FFCP PHASE1:Hg19::chr10:99161003..99161028,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:99161003..99161028,-
|short_description=p2@RRP12
|description=CAGE_peak_2_at_RRP12_5end
|association_with_transcript=11bp_to_ENST00000315563_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23223 | |EntrezGene=23223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29100 | |HGNC=29100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000315563_5end | |||
|cluster_id=chr10:99161003..99161028,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_RRP12_5end | |||
|id=chr10:99161003..99161028,- | |||
|ontology_enrichment_celltype=CL:0002057!7.41e-27!42;CL:0000766!7.88e-24!76;CL:0000860!5.57e-23!45;CL:0000557!1.10e-20!71;CL:0000839!2.11e-19!70;CL:0002009!2.89e-19!65;CL:0000738!3.14e-19!140;CL:0000763!2.65e-18!112;CL:0000049!2.65e-18!112;CL:0002194!3.13e-18!63;CL:0000576!3.13e-18!63;CL:0000040!3.13e-18!63;CL:0000559!3.13e-18!63;CL:0000037!7.88e-18!172;CL:0000566!7.88e-18!172;CL:0000988!1.71e-16!182;CL:0002031!1.87e-16!124;CL:0002032!1.94e-16!165;CL:0000837!1.94e-16!165;CL:0002087!2.95e-15!119;CL:0000134!4.70e-07!358;CL:0002393!9.04e-07!9;CL:0002397!9.04e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.72e-20;33!CL:0002057;4.72e-20;33!CL:0000473;1.46e-17;39!CL:0000234;1.46e-17;39!CL:0000576;9.69e-14;48!CL:0000766;2.17e-13;69!CL:0000763;3.45e-07;100!CL:0000094;8.23e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.05e-28,48;CL:0000234,7.05e-28,48;CL:0000860,4.01e-27,42;CL:0002057,4.01e-27,42;CL:0000766,9.51e-27,72;CL:0000557,1.98e-23,67;CL:0002009,3.25e-22,61;CL:0000839,4.87e-22,66;CL:0002194,4.02e-21,59;CL:0000576,4.02e-21,59;CL:0000040,4.02e-21,59;CL:0000559,4.02e-21,59;CL:0000738,9.13e-21,136;CL:0000763,2.55e-19,108;CL:0000049,2.55e-19,108;CL:0000037,1.27e-18,168;CL:0002031,3.23e-18,120;CL:0000988,1.73e-17,177;CL:0002032,2.83e-17,161;CL:0000837,2.83e-17,161;CL:0002087,4.35e-17,115;CL:0000134,1.40e-07,354;CL:0002393,7.96e-07,9;CL:0002397,7.96e-07,9;CL:0000094,9.78e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.54e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.27e-22!102;UBERON:0003061!2.27e-22!102;UBERON:0002371!5.57e-20!80;UBERON:0001474!1.03e-18!86;UBERON:0002193!2.13e-18!112;UBERON:0004765!4.48e-13!101;UBERON:0001434!4.48e-13!101;UBERON:0002405!3.54e-09!115;UBERON:0003081!1.36e-07!216;UBERON:0002204!6.14e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.45e-24,98;UBERON:0003061,1.45e-24,98;UBERON:0002371,1.38e-22,76;UBERON:0001474,4.48e-21,82;UBERON:0002193,3.52e-20,108;UBERON:0004765,1.02e-17,90;UBERON:0002405,2.10e-15,93;UBERON:0001434,2.21e-13,100;UBERON:0003081,3.36e-09,203;UBERON:0002204,4.79e-07,167 | |||
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| ||
|short_description=p2@RRP12 | |||
}} | }} |
Latest revision as of 06:23, 20 September 2015
Short description: | p2@RRP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RRP12_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 11bp_to_ENST00000315563_5end |
EntrezGene: | RRP12 |
HGNC: | 29100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.05e-28 | 48 |
phagocyte | 7.05e-28 | 48 |
classical monocyte | 4.01e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.01e-27 | 42 |
myeloid leukocyte | 9.51e-27 | 72 |
granulocyte monocyte progenitor cell | 1.98e-23 | 67 |
macrophage dendritic cell progenitor | 3.25e-22 | 61 |
myeloid lineage restricted progenitor cell | 4.87e-22 | 66 |
monopoietic cell | 4.02e-21 | 59 |
monocyte | 4.02e-21 | 59 |
monoblast | 4.02e-21 | 59 |
promonocyte | 4.02e-21 | 59 |
leukocyte | 9.13e-21 | 136 |
myeloid cell | 2.55e-19 | 108 |
common myeloid progenitor | 2.55e-19 | 108 |
hematopoietic stem cell | 1.27e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 3.23e-18 | 120 |
hematopoietic cell | 1.73e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.83e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.83e-17 | 161 |
nongranular leukocyte | 4.35e-17 | 115 |
mesenchymal cell | 1.40e-07 | 354 |
intermediate monocyte | 7.96e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.96e-07 | 9 |
granulocyte | 9.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.45e-24 | 98 |
blood island | 1.45e-24 | 98 |
bone marrow | 1.38e-22 | 76 |
bone element | 4.48e-21 | 82 |
hemolymphoid system | 3.52e-20 | 108 |
skeletal element | 1.02e-17 | 90 |
immune system | 2.10e-15 | 93 |
skeletal system | 2.21e-13 | 100 |
lateral plate mesoderm | 3.36e-09 | 203 |
musculoskeletal system | 4.79e-07 | 167 |