FFCP PHASE1:Hg19::chr4:109088130..109088163,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAB1,B7Z8E2,E9PDK3,Q659G9,Q9UJU2 | |UniProt=D6RAB1,B7Z8E2,E9PDK3,Q659G9,Q9UJU2 | ||
|association_with_transcript=-177bp_to_ENST00000515500,NM_001166119_5end | |association_with_transcript=-177bp_to_ENST00000515500,NM_001166119_5end | ||
|cluster_id=chr4:109088130..109088163,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_13_at_LEF1_5end | |description=CAGE_peak_13_at_LEF1_5end | ||
|id=chr4:109088130..109088163,- | |id=chr4:109088130..109088163,- | ||
|ontology_enrichment_celltype=CL:0000791!3.39e-21!18;CL:0000789!3.39e-21!18;CL:0002420!3.39e-21!18;CL:0002419!3.39e-21!18;CL:0000790!3.39e-21!18;CL:0000084!1.68e-19!25;CL:0000827!1.68e-19!25;CL:0000625!5.64e-15!11;CL:0000542!4.05e-14!53;CL:0000051!4.05e-14!53;CL:0000838!2.43e-13!52;CL:0000624!1.73e-09!6;CL:0002087!2.68e-07!119 | |ontology_enrichment_celltype=CL:0000791!3.39e-21!18;CL:0000789!3.39e-21!18;CL:0002420!3.39e-21!18;CL:0002419!3.39e-21!18;CL:0000790!3.39e-21!18;CL:0000084!1.68e-19!25;CL:0000827!1.68e-19!25;CL:0000625!5.64e-15!11;CL:0000542!4.05e-14!53;CL:0000051!4.05e-14!53;CL:0000838!2.43e-13!52;CL:0000624!1.73e-09!6;CL:0002087!2.68e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.48e-50;18!CL:0000789;8.48e-50;18!CL:0002419;8.48e-50;18!CL:0000084;3.88e-48;25!CL:0000625;6.18e-34;11!CL:0000624;1.28e-20;6!CL:0000542;1.85e-16;53!CL:0000898;4.82e-11;3!CL:0000226;2.95e-10;3!CL:0000842;2.95e-10;3!CL:0000623;1.20e-09;3!CL:0000815;3.51e-08;2!CL:0000792;3.51e-08;2!CL:0002677;3.51e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.30e-50,18;CL:0000789,7.30e-50,18;CL:0002420,7.30e-50,18;CL:0002419,7.30e-50,18;CL:0000790,7.30e-50,18;CL:0000084,3.56e-48,25;CL:0000827,3.56e-48,25;CL:0000625,5.90e-34,11;CL:0000542,1.24e-31,53;CL:0000051,1.24e-31,53;CL:0000838,9.40e-30,52;CL:0000624,1.14e-20,6;CL:0002087,5.43e-17,115;CL:0000738,1.06e-16,136;CL:0000037,5.09e-14,168;CL:0000988,7.09e-13,177;CL:0002031,3.29e-11,120;CL:0000898,4.30e-11,3;CL:0002032,7.29e-11,161;CL:0000837,7.29e-11,161;CL:0000226,3.51e-10,3;CL:0000842,3.51e-10,3;CL:0000623,1.08e-09,3;CL:0000825,1.08e-09,3;CL:0000815,3.51e-08,2;CL:0000792,3.51e-08,2;CL:0002677,3.51e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;8.48e-50;18!CL:0000051;1.85e-16;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.77e-15!115;UBERON:0000178!4.29e-09!15;UBERON:0000179!4.29e-09!15;UBERON:0000463!4.29e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.63e-15;15!UBERON:0000179;5.63e-15;15!UBERON:0000463;5.63e-15;15!UBERON:0002390;8.54e-09;32!UBERON:0002193;7.63e-08;42!UBERON:0002370;1.13e-07;2!UBERON:0005058;1.13e-07;2!UBERON:0009113;1.13e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.27e-15,15;UBERON:0000179,6.27e-15,15;UBERON:0000463,6.27e-15,15;UBERON:0002370,4.87e-08,4;UBERON:0005058,4.87e-08,4;UBERON:0009113,4.87e-08,4;UBERON:0003295,4.87e-08,4;UBERON:0005562,4.87e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,1.57345710739562,2.68680578668049,0,0,0,0,0,0,0,1.66198622559563,0.802177789880567,1.95309783644267,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.526768169550154,9.24535919535015,9.43225830597995,12.5416914389701,8.86088425570594,15.6442687984123,13.7299863663073,23.3792074089494,0.891283655081389,11.1950244840438,8.86135578334484,10.2905468230706,0.25618263945135,1.04047478047903,6.24864037493969,3.03985019564433,5.79606171470105,8.89719378972362,8.56130649887082,4.18142095219907,3.28597093822942,4.98186641682498,5.49803912772208,6.57851199250707,7.32700452945422,5.85975108470777,4.75226022224187,6.92645547757755,8.44711633619161,2.49861453104692,5.20909954496837,3.28451198768419,6.8546292696409,4.27904313253612,6.37227377084316,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.514137463516618,0,0.571652865261156,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,2.58753089831421,3.08023287071396,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,3.01999881146064,4.26910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,2.29391162142713,2.84823593587081,0.952927101831156,1.64544909234478,3.24236655596359,4.32025149790492,0.79312517629427,0,0,0,1.85803175125719,1.298422916788,5.5490637811763,3.18852545457645,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,3.06579894587209,0.156980256395025,3.65665700180344,0.225595660617181,0,0.503464760927528,0,3.01979500062719,0,0,0.141353071433941,0.865554558968364,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0.397429223405979,0.126621591911757,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.427149650270779,0.157204305099666,0.414239055347196,4.96166021811951,0.988058159489721,0.60896299190448,0,0,0,0,0,0.314108192500469,0,0,0.3755727921195,0,0.110929051536852,0.124192805882767,0,0,0.454947352624943,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,2.44471409503885,0,0,0.3062454773532,0.0642292250964595,0,0,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0.596748666348824,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