FFCP PHASE1:Hg19::chr6:128239732..128239745,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:128239732..128239745,-
|short_description=p2@THEMIS
|description=CAGE_peak_2_at_THEMIS_5end
|association_with_transcript=0bp_to_uc003qbi.2,uc010kfb.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=387357 | |EntrezGene=387357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21569 | |HGNC=21569 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003qbi.2,uc010kfb.2_5end | |||
|cluster_id=chr6:128239732..128239745,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_2_at_THEMIS_5end | |||
|id=chr6:128239732..128239745,- | |||
|ontology_enrichment_celltype=CL:0000791!1.04e-28!18;CL:0000789!1.04e-28!18;CL:0002420!1.04e-28!18;CL:0002419!1.04e-28!18;CL:0000790!1.04e-28!18;CL:0000084!1.63e-25!25;CL:0000827!1.63e-25!25;CL:0000625!3.05e-19!11;CL:0000738!5.16e-14!140;CL:0000838!2.10e-13!52;CL:0000542!5.30e-13!53;CL:0000051!5.30e-13!53;CL:0002087!5.93e-12!119;CL:0000624!3.89e-10!6;CL:0002031!6.80e-10!124;CL:0000037!6.66e-09!172;CL:0000566!6.66e-09!172;CL:0000988!9.83e-08!182;CL:0002032!2.53e-07!165;CL:0000837!2.53e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.12e-42;18!CL:0000789;6.12e-42;18!CL:0002419;6.12e-42;18!CL:0000625;5.50e-34;11!CL:0000084;1.20e-32;25!CL:0000624;9.58e-13;6!CL:0000542;8.03e-10;53!CL:0000226;9.79e-10;3!CL:0000842;9.79e-10;3!CL:0000623;2.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.32e-42,18;CL:0000789,7.32e-42,18;CL:0002420,7.32e-42,18;CL:0002419,7.32e-42,18;CL:0000790,7.32e-42,18;CL:0000625,5.52e-34,11;CL:0000084,1.39e-32,25;CL:0000827,1.39e-32,25;CL:0000838,9.06e-19,52;CL:0000542,2.60e-18,53;CL:0000051,2.60e-18,53;CL:0000738,9.22e-14,136;CL:0002087,6.40e-13,115;CL:0000624,1.12e-12,6;CL:0000226,9.80e-10,3;CL:0000842,9.80e-10,3;CL:0000037,1.20e-09,168;CL:0000623,2.56e-09,3;CL:0000825,2.56e-09,3;CL:0002031,5.16e-09,120;CL:0000988,9.04e-09,177;CL:0002032,3.53e-07,161;CL:0000837,3.53e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;6.12e-42;18!CL:0000051;8.03e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.21e-26!115;UBERON:0000178!1.21e-14!15;UBERON:0000179!1.21e-14!15;UBERON:0000463!1.21e-14!15;UBERON:0002390!3.55e-08!102;UBERON:0003061!3.55e-08!102;UBERON:0002193!4.61e-08!112;UBERON:0004177!1.44e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.45e-26;15!UBERON:0000179;1.45e-26;15!UBERON:0000463;1.45e-26;15!UBERON:0002390;1.28e-15;32!UBERON:0002193;5.74e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.34e-26,15;UBERON:0000179,1.34e-26,15;UBERON:0000463,1.34e-26,15;UBERON:0007023,4.55e-09,114;UBERON:0002193,3.87e-08,108;UBERON:0002390,1.59e-07,98;UBERON:0003061,1.59e-07,98;UBERON:0002370,6.20e-07,4;UBERON:0005058,6.20e-07,4;UBERON:0009113,6.20e-07,4;UBERON:0003295,6.20e-07,4;UBERON:0005562,6.20e-07,4;UBERON:0001042,8.79e-07,10;UBERON:0009145,8.79e-07,10 | |||
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| ||
|short_description=p2@THEMIS | |||
}} | }} |
Latest revision as of 15:22, 24 September 2015
Short description: | p2@THEMIS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THEMIS_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_uc003qbi.2, uc010kfb.2_5end |
EntrezGene: | THEMIS |
HGNC: | 21569 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.32e-42 | 18 |
alpha-beta T cell | 7.32e-42 | 18 |
immature T cell | 7.32e-42 | 18 |
mature T cell | 7.32e-42 | 18 |
immature alpha-beta T cell | 7.32e-42 | 18 |
CD8-positive, alpha-beta T cell | 5.52e-34 | 11 |
T cell | 1.39e-32 | 25 |
pro-T cell | 1.39e-32 | 25 |
lymphoid lineage restricted progenitor cell | 9.06e-19 | 52 |
lymphocyte | 2.60e-18 | 53 |
common lymphoid progenitor | 2.60e-18 | 53 |
leukocyte | 9.22e-14 | 136 |
nongranular leukocyte | 6.40e-13 | 115 |
CD4-positive, alpha-beta T cell | 1.12e-12 | 6 |
single nucleate cell | 9.80e-10 | 3 |
mononuclear cell | 9.80e-10 | 3 |
hematopoietic stem cell | 1.20e-09 | 168 |
natural killer cell | 2.56e-09 | 3 |
pro-NK cell | 2.56e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 5.16e-09 | 120 |
hematopoietic cell | 9.04e-09 | 177 |
hematopoietic oligopotent progenitor cell | 3.53e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.53e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.34e-26 | 15 |
haemolymphatic fluid | 1.34e-26 | 15 |
organism substance | 1.34e-26 | 15 |
adult organism | 4.55e-09 | 114 |
hemolymphoid system | 3.87e-08 | 108 |
hematopoietic system | 1.59e-07 | 98 |
blood island | 1.59e-07 | 98 |
thymus | 6.20e-07 | 4 |
hemolymphoid system gland | 6.20e-07 | 4 |
thymic region | 6.20e-07 | 4 |
pharyngeal gland | 6.20e-07 | 4 |
thymus primordium | 6.20e-07 | 4 |
chordate pharynx | 8.79e-07 | 10 |
pharyngeal region of foregut | 8.79e-07 | 10 |