FFCP PHASE1:Hg19::chr4:109087722..109087729,-: Difference between revisions
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|id=chr4:109087722..109087729,-
|short_description=p39@LEF1
|description=CAGE_peak_39_at_LEF1_5end
|association_with_transcript=147bp_to_ENST00000510624,uc011cfk.1_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDK3 | |UniProt=E9PDK3 | ||
|association_with_transcript=147bp_to_ENST00000510624,uc011cfk.1_5end | |||
|cluster_id=chr4:109087722..109087729,- | |||
|description=CAGE_peak_39_at_LEF1_5end | |||
|id=chr4:109087722..109087729,- | |||
|ontology_enrichment_celltype=CL:0000084!1.24e-11!25;CL:0000827!1.24e-11!25;CL:0000815!1.89e-09!2;CL:0000792!1.89e-09!2;CL:0002677!1.89e-09!2;CL:0000542!1.86e-08!53;CL:0000051!1.86e-08!53;CL:0000791!1.85e-07!18;CL:0000789!1.85e-07!18;CL:0002420!1.85e-07!18;CL:0002419!1.85e-07!18;CL:0000790!1.85e-07!18;CL:0000838!3.13e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002253;2.60e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.73e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.46e-08!8;DOID:1240!7.85e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5409;4.92e-21;4!DOID:1325;1.83e-12;7!DOID:3904;1.83e-12;7!DOID:3905;6.63e-10;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,6.33e-21,4;DOID:1325,2.12e-12,7;DOID:3904,2.12e-12,7;DOID:3905,7.41e-10,9 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.99e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.34e-40;2!UBERON:0005058;1.34e-40;2!UBERON:0009113;1.34e-40;2!UBERON:0004177;6.40e-17;5!UBERON:0005057;6.40e-17;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.17e-21,4;UBERON:0005058,5.17e-21,4;UBERON:0009113,5.17e-21,4;UBERON:0003295,5.17e-21,4;UBERON:0005562,5.17e-21,4;UBERON:0003351,2.33e-14,6;UBERON:0004177,1.89e-12,7;UBERON:0005057,1.89e-12,7;UBERON:0004807,8.10e-12,28;UBERON:0000974,5.36e-09,10;UBERON:0003408,5.36e-09,10;UBERON:0001042,5.36e-09,10;UBERON:0009145,5.36e-09,10;UBERON:0006562,2.92e-08,11;UBERON:0009722,2.92e-08,11;UBERON:0007690,2.92e-08,11;UBERON:0000072,3.63e-07,47 | |||
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| ||
|short_description=p39@LEF1 | |||
}} | }} |
Latest revision as of 14:45, 24 September 2015
Short description: | p39@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_LEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_ENST00000510624, uc011cfk.1_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | E9PDK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.17e-21 | 4 |
hemolymphoid system gland | 5.17e-21 | 4 |
thymic region | 5.17e-21 | 4 |
pharyngeal gland | 5.17e-21 | 4 |
thymus primordium | 5.17e-21 | 4 |
pharyngeal epithelium | 2.33e-14 | 6 |
hemopoietic organ | 1.89e-12 | 7 |
immune organ | 1.89e-12 | 7 |
respiratory system epithelium | 8.10e-12 | 28 |
neck | 5.36e-09 | 10 |
gland of gut | 5.36e-09 | 10 |
chordate pharynx | 5.36e-09 | 10 |
pharyngeal region of foregut | 5.36e-09 | 10 |
pharynx | 2.92e-08 | 11 |
entire pharyngeal arch endoderm | 2.92e-08 | 11 |
early pharyngeal endoderm | 2.92e-08 | 11 |
segment of respiratory tract | 3.63e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 6.33e-21 | 4 |
bronchus cancer | 2.12e-12 | 7 |
bronchogenic carcinoma | 2.12e-12 | 7 |
lung carcinoma | 7.41e-10 | 9 |