FFCP PHASE1:Hg19::chr19:5680566..5680571,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125988 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33702 | |||
|TSSclassifier=strong | |||
|UniProt=Q5XKP0 | |||
|association_with_transcript=339bp_to_ENST00000309324,NM_205767,uc002mch.1,uc002mci.1_5end | |||
|cluster_id=chr19:5680566..5680571,- | |||
|description=CAGE_peak_3_at_C19orf70_5end | |||
|id=chr19:5680566..5680571,- | |||
|ontology_enrichment_celltype=CL:0002321!5.58e-10!248;CL:0000220!6.18e-10!246;CL:0000055!3.72e-09!180;CL:0000680!7.57e-09!57;CL:0000056!7.57e-09!57;CL:0000355!7.57e-09!57;CL:0000393!1.31e-08!60;CL:0000211!1.31e-08!60;CL:0000183!1.53e-08!59;CL:0000066!2.41e-08!254;CL:0000187!2.91e-08!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.03e-10,250;CL:0000680,7.68e-10,58;CL:0000056,7.68e-10,58;CL:0000355,7.68e-10,58;CL:0000393,3.61e-09,61;CL:0000211,3.61e-09,61;CL:0000187,4.15e-09,55;CL:0000066,1.92e-07,253;CL:0000192,9.79e-07,43;CL:0000514,9.79e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.88e-15!143;UBERON:0003104!4.32e-14!238;UBERON:0009142!4.32e-14!238;UBERON:0000481!4.66e-14!347;UBERON:0002100!2.38e-13!216;UBERON:0000486!3.31e-12!82;UBERON:0000914!1.66e-11!83;UBERON:0002329!1.66e-11!83;UBERON:0003077!1.66e-11!83;UBERON:0003059!1.66e-11!83;UBERON:0007282!1.66e-11!83;UBERON:0009618!1.66e-11!83;UBERON:0007285!1.66e-11!83;UBERON:0000475!5.27e-11!365;UBERON:0004290!9.88e-11!70;UBERON:0002385!1.73e-10!63;UBERON:0001015!1.73e-10!63;UBERON:0000383!1.73e-10!63;UBERON:0001134!2.45e-10!61;UBERON:0002036!2.45e-10!61;UBERON:0003082!2.45e-10!61;UBERON:0000483!6.05e-10!309;UBERON:0000119!9.60e-10!312;UBERON:0000490!2.39e-08!138;UBERON:0006554!1.76e-07!44;UBERON:0001008!7.22e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.61e-07;30!UBERON:0001008;2.61e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.10e-15,160;UBERON:0009142,1.10e-15,160;UBERON:0005256,1.07e-12,122;UBERON:0000486,1.86e-12,83;UBERON:0002100,4.56e-12,199;UBERON:0001134,1.11e-11,62;UBERON:0002036,1.11e-11,62;UBERON:0003082,1.11e-11,62;UBERON:0007503,1.44e-11,78;UBERON:0002385,1.63e-11,64;UBERON:0001015,1.63e-11,64;UBERON:0000383,1.63e-11,64;UBERON:0007524,2.12e-11,73;UBERON:0002329,2.37e-11,71;UBERON:0003059,2.37e-11,71;UBERON:0007282,2.37e-11,71;UBERON:0004290,2.37e-11,71;UBERON:0009618,2.37e-11,71;UBERON:0003077,5.83e-11,72;UBERON:0007285,5.83e-11,72;UBERON:0006554,2.89e-09,47;UBERON:0001008,7.89e-09,48;UBERON:0000490,4.68e-08,148 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.12763523276777,1.0007329835313,0.446961094427288,1.74467704820074,0,0.631719873426831,1.56711376919903,1.22866968250754,2.09340350391728,1.74753097704138,2.63766978228454,2.22779435328084,0.662794751455832,0,3.01347264011988,0.730310090387373,0.975865597581014,0.123121058076788,0.816002764977012,3.13454721478088,1.43117993565528,1.09499540058307,1.12988375635323,0.458480434487708,0.410502947249729,0.393553906568396,0,0,0.464448369948228,3.67768489791571,1.204823675113,0.739508020333575,0.0774672005803016,0.568676929949686,1.17440175733939,0,0,0.217010870715852,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.637812899895131,0.209658645508376,0,0.450530678524519,0,1.42506371870624,0.59675003159727,0.547992461293902,1.75996244461323,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0.977766799900771,0.473447805734733,1.94826728407911,0.334231370655521,0.589211814949674,0.886135578334485,0.270803863765016,0.896639238079726,1.1705341280389,0.822189523018381,0.276350017785848,0.289803085735052,0.444859689486181,0.267540828089713,2.09071047609954,0.679856056185397,1.14966148080576,0.68725489096526,0.253019692019503,0.637130828648193,1.95325036156926,0.950452044448374,0.301150238155546,0.76791966692651,1.24930726552346,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,2.68280343881454,1.53435074212236,0.722878304769133,0,1.01392563272577,0.795285947051099,1.94653948121054,1.13441780596881,2.21729397462564,1.14185221401064,1.24430121722827,1.45718115317017,2.96627554227544,0.324547393654683,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0.993812036833525,0,0.694281003215189,2.82653970962005,2.09749718104953,0.825354125820202,0.417989933073621,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0.976248230192678,0,0,0.17859945656816,1.34717623575702,1.46394924628319,1.53316637465883,0,0.732806975721629,0,0,1.74437620857014,1.98788780678127,2.02608818663328,0.926864265692532,0,1.06400514659507,1.68203280042