FFCP PHASE1:Hg19::chr4:109089290..109089320,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:109089290..109089320,- to FFCP PHASE1:Hg19::chr4:109089290..109089320,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJU2 | |UniProt=Q9UJU2 | ||
|association_with_transcript=257bp_to_ENST00000265165,uc003hyt.1,uc003hyu.1,uc003hyv.1,uc010imb.1_5end | |||
|cluster_id=chr4:109089290..109089320,- | |||
|description=CAGE_peak_14_at_LEF1_5end | |||
|id=chr4:109089290..109089320,- | |||
|ontology_enrichment_celltype=CL:0000791!1.01e-14!18;CL:0000789!1.01e-14!18;CL:0002420!1.01e-14!18;CL:0002419!1.01e-14!18;CL:0000790!1.01e-14!18;CL:0000084!5.29e-13!25;CL:0000827!5.29e-13!25;CL:0000542!7.60e-12!53;CL:0000051!7.60e-12!53;CL:0000838!3.17e-11!52;CL:0000625!1.09e-10!11;CL:0000624!5.62e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.59e-35;18!CL:0000789;2.59e-35;18!CL:0002419;2.59e-35;18!CL:0000084;4.95e-34;25!CL:0000625;3.25e-24;11!CL:0000624;4.39e-15;6!CL:0000542;1.01e-13;53!CL:0000898;5.97e-08;3!CL:0000623;1.06e-07;3!CL:0002567;4.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.41e-36,18;CL:0000789,4.41e-36,18;CL:0002420,4.41e-36,18;CL:0002419,4.41e-36,18;CL:0000790,4.41e-36,18;CL:0000084,9.85e-35,25;CL:0000827,9.85e-35,25;CL:0000542,4.33e-26,53;CL:0000051,4.33e-26,53;CL:0000625,8.98e-25,11;CL:0000838,1.53e-24,52;CL:0000624,2.43e-15,6;CL:0000037,1.65e-12,168;CL:0000988,2.39e-11,177;CL:0002087,2.67e-11,115;CL:0002032,5.97e-11,161;CL:0000837,5.97e-11,161;CL:0000738,6.81e-10,136;CL:0000898,3.35e-08,3;CL:0002031,5.43e-08,120;CL:0000623,1.38e-07,3;CL:0000825,1.38e-07,3;CL:0002567,6.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.59e-35;18!CL:0000051;1.01e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;2.41e-07;8!DOID:2531;3.94e-07;51!DOID:0060083;3.94e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.33e-10,51;DOID:0060083,3.33e-10,51;DOID:1240,2.05e-07,39;DOID:1036,2.94e-07,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.502170558379211,0,0.246301768349837,0.157421562627358,0,0.767658796194425,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,1.29557466407592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0.800791974072025,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0.526768169550154,5.50787356318733,3.53709686474248,5.96244347098577,2.67498392625085,1.95553359980154,2.8406868344084,1.94826728407911,0.779873198196215,4.12448270464772,3.1014745241707,2.97884250141517,0.384273959177026,0.520237390239513,4.27538551969558,4.14525026678773,2.60822777161547,2.96573126324121,3.74557159325598,4.18142095219907,3.96582699441482,2.68254345521345,3.09264700934367,3.03623630423403,2.54852331459277,3.25541726928209,1.90090408889675,2.71035214339991,1.91979916731628,4.99722906209383,2.13099526839615,1.64225599384209,1.81446068902259,2.13952156626806,3.62061009706997,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0.283604451492204,0,0,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.485618833104395,0.561803226808994,0,0.245668634623536,0,0,0,0,0,0.505008341862199,0.250237039743928,0.277064115484183,1.31693286264251,0,0.45071417671979,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0.185176890317059,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.761974731506028,1.14596527667483,1.17217447210047,1.71072446022705,1.54241239054985,0.600686115687835,0.857479297891735,0.224262168690721,0.87192013766656,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,2.36436912242313,2.15627574859517,1.41177339907723,0.254094624222463,0,0,0.335032530668698,0,1.49801404789436,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.