FFCP PHASE1:Hg19::chr4:109087872..109087881,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |||
|TSSclassifier=strong | |||
|UniProt=E9PDK3 | |||
|association_with_transcript=0bp_to_ENST00000510624,uc011cfk.1_5end | |||
|cluster_id=chr4:109087872..109087881,- | |||
|coexpression_cluster_id=C921 | |||
|description=CAGE_peak_28_at_LEF1_5end | |||
|id=chr4:109087872..109087881,- | |||
|ontology_enrichment_celltype=CL:0000084!2.72e-37!25;CL:0000827!2.72e-37!25;CL:0000791!1.58e-36!18;CL:0000789!1.58e-36!18;CL:0002420!1.58e-36!18;CL:0002419!1.58e-36!18;CL:0000790!1.58e-36!18;CL:0000625!4.79e-22!11;CL:0000838!2.54e-21!52;CL:0000542!8.20e-21!53;CL:0000051!8.20e-21!53;CL:0000624!6.90e-19!6;CL:0000898!1.48e-10!3;CL:0002087!9.63e-10!119;CL:0000842!1.54e-09!3;CL:0000037!2.20e-08!172;CL:0000566!2.20e-08!172;CL:0000738!2.92e-08!140;CL:0000988!1.50e-07!182;CL:0000815!1.82e-07!2;CL:0000792!1.82e-07!2;CL:0002677!1.82e-07!2;CL:0000224!2.97e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000895;1.18e-13;1!CL:0000084;1.68e-12;25!CL:0000791;8.84e-07;18!CL:0000789;8.84e-07;18!CL:0002419;8.84e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,8.58e-14,1;CL:0000895,8.58e-14,1;CL:0002436,8.58e-14,1;CL:0002427,8.58e-14,1;CL:0002428,8.58e-14,1;CL:0002429,8.58e-14,1;CL:0002433,8.58e-14,1;CL:0002431,8.58e-14,1;CL:0002432,8.58e-14,1;CL:0000084,1.70e-12,25;CL:0000827,1.70e-12,25;CL:0000893,1.54e-07,2;CL:0002489,1.54e-07,2;CL:0000809,1.54e-07,2;CL:0000808,1.54e-07,2;CL:0000894,1.54e-07,2;CL:0000806,1.54e-07,2;CL:0000807,1.54e-07,2;CL:0000805,1.54e-07,2;CL:0002425,1.54e-07,2;CL:0000791,9.02e-07,18;CL:0000789,9.02e-07,18;CL:0002420,9.02e-07,18;CL:0002419,9.02e-07,18;CL:0000790,9.02e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002427;1.18e-13;1!CL:0002425;1.81e-07;2!UBERON:0006965;1.81e-07;2!CL:0000790;8.84e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.66e-12!15;UBERON:0000179!8.66e-12!15;UBERON:0000463!8.66e-12!15;UBERON:0004177!3.01e-11!7;UBERON:0002370!1.94e-08!4;UBERON:0005058!1.94e-08!4;UBERON:0009113!1.94e-08!4;UBERON:0003295!1.94e-08!4;UBERON:0005562!1.94e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.38e-26;2!UBERON:0005058;1.38e-26;2!UBERON:0009113;1.38e-26;2!UBERON:0004177;3.12e-11;5!UBERON:0005057;3.12e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.98e-29,4;UBERON:0005058,3.98e-29,4;UBERON:0009113,3.98e-29,4;UBERON:0003295,3.98e-29,4;UBERON:0005562,3.98e-29,4;UBERON:0003351,1.17e-19,6;UBERON:0004177,6.07e-17,7;UBERON:0005057,6.07e-17,7;UBERON:0000974,4.82e-12,10;UBERON:0003408,4.82e-12,10;UBERON:0001042,4.82e-12,10;UBERON:0009145,4.82e-12,10;UBERON:0006562,5.33e-11,11;UBERON:0009722,5.33e-11,11;UBERON:0007690,5.33e-11,11;UBERON:0008814,6.41e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0.393010762749165,0.616804496998528,0.501559486172034,0.651844533267181,1.4203434172042,0,0,0.883817722424512,1.55073726208535,0.541607727530031,0,0,0.493313713811028,0.276350017785848,1.44901542867526,1.4828656316206,1.07016331235885,2.09071047609954,0.339928028092699,1.53288197440768,0.68725489096526,1.26509846009751,0.637130828648193,0,0.950452044448374,0.752875595388864,0.895906278080929,0,0.473554504088034,2.46338399076314,0.604820229674197,0.267440195783507,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0.144269212976445,2.98795742063339,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,4.08773192782946,0.156980256395025,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89268188003008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,5.61923515573253,4.09693114352662,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | |||
|short_description=p28@LEF1 | |||
}} |
Latest revision as of 14:50, 24 September 2015
Short description: | p28@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_LEF1_5end |
Coexpression cluster: | C921_chronic_thymus_CD4_acute_CD8_Hodgkin_Peripheral |
Association with transcript: | 0bp_to_ENST00000510624, uc011cfk.1_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | E9PDK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 8.58e-14 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 8.58e-14 | 1 |
mature CD4 single-positive thymocyte | 8.58e-14 | 1 |
resting double-positive thymocyte | 8.58e-14 | 1 |
double-positive blast | 8.58e-14 | 1 |
CD69-positive double-positive thymocyte | 8.58e-14 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 8.58e-14 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 8.58e-14 | 1 |
CD24-positive, CD4 single-positive thymocyte | 8.58e-14 | 1 |
T cell | 1.70e-12 | 25 |
pro-T cell | 1.70e-12 | 25 |
thymocyte | 1.54e-07 | 2 |
double negative thymocyte | 1.54e-07 | 2 |
double-positive, alpha-beta thymocyte | 1.54e-07 | 2 |
DN4 thymocyte | 1.54e-07 | 2 |
DN1 thymic pro-T cell | 1.54e-07 | 2 |
DN2 thymocyte | 1.54e-07 | 2 |
DN3 thymocyte | 1.54e-07 | 2 |
immature single positive thymocyte | 1.54e-07 | 2 |
early T lineage precursor | 1.54e-07 | 2 |
mature alpha-beta T cell | 9.02e-07 | 18 |
alpha-beta T cell | 9.02e-07 | 18 |
immature T cell | 9.02e-07 | 18 |
mature T cell | 9.02e-07 | 18 |
immature alpha-beta T cell | 9.02e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.98e-29 | 4 |
hemolymphoid system gland | 3.98e-29 | 4 |
thymic region | 3.98e-29 | 4 |
pharyngeal gland | 3.98e-29 | 4 |
thymus primordium | 3.98e-29 | 4 |
pharyngeal epithelium | 1.17e-19 | 6 |
hemopoietic organ | 6.07e-17 | 7 |
immune organ | 6.07e-17 | 7 |
neck | 4.82e-12 | 10 |
gland of gut | 4.82e-12 | 10 |
chordate pharynx | 4.82e-12 | 10 |
pharyngeal region of foregut | 4.82e-12 | 10 |
pharynx | 5.33e-11 | 11 |
entire pharyngeal arch endoderm | 5.33e-11 | 11 |
early pharyngeal endoderm | 5.33e-11 | 11 |
pharyngeal arch system | 6.41e-07 | 18 |