FFCP PHASE1:Hg19::chr12:7167997..7168040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=716 | |EntrezGene=716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1247 | |HGNC=1247 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000489541,ENST00000541647,ENST00000543187_5end | |association_with_transcript=0bp_to_ENST00000489541,ENST00000541647,ENST00000543187_5end | ||
|cluster_id=chr12:7167997..7168040,+ | |||
|coexpression_cluster_id=C424 | |coexpression_cluster_id=C424 | ||
|description=CAGE_peak_1_at_C1S_5end | |description=CAGE_peak_1_at_C1S_5end | ||
|id=chr12:7167997..7168040,+ | |id=chr12:7167997..7168040,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.77e-20!180;CL:0000057!1.85e-14!75;CL:0000680!4.49e-10!57;CL:0000056!4.49e-10!57;CL:0000355!4.49e-10!57;CL:0000187!6.43e-10!54;CL:0000183!6.09e-09!59;CL:0000393!1.06e-08!60;CL:0000211!1.06e-08!60;CL:0000136!1.87e-08!15;CL:0000192!4.69e-08!42;CL:0000514!4.69e-08!42 | |ontology_enrichment_celltype=CL:0000055!5.77e-20!180;CL:0000057!1.85e-14!75;CL:0000680!4.49e-10!57;CL:0000056!4.49e-10!57;CL:0000355!4.49e-10!57;CL:0000187!6.43e-10!54;CL:0000183!6.09e-09!59;CL:0000393!1.06e-08!60;CL:0000211!1.06e-08!60;CL:0000136!1.87e-08!15;CL:0000192!4.69e-08!42;CL:0000514!4.69e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000136;9.94e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.80e-15,76;CL:0000680,1.09e-10,58;CL:0000056,1.09e-10,58;CL:0000355,1.09e-10,58;CL:0000187,1.57e-10,55;CL:0000393,4.90e-09,61;CL:0000211,4.90e-09,61;CL:0000136,1.16e-08,15;CL:0000192,1.31e-08,43;CL:0000514,1.31e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.69e-18!365;UBERON:0000481!4.91e-18!347;UBERON:0000468!1.09e-12!659;UBERON:0005256!5.97e-12!143;UBERON:0007023!9.99e-12!115;UBERON:0002385!1.11e-11!63;UBERON:0001015!1.11e-11!63;UBERON:0000383!1.11e-11!63;UBERON:0003104!1.88e-11!238;UBERON:0009142!1.88e-11!238;UBERON:0000914!2.22e-11!83;UBERON:0002329!2.22e-11!83;UBERON:0003077!2.22e-11!83;UBERON:0003059!2.22e-11!83;UBERON:0007282!2.22e-11!83;UBERON:0009618!2.22e-11!83;UBERON:0007285!2.22e-11!83;UBERON:0000477!2.43e-11!286;UBERON:0002100!2.79e-11!216;UBERON:0001134!5.62e-11!61;UBERON:0002036!5.62e-11!61;UBERON:0003082!5.62e-11!61;UBERON:0004290!3.24e-10!70;UBERON:0000467!5.93e-10!625;UBERON:0000480!1.01e-09!626;UBERON:0000062!6.34e-09!511;UBERON:0000486!1.08e-08!82;UBERON:0007100!2.18e-08!27;UBERON:0004111!2.18e-08!241;UBERON:0003102!3.57e-08!95;UBERON:0000119!7.77e-08!312;UBERON:0000483!8.51e-08!309;UBERON:0000948!1.14e-07!24;UBERON:0005498!1.14e-07!24;UBERON:0004140!1.14e-07!24;UBERON:0009881!1.14e-07!24;UBERON:0004141!1.14e-07!24;UBERON:0003084!1.14e-07!24;UBERON:0007005!1.14e-07!24;UBERON:0004139!1.14e-07!24;UBERON:0004291!1.14e-07!24;UBERON:0001007!1.50e-07!155;UBERON:0001555!1.50e-07!155;UBERON:0007026!1.50e-07!155;UBERON:0001048!2.78e-07!168;UBERON:0000490!4.59e-07!138 | |ontology_enrichment_uberon=UBERON:0000475!1.69e-18!365;UBERON:0000481!4.91e-18!347;UBERON:0000468!1.09e-12!659;UBERON:0005256!5.97e-12!143;UBERON:0007023!9.99e-12!115;UBERON:0002385!1.11e-11!63;UBERON:0001015!1.11e-11!63;UBERON:0000383!1.11e-11!63;UBERON:0003104!1.88e-11!238;UBERON:0009142!1.88e-11!238;UBERON:0000914!2.22e-11!83;UBERON:0002329!2.22e-11!83;UBERON:0003077!2.22e-11!83;UBERON:0003059!2.22e-11!83;UBERON:0007282!2.22e-11!83;UBERON:0009618!2.22e-11!83;UBERON:0007285!2.22e-11!83;UBERON:0000477!2.43e-11!286;UBERON:0002100!2.79e-11!216;UBERON:0001134!5.62e-11!61;UBERON:0002036!5.62e-11!61;UBERON:0003082!5.62e-11!61;UBERON:0004290!3.24e-10!70;UBERON:0000467!5.93e-10!625;UBERON:0000480!1.01e-09!626;UBERON:0000062!6.34e-09!511;UBERON:0000486!1.08e-08!82;UBERON:0007100!2.18e-08!27;UBERON:0004111!2.18e-08!241;UBERON:0003102!3.57e-08!95;UBERON:0000119!7.77e-08!312;UBERON:0000483!8.51e-08!309;UBERON:0000948!1.14e-07!24;UBERON:0005498!1.14e-07!24;UBERON:0004140!1.14e-07!24;UBERON:0009881!1.14e-07!24;UBERON:0004141!1.14e-07!24;UBERON:0003084!1.14e-07!24;UBERON:0007005!1.14e-07!24;UBERON:0004139!1.14e-07!24;UBERON:0004291!1.14e-07!24;UBERON:0001007!1.50e-07!155;UBERON:0001555!1.50e-07!155;UBERON:0007026!1.50e-07!155;UBERON:0001048!2.78e-07!168;UBERON:0000490!4.59e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.75e-08;25!UBERON:0000948;2.04e-07;22 | |||
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| ||
|short_description=p1@C1S | |short_description=p1@C1S | ||
}} | }} |
Latest revision as of 16:45, 24 September 2015
Short description: | p1@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1S_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 0bp_to_ENST00000489541, ENST00000541647, ENST00000543187_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.80e-15 | 76 |
muscle precursor cell | 1.09e-10 | 58 |
myoblast | 1.09e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-10 | 58 |
muscle cell | 1.57e-10 | 55 |
electrically responsive cell | 4.90e-09 | 61 |
electrically active cell | 4.90e-09 | 61 |
fat cell | 1.16e-08 | 15 |
smooth muscle cell | 1.31e-08 | 43 |
smooth muscle myoblast | 1.31e-08 | 43 |