FFCP PHASE1:Hg19::chr1:206730535..206730549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83593 | |EntrezGene=83593 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17609 | |HGNC=17609 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000304534_5end | |association_with_transcript=42bp_to_ENST00000304534_5end | ||
|cluster_id=chr1:206730535..206730549,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_RASSF5_5end | |description=CAGE_peak_4_at_RASSF5_5end |
Latest revision as of 04:54, 20 September 2015
Short description: | p4@RASSF5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASSF5_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 42bp_to_ENST00000304534_5end |
EntrezGene: | RASSF5 |
HGNC: | 17609 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@RASSF5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.27e-121 | 168 |
hematopoietic cell | 8.14e-116 | 177 |
hematopoietic oligopotent progenitor cell | 1.75e-114 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-114 | 161 |
leukocyte | 6.79e-110 | 136 |
hematopoietic lineage restricted progenitor cell | 2.64e-88 | 120 |
nongranular leukocyte | 2.52e-87 | 115 |
myeloid cell | 4.21e-70 | 108 |
common myeloid progenitor | 4.21e-70 | 108 |
myeloid leukocyte | 1.15e-57 | 72 |
Showing 1 to 10 of 46 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.88e-61 | 98 |
blood island | 2.88e-61 | 98 |
hemolymphoid system | 1.65e-55 | 108 |
bone marrow | 2.72e-45 | 76 |
immune system | 2.35e-44 | 93 |
bone element | 4.46e-40 | 82 |
skeletal element | 3.00e-34 | 90 |
skeletal system | 2.42e-28 | 100 |
connective tissue | 7.58e-28 | 371 |
lateral plate mesoderm | 7.68e-16 | 203 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.89e-18 | 51 |
immune system cancer | 1.89e-18 | 51 |
leukemia | 1.33e-14 | 39 |
myeloid leukemia | 1.06e-10 | 31 |
Showing 1 to 4 of 4 entries