FFCP PHASE1:Hg19::chr10:99123608..99123611,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29100 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000465394_5end | |||
|cluster_id=chr10:99123608..99123611,- | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_4_at_RRP12_5end | |||
|id=chr10:99123608..99123611,- | |||
|ontology_enrichment_celltype=CL:0000548!7.15e-14!679;CL:0000004!7.15e-14!679;CL:0000255!7.15e-14!679;CL:0000012!1.77e-13!682;CL:0002371!1.19e-10!591;CL:0000055!1.70e-10!180;CL:0000003!9.73e-10!722;CL:0000144!1.17e-09!625;CL:0000183!3.20e-08!59;CL:0002321!5.12e-08!248;CL:0000220!5.22e-08!246;CL:0000680!8.30e-08!57;CL:0000056!8.30e-08!57;CL:0000355!8.30e-08!57;CL:0000187!2.21e-07!54;CL:0000393!4.42e-07!60;CL:0000211!4.42e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002596;1.90e-11;2!CL:0000192;3.79e-11;43!CL:0000359;2.29e-10;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.28e-14,43;CL:0000514,4.28e-14,43;CL:0000680,1.27e-11,58;CL:0000056,1.27e-11,58;CL:0000355,1.27e-11,58;CL:0002596,1.63e-11,2;CL:0000359,5.67e-11,32;CL:0000187,1.72e-10,55;CL:0000222,1.76e-10,121;CL:0000393,3.17e-09,61;CL:0000211,3.17e-09,61;CL:0002321,9.60e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;3.79e-11;43!CL:0000355;1.16e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!5.14e-10!238;UBERON:0009142!5.14e-10!238;UBERON:0005256!8.80e-10!143;UBERON:0000490!1.07e-09!138;UBERON:0000486!1.61e-09!82;UBERON:0000119!1.50e-08!312;UBERON:0000481!1.82e-08!347;UBERON:0004290!1.99e-08!70;UBERON:0000483!4.58e-08!309;UBERON:0000914!4.62e-08!83;UBERON:0002329!4.62e-08!83;UBERON:0003077!4.62e-08!83;UBERON:0003059!4.62e-08!83;UBERON:0007282!4.62e-08!83;UBERON:0009618!4.62e-08!83;UBERON:0007285!4.62e-08!83;UBERON:0002100!1.62e-07!216;UBERON:0002049!5.53e-07!79;UBERON:0007798!5.53e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0005396;1.90e-11;2!UBERON:0007500;7.57e-08;56!UBERON:0001981;7.57e-08;56!UBERON:0004537;7.57e-08;56!UBERON:0001043;8.43e-08;3!UBERON:0004573;3.57e-07;33!UBERON:0004571;3.57e-07;33!UBERON:0000055;8.58e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.71e-14,78;UBERON:0002329,2.20e-12,71;UBERON:0003059,2.20e-12,71;UBERON:0007282,2.20e-12,71;UBERON:0004290,2.20e-12,71;UBERON:0009618,2.20e-12,71;UBERON:0003077,3.62e-12,72;UBERON:0007285,3.62e-12,72;UBERON:0007524,5.88e-12,73;UBERON:0000486,1.12e-11,83;UBERON:0005396,1.63e-11,2;UBERON:0007500,1.86e-11,59;UBERON:0001981,1.86e-11,59;UBERON:0004537,1.86e-11,59;UBERON:0006965,1.86e-11,59;UBERON:0001134,1.06e-10,62;UBERON:0002036,1.06e-10,62;UBERON:0003082,1.06e-10,62;UBERON:0002385,2.77e-10,64;UBERON:0001015,2.77e-10,64;UBERON:0000383,2.77e-10,64;UBERON:0001637,7.70e-10,42;UBERON:0003509,7.70e-10,42;UBERON:0004572,7.70e-10,42;UBERON:0003914,1.11e-09,117;UBERON:0000055,1.37e-09,68;UBERON:0002049,1.73e-09,78;UBERON:0007798,1.73e-09,78;UBERON:0005256,4.67e-09,122;UBERON:0000490,7.48e-09,148;UBERON:0004872,1.02e-08,83;UBERON:0004573,2.01e-08,33;UBERON:0004571,2.01e-08,33;UBERON:0000119,6.48e-08,309;UBERON:0001043,7.64e-08,3;UBERON:0009143,7.64e-08,3;UBERON:0000483,2.86e-07,306;UBERON:0002100,3.98e-07,199;UBERON:0004535,4.96e-07,109;UBERON:0003104,6.27e-07,160;UBERON:0009142,6.27e-07,160;UBERON:0001009,9.21e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0.218441372130172,0,0.618831764800233,0.331397375727916,0,0,0,0,1.10808952269109,0,0.313454721478088,0.572471974262113,0.547497700291537,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0.542270404062111,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.44575660953827,0,0.289693037921647,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0,0.728590576585084,0,0,0,0,0,0,0,0.79504962946682,0,1.04142150482278,0,0,0.275118041940067,0,0,0,0,0.805658634218294,3.04108842287405,0,0.367663080345869,0,0.446498641420399,0,0,1.53316637465883,4.74632829784064,0.183201743930407,0,0,2.18047026071267,0,0.12663051166458,0,0,0.354668382198357,0,2.1349799145941,0,0,0.269421344139376,0.163461903113459,0.756787138224657,0,2.10889288650417,0.312160076830321,3.4228309292667,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0.61246251376468,0.245668634623536,0.309977343527296,0,0,0.910161361938026,0.718618141816238,1.0100166837244,0.250237039743928,0.277064115484183,0,0,0,0.567160915800105,0,0.427114777637135,0.423863802319124,0,0.412210116953756,0,0.37223371266318,0,0.292311015483596,0,0.184099797284599,0.484938170456436,0,0.302256294682921,0,0,0.545492241181669,0.860413786167011,0.121973706129595,0,0,0,0,1.09493207722749,1