 1 to 10 of 50 entries