692,2.1349799145941,3.45334567784024,0.933633106199299,0.404132016209064,0.326923806226917,0.151357427644931,0,0.937285727335186,0.624320153660641,3.99330275081114,1.49448680551801,0.587172493218824,0.647491777472526,0.561803226808994,0.816616685019573,0.982674538494144,0.929932030581889,1.18800285728205,1.7308685049499,0,2.87447256726495,0.505008341862199,0.750711119231785,0.277064115484183,0.438977620880838,1.22595118319608,1.80285670687916,2.26864366320042,0,0.427114777637135,1.27159140695737,0.300091096084402,0.206105058476878,0,0.744467425326359,0.506328996723799,0.292311015483596,0.252433774244115,0.920498986422993,0.161646056818812,0.355009592516614,0.906768884048762,1.52604533079439,1.93260853163297,2.45471508531751,1.14721838155602,1.58565817968474,0.397589304964456,0.348581828608555,0.518305275076852,0.504641701751257,0.36497735907583,1.56449532329816,0.643240938192885,6.90674606762403,1.39310378409594,2.16563844500876,1.53798840051797,1.51726221070292,1.92808823906786,1.21323370005633,1.08939722046203,2.37270619111097,2.42696354688296,1.17732879075208,1.92373578473195,0,1.40241773803446,2.8810180793198,2.94017422771084,1.26755034821831,0.982827216677626,0.590789906681404,1.32438929824395,0.614942192715568,0.857839051492628,2.19500570817251,4.49607013030478,1.70899253099772,1.29623823221941,0.651616610620649,2.07986957055916,0,0.927443239800615,1.17408694235822,0.433099343283221,0,0.380508304469197,1.58040879591855,0.858486162094873,0.246217006087397,0.234004265139238,0.445893486866185,5.62403003920662,1.51183915378974,1.27597587518148,1.07470227243418,0.871901815541886,2.30029607499127,0,0.176096868026452,0.829312462163088,0.144119953416961,0.12624243342638,1.0159663086747,1.52795370223311,3.51652341630141,1.71072446022705,1.43958489784653,1.50171528921959,0,0.448524337381443,0.43596006883328,0.8800594298514,1.29271715757778,7.15312891703765,2.535908257668,0.531876233169741,0,1.02882949704857,0,2.39779961114489,1.28680194292333,1.08524321078289,5.76268235746538,1.62868092146868,1.42156779497018,1.58390374586686,1.80863626235752,2.61460037580088,1.19967589418468,1.2162378064119,0,0,0.718874566474748,0,2.85273810081437,2.02693829334611,1.02738161275192,1.43248770591916,0.560425719967636,0,0.215627574859517,0,0.508189248444927,0,2.31986643833309,1.00509759200609,1.27587750330633,0,0,0,0.736148950314839,1.50051156317903,1.08506009479894,0.831883446123229,1.07057393278297,0.630809660135739,1.05427273493442,2.70851489754947,0,6.2083842775503,0.664225598535437,1.65932251687533,0.781952530212746,1.37060810223918,1.02943027143257,0,0,0.106727557803444,3.03127571446259,1.66435439510497,2.72151263996712,0.496215615637554,1.07423381301644,1.40330047216537,1.66580894032411,1.53512174720011,1.447685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| |||
|short_description=p3@C19orf70 | |||
}} |
Latest revision as of 03:54, 20 September 2015
Short description: | p3@C19orf70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C19orf70_5end |
Coexpression cluster: | NA |
Association with transcript: | 339bp_to_ENST00000309324, NM_205767, uc002mch.1, uc002mci.1_5end |
EntrezGene: | C19orf70 |
HGNC: | 33702 |
UniProt: | Q5XKP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.03e-10 | 250 |
muscle precursor cell | 7.68e-10 | 58 |
myoblast | 7.68e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.68e-10 | 58 |
electrically responsive cell | 3.61e-09 | 61 |
electrically active cell | 3.61e-09 | 61 |
muscle cell | 4.15e-09 | 55 |
epithelial cell | 1.92e-07 | 253 |
smooth muscle cell | 9.79e-07 | 43 |
smooth muscle myoblast | 9.79e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.10e-15 | 160 |
entire embryonic mesenchyme | 1.10e-15 | 160 |
trunk mesenchyme | 1.07e-12 | 122 |
multilaminar epithelium | 1.86e-12 | 83 |
trunk | 4.56e-12 | 199 |
skeletal muscle tissue | 1.11e-11 | 62 |
striated muscle tissue | 1.11e-11 | 62 |
myotome | 1.11e-11 | 62 |
epithelial vesicle | 1.44e-11 | 78 |
muscle tissue | 1.63e-11 | 64 |
musculature | 1.63e-11 | 64 |
musculature of body | 1.63e-11 | 64 |
dense mesenchyme tissue | 2.12e-11 | 73 |
somite | 2.37e-11 | 71 |
presomitic mesoderm | 2.37e-11 | 71 |
presumptive segmental plate | 2.37e-11 | 71 |
dermomyotome | 2.37e-11 | 71 |
trunk paraxial mesoderm | 2.37e-11 | 71 |
paraxial mesoderm | 5.83e-11 | 72 |
presumptive paraxial mesoderm | 5.83e-11 | 72 |
urinary system structure | 2.89e-09 | 47 |
renal system | 7.89e-09 | 48 |
unilaminar epithelium | 4.68e-08 | 148 |