.397901550322736,0,0.22589216407792,0,0.452888530700021,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.563903507879121,0.773494655682926,0.499705779624645,0,0,0,0,0.458729283404541,0.286679166302903,0.157771562193185,0.203974470572744,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0.20686599172379,0,0.714193294391221,8.59032500818881,4.46937942930177,0.448527450322454,0.0636471582781649,0,0,0,1.34704106029175,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,2.21401172950129,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,1.57345710739562,2.68680578668049,0,0,0,0,0,0,0,1.66198622559563,0.802177789880567,1.95309783644267,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.526768169550154,9.24535919535015,9.43225830597995,12.5416914389701,8.86088425570594,15.6442687984123,13.7299863663073,23.3792074089494,0.891283655081389,11.1950244840438,8.86135578334484,10.2905468230706,0.25618263945135,1.04047478047903,6.24864037493969,3.03985019564433,5.79606171470105,8.89719378972362,8.56130649887082,4.18142095219907,3.28597093822942,4.98186641682498,5.49803912772208,6.57851199250707,7.32700452945422,5.85975108470777,4.75226022224187,6.92645547757755,8.44711633619161,2.49861453104692,5.20909954496837,3.28451198768419,6.8546292696409,4.27904313253612,6.37227377084316,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.514137463516618,0,0.571652865261156,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,2.58753089831421,3.08023287071396,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,3.01999881146064,4.26910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,2.29391162142713,2.84823593587081,0.952927101831156,1.64544909234478,3.24236655596359,4.32025149790492,0.79312517629427,0,0,0,1.85803175125719,1.298422916788,5.5490637811763,3.18852545457645,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,3.06579894587209,0.156980256395025,3.65665700180344,0.225595660617181,0,0.503464760927528,0,3.01979500062719,0,0,0.141353071433941,0.865554558968364,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0.397429223405979,0.126621591911757,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.427149650270779,0.157204305099666,0.414239055347196,4.96166021811951,0.988058159489721,0.60896299190448,0,0,0,0,0,0.314108192500469,0,0,0.3755727921195,0,0.110929051536852,0.124192805882767,0,0,0.454947352624943,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,2.44471409503885,0,0,0.3062454773532,0.0642292250964595,0,0,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0.596748666348824,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.397901550322736,0,0.22589216407792,0,0.452888530700021,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.563903507879121,0.773494655682926,0.499705779624645,0,0,0,0,0.458729283404541,0.286679166302903,0.157771562193185,0.203974470572744,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0.20686599172379,0,0.714193294391221,8.59032500818881,4.46937942930177,0.448527450322454,0.0636471582781649,0,0,0,1.34704106029175,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,2.21401172950129,0 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|short_description=p13@LEF1 | |short_description=p13@LEF1 | ||
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Latest revision as of 14:55, 24 September 2015
Short description: | p13@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LEF1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -177bp_to_ENST00000515500, NM_001166119_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | D6RAB1B7Z8E2E9PDK3Q659G9Q9UJU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.30e-50 | 18 |
alpha-beta T cell | 7.30e-50 | 18 |
immature T cell | 7.30e-50 | 18 |
mature T cell | 7.30e-50 | 18 |
immature alpha-beta T cell | 7.30e-50 | 18 |
T cell | 3.56e-48 | 25 |
pro-T cell | 3.56e-48 | 25 |
CD8-positive, alpha-beta T cell | 5.90e-34 | 11 |
lymphocyte | 1.24e-31 | 53 |
common lymphoid progenitor | 1.24e-31 | 53 |
lymphoid lineage restricted progenitor cell | 9.40e-30 | 52 |
CD4-positive, alpha-beta T cell | 1.14e-20 | 6 |
nongranular leukocyte | 5.43e-17 | 115 |
leukocyte | 1.06e-16 | 136 |
hematopoietic stem cell | 5.09e-14 | 168 |
hematopoietic cell | 7.09e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 3.29e-11 | 120 |
naive T cell | 4.30e-11 | 3 |
hematopoietic oligopotent progenitor cell | 7.29e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.29e-11 | 161 |
single nucleate cell | 3.51e-10 | 3 |
mononuclear cell | 3.51e-10 | 3 |
natural killer cell | 1.08e-09 | 3 |
pro-NK cell | 1.08e-09 | 3 |
regulatory T cell | 3.51e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.51e-08 | 2 |
naive regulatory T cell | 3.51e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 6.27e-15 | 15 |
haemolymphatic fluid | 6.27e-15 | 15 |
organism substance | 6.27e-15 | 15 |
thymus | 4.87e-08 | 4 |
hemolymphoid system gland | 4.87e-08 | 4 |
thymic region | 4.87e-08 | 4 |
pharyngeal gland | 4.87e-08 | 4 |
thymus primordium | 4.87e-08 | 4 |