FFCP PHASE1:Hg19::chr10:98945648..98945657,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6585 | |EntrezGene=6585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11085 | |HGNC=11085 | ||
|TSSclassifier=strong | |||
|UniProt=O75093,Q5T0V2 | |UniProt=O75093,Q5T0V2 | ||
|association_with_transcript=19bp_to_ENST00000266058,ENST00000371041_5end | |association_with_transcript=19bp_to_ENST00000266058,ENST00000371041_5end | ||
|cluster_id=chr10:98945648..98945657,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_SLIT1_5end | |description=CAGE_peak_6_at_SLIT1_5end | ||
|id=chr10:98945648..98945657,- | |id=chr10:98945648..98945657,- | ||
|ontology_enrichment_celltype=CL:0000242!1.74e-08!2 | |ontology_enrichment_celltype=CL:0000242!1.74e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002553;4.22e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.45e-21,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.13e-55!34;UBERON:0003528!1.13e-55!34;UBERON:0001869!4.93e-55!32;UBERON:0002619!1.30e-54!22;UBERON:0001049!8.91e-54!57;UBERON:0005068!8.91e-54!57;UBERON:0006241!8.91e-54!57;UBERON:0007135!8.91e-54!57;UBERON:0001893!1.55e-51!34;UBERON:0001017!1.51e-48!82;UBERON:0002791!2.36e-48!33;UBERON:0001950!3.87e-48!20;UBERON:0000956!9.87e-48!25;UBERON:0000203!9.87e-48!25;UBERON:0005743!6.21e-46!86;UBERON:0000073!2.60e-43!94;UBERON:0001016!2.60e-43!94;UBERON:0000955!1.28e-42!69;UBERON:0006238!1.28e-42!69;UBERON:0002780!6.34e-42!41;UBERON:0001890!6.34e-42!41;UBERON:0006240!6.34e-42!41;UBERON:0002616!1.72e-41!59;UBERON:0003080!8.30e-41!42;UBERON:0003075!4.85e-38!86;UBERON:0007284!4.85e-38!86;UBERON:0002346!5.30e-36!90;UBERON:0003056!6.95e-29!61;UBERON:0004121!6.53e-25!169;UBERON:0007023!1.15e-24!115;UBERON:0000153!3.25e-24!129;UBERON:0007811!3.25e-24!129;UBERON:0000924!3.96e-24!173;UBERON:0006601!3.96e-24!173;UBERON:0000033!4.14e-24!123;UBERON:0001871!2.19e-22!7;UBERON:0000349!1.49e-18!5;UBERON:0000200!1.71e-15!6;UBERON:0000025!1.16e-14!194;UBERON:0003076!1.24e-13!15;UBERON:0003057!1.24e-13!15;UBERON:0001872!1.45e-12!5;UBERON:0002021!4.80e-12!5;UBERON:0002771!1.35e-11!3;UBERON:0002240!1.40e-11!3;UBERON:0000064!5.44e-11!219;UBERON:0000988!1.18e-10!3;UBERON:0002298!1.90e-10!8;UBERON:0002420!2.04e-10!9;UBERON:0007245!2.04e-10!9;UBERON:0010009!2.04e-10!9;UBERON:0010011!2.04e-10!9;UBERON:0000454!2.04e-10!9;UBERON:0004111!3.24e-10!241;UBERON:0002308!5.32e-10!9;UBERON:0000125!5.32e-10!9;UBERON:0000483!1.38e-09!309;UBERON:0000477!1.85e-09!286;UBERON:0000475!1.94e-09!365;UBERON:0000119!2.09e-09!312;UBERON:0000369!2.73e-09!4;UBERON:0002435!2.73e-09!4;UBERON:0000204!2.73e-09!4;UBERON:0010082!2.73e-09!4;UBERON:0001876!1.74e-08!2;UBERON:0001954!3.02e-08!2;UBERON:0003022!3.02e-08!2;UBERON:0002421!3.02e-08!2;UBERON:0002600!3.02e-08!2;UBERON:0002148!1.02e-07!2;UBERON:0009662!1.02e-07!2;UBERON:0005174!4.12e-07!5;UBERON:0001137!4.12e-07!5;UBERON:0004733!7.05e-07!12;UBERON:0002028!7.05e-07!12;UBERON:0007277!7.05e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.18e-25;34!UBERON:0001950;9.38e-24;20!UBERON:0001869;2.08e-23;32!UBERON:0002619;1.03e-21;22!UBERON:0002022;4.22e-21;1!UBERON:0001874;4.22e-21;1!UBERON:0007190;4.22e-21;1!UBERON:0002791;2.48e-20;32!UBERON:0000956;3.10e-19;25!UBERON:0000203;3.10e-19;25!UBERON:0003528;1.25e-18;34!UBERON:0002020;1.25e-18;34!UBERON:0001872;5.45e-17;5!UBERON:0002780;2.28e-15;41!UBERON:0001890;2.28e-15;41!UBERON:0000073;8.79e-13;53!UBERON:0002616;8.79e-13;53!UBERON:0000955;1.67e-12;68!UBERON:0001871;2.66e-12;6!UBERON:0001017;7.38e-09;75!UBERON:0001016;1.49e-08;83!UBERON:0005383;6.34e-08;3!UBERON:0005382;6.