44737618286021,0.862856803274467,2.34800627167578,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.55668090191184,0.742585499285292,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0,1.52234282769651,0,0,0.476463550915578,0.822724546172388,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,2.41544127663434,2.59684583357601,2.41882267384608,1.75368900001705,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,0,0.614481528616916,0.223676107892416,0.500547425135725,0,0,1.23087398947712,0.811367035427949,2.33150377598474,7.04935025439248,0,0,0,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0,0,0,0.828851746593443,0.251932747854276,0.511343412510774,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.278304294485554,0,0,0,1.44999915086959,0.568967241427498,0,0,0.689486746482929,0,0.173624994933292,0,0.482385754501632,0,0.221158519862449,0,0.219385397153973,0,0.278847488557207,0.307801034015188,0,0,0,0,0,0,0,4.08773192782946,2.5116841023204,4.65392709320438,0.676786981851542,0.588187602953219,1.1747511088309,0.189753732724185,3.81447789552909,0.843992258112108,0,0.282706142867882,3.02944095638928,0,0.0884575645033392,0,0.593042257361244,0.741383633679017,0.522109747527277,0.269604531922708,0,0.234264445725339,1.82454789215666,0.19566461893209,0,0,0,0,0.379119477770928,0,0.207376382794494,0,1.65495977937749,0.313932918407225,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,1.09633539717401,1.19228767021794,0.126621591911757,0,0,0.213452994739353,0.19980960958213,0,0.916292769327325,0,0,0,0,0.135904206073614,0.209205692624666,0.509991088181609,0,0,0.273810757783986,0,0,0,0,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.419636705079985,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,1.19730191562487,1.39557285273876,0.170388021785422,0.453248366080503,0,0,0.129282956361551,0.13223260174269,0,0.704815022316672,0.533937062838473,0.78602152549833,0,1.9846640872478,4.54506753365272,1.33971858218986,0,0,0,0,0,2.04170325125305,0,0,0,0.573409195690071,0.332787154610557,0.310482014706917,0,0,1.21319294033318,1.42732666772484,0,0.468334905806882,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.358177682162975,0,0,0.176689145945881,0,0,0,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| ||
|short_description=p14@LEF1 | |||
}} | }} |
Latest revision as of 15:07, 24 September 2015
Short description: | p14@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 257bp_to_ENST00000265165, uc003hyt.1, uc003hyu.1, uc003hyv.1, uc010imb.1_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.41e-36 | 18 |
alpha-beta T cell | 4.41e-36 | 18 |
immature T cell | 4.41e-36 | 18 |
mature T cell | 4.41e-36 | 18 |
immature alpha-beta T cell | 4.41e-36 | 18 |
T cell | 9.85e-35 | 25 |
pro-T cell | 9.85e-35 | 25 |
lymphocyte | 4.33e-26 | 53 |
common lymphoid progenitor | 4.33e-26 | 53 |
CD8-positive, alpha-beta T cell | 8.98e-25 | 11 |
lymphoid lineage restricted progenitor cell | 1.53e-24 | 52 |
CD4-positive, alpha-beta T cell | 2.43e-15 | 6 |
hematopoietic stem cell | 1.65e-12 | 168 |
hematopoietic cell | 2.39e-11 | 177 |
nongranular leukocyte | 2.67e-11 | 115 |
hematopoietic oligopotent progenitor cell | 5.97e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.97e-11 | 161 |
leukocyte | 6.81e-10 | 136 |
naive T cell | 3.35e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 5.43e-08 | 120 |
natural killer cell | 1.38e-07 | 3 |
pro-NK cell | 1.38e-07 | 3 |
light melanocyte | 6.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.33e-10 | 51 |
immune system cancer | 3.33e-10 | 51 |
leukemia | 2.05e-07 | 39 |
chronic leukemia | 2.94e-07 | 8 |