.56449532329816,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0.241011029883482,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,1.1240175325762,0,0.462942225792648,0.977424915930974,0,0,0.34779121492523,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.581267877027924,0,0,0,0,0,0,0,0,2.34434894420094,0,0,0,0,1.56983518083505,0,0.51336800074665,0,28.6125156681506,0,1.06375246633948,1.04007436911366,0.771622122786426,0,0,0.428933980974443,0.542621605391443,0,0.65147236858747,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,1.25342674267927,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.613457458595699,0,0.542530047399471,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0.553107505625109,0.521301686808497,0.783204629850962,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.821271560138091,0,0.464841513839837,0.120859449591622,0,0.0920809889358963,0.459257792658427,0.182091168006717,0.262248829918848,0.902399225814824,0.308061348417659,3.92174884588428,0,0.316654886678627,0,0.510281115829547,0,0,1.62567862526312,0,0.764628819135115,0,0.223874754722178,0.219259876645935,0.522870902049801,0.512900250232778,0.328014645699706,0,0,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0,0,2.7881490806424,0,1.06461206063404,3.47973196830029,0.74129687641568,0,0,0.632758849437452,0.190630193923825,1.535386747868,0,3.5002357271853,2.35484592059769,0.719489830333259,0,0.117812402345686,1.01091240786658,0,0.421258456238981,2.92580243453754,0,0,0.272999822815972,0,1.13008116620243,1.65409603063837,0,0,1.15755106853338,0,1.01455188481352,0,0.563391205064483,0.860468113224309,0.0982490410131212,0.7133421029625,0.354761064070598,0.211107635297664,0,3.41525856389144,0.349934720244983,0.673554789078584,0,2.17781969722645,0,1.29151611801369,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0.721346064882224,0.142283686696828,0.637705090915289,0,0.383010740264733,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0.614481528616916,0.447352215784832,0.667396566847634,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0.102268682502155,0.246169610922139,0,0.898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0.113942055847001,0,0.448788222048861,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0.635746315921515,0,0.163232808159148,0.565412285735763,0.432777279484182,0,0,0,0.296521128680622,0.247127877893006,0.313265848516366,0,0,0,0,0.391329237864179,0,0,0,0,0,0.450970258243478,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.435296032902013,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0.264768380074501,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0.80175617316141,0,0.288109595976299,0,0.471388069233591,0,0.313808538937,0.407992870545287,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.202210631562555,0.196854963029498,0.169346664131569,0,0,0.643012593860077,0.550157746388935,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,1.36869470307464,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37358282073117,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0.320075189082423,0.172214979660816,0,0,0.139879507719444,0,0,0,0.471797825567689,0,0,0.212574920101683,0,0,0.318004350653419,0.0788617450012534,0,0,0.6124909547064,0,0,0.159633859057151,0,0,0,0,0,0.196295437002051,0.353909170043221,0,0.231051332300676,0,0,0.397832444232549,0,0,0,0.261906694481422,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0.632054446930906,0.23248285073625,0.347716544605159,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0.399764623699716,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0.126698501011437,0,0,0,0.50141507858475,0.303114792872958,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p4@RRP12 | |||
}} |
Latest revision as of 06:20, 20 September 2015
Short description: | p4@RRP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RRP12_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | 12bp_to_ENST00000465394_5end |
EntrezGene: | RRP12 |
HGNC: | 29100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.28e-14 | 43 |
smooth muscle myoblast | 4.28e-14 | 43 |
muscle precursor cell | 1.27e-11 | 58 |
myoblast | 1.27e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.27e-11 | 58 |
smooth muscle cell of the carotid artery | 1.63e-11 | 2 |
vascular associated smooth muscle cell | 5.67e-11 | 32 |
muscle cell | 1.72e-10 | 55 |
mesodermal cell | 1.76e-10 | 121 |
electrically responsive cell | 3.17e-09 | 61 |
electrically active cell | 3.17e-09 | 61 |
embryonic cell | 9.60e-07 | 250 |