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.99e-29,32;UBERON:0001893,1.85e-27,34;UBERON:0001950,7.77e-24,20;UBERON:0002780,7.17e-23,41;UBERON:0001890,7.17e-23,41;UBERON:0003080,7.17e-23,41;UBERON:0006240,7.17e-23,41;UBERON:0002619,8.70e-22,22;UBERON:0002791,1.32e-21,32;UBERON:0002022,2.82e-21,1;UBERON:0001874,6.31e-21,1;UBERON:0007190,9.43e-21,1;UBERON:0003528,2.25e-20,34;UBERON:0002020,2.25e-20,34;UBERON:0000956,2.66e-19,25;UBERON:0000203,2.66e-19,25;UBERON:0000955,8.11e-18,68;UBERON:0006238,8.11e-18,68;UBERON:0000073,9.21e-18,53;UBERON:0002616,9.21e-18,53;UBERON:0001872,5.91e-17,5;UBERON:0001049,8.08e-17,56;UBERON:0005068,8.08e-17,56;UBERON:0006241,8.08e-17,56;UBERON:0007135,8.08e-17,56;UBERON:0003056,1.89e-15,61;UBERON:0001017,5.56e-15,81;UBERON:0001016,1.75e-13,89;UBERON:0001871,2.24e-12,6;UBERON:0003075,1.74e-11,82;UBERON:0007284,1.74e-11,82;UBERON:0002346,6.03e-11,86;UBERON:0010371,5.07e-09,104;UBERON:0005383,7.26e-08,3;UBERON:0005382,7.26e-08,3;UBERON:0010314,4.73e-07,132;UBERON:0004121,6.32e-07,171;UBERON:0000924,6.32e-07,171;UBERON:0006601,6.32e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949661939338181,0,0,0,0,0.288180834308212,0.114536596165916,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,1.88323625639876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0,0.110929051536852,0.310482014706917,0.276697269872462,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,1.60114149657094,0,0,0.834979926253974,0,0.159633859057151,0.41023272848151,0.756215088665154,0.622415272177961,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,1.01306376927592,0,0.206686796501184,1.14148458349032,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.72350050919134,0,0,0,1.09980912941201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,1.90376172534561,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949661939338181,0,0,0,0,0.288180834308212,0.114536596165916,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,1.88323625639876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0,0.110929051536852,0.310482014706917,0.276697269872462,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,1.60114149657094,0,0,0.834979926253974,0,0.159633859057151,0.41023272848151,0.756215088665154,0.622415272177961,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,1.01306376927592,0,0.206686796501184,1.14148458349032,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.72350050919134,0,0,0,1.09980912941201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,1.90376172534561,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p6@SLIT1 | |short_description=p6@SLIT1 | ||
}} | }} |
Latest revision as of 06:11, 20 September 2015
Short description: | p6@SLIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLIT1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 19bp_to_ENST00000266058, ENST00000371041_5end |
EntrezGene: | SLIT1 |
HGNC: | 11085 |
UniProt: | O75093Q5T0V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.45e-21 | 1 |