FFCP PHASE1:Hg19::chr4:111558118..111558133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5308 | |EntrezGene=5308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9005 | |HGNC=9005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000557119_5end | |association_with_transcript=33bp_to_ENST00000557119_5end | ||
|cluster_id=chr4:111558118..111558133,- | |||
|description=CAGE_peak_5_at_PITX2_5end | |description=CAGE_peak_5_at_PITX2_5end | ||
|id=chr4:111558118..111558133,- | |id=chr4:111558118..111558133,- | ||
|ontology_enrichment_celltype=CL:0002620!3.39e-16!23;CL:0000057!2.03e-12!75;CL:0002334!1.01e-11!12;CL:0000055!1.36e-11!180;CL:0000136!5.32e-07!15;CL:0002594!5.54e-07!4 | |ontology_enrichment_celltype=CL:0002620!3.39e-16!23;CL:0000057!2.03e-12!75;CL:0002334!1.01e-11!12;CL:0000055!1.36e-11!180;CL:0000136!5.32e-07!15;CL:0002594!5.54e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002580;5.36e-14;3!CL:0002569;7.99e-13;6!CL:0002588;5.36e-10;2!CL:0002363;1.05e-09;2!CL:0002334;3.80e-09;12!CL:0002615;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,5.62e-14,3;CL:0002569,8.38e-13,6;CL:0002588,3.66e-10,2;CL:0002363,1.46e-09,2;CL:0000008,1.46e-09,2;CL:0002334,3.84e-09,12;CL:0002615,9.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000008;1.05e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.47e-11!95;UBERON:0002199!3.46e-11!45;UBERON:0002416!3.46e-11!45;UBERON:0002097!1.95e-09!40;UBERON:0003688!2.42e-09!6;UBERON:0002358!2.42e-09!6;UBERON:0003684!2.42e-09!6;UBERON:0001178!2.42e-09!6;UBERON:0000475!2.90e-08!365;UBERON:0003350!1.58e-07!5;UBERON:0001310!5.54e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;7.99e-13;6!UBERON:0002331;1.19e-11;10!UBERON:0000020;3.30e-11;23!UBERON:0003104;5.35e-11;7!UBERON:0009142;5.35e-11;7!UBERON:0001032;1.10e-10;24!UBERON:0004456;1.10e-10;24!UBERON:0003566;1.05e-09;2!UBERON:0001777;1.05e-09;2!UBERON:0004457;2.53e-08;9!UBERON:0000042;2.53e-08;9!UBERON:0010260;6.36e-08;9!UBERON:0000970;1.62e-07;20!UBERON:0003688;2.14e-07;6!UBERON:0002358;2.14e-07;6!UBERON:0003684;2.14e-07;6!UBERON:0001178;2.14e-07;6!UBERON:0000310;3.44e-07;10!UBERON:0002104;3.96e-07;21!UBERON:0001723;7.70e-07;3!UBERON:0001033;7.70e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,8.38e-13,6;UBERON:0002331,1.27e-11,10;UBERON:0000358,1.27e-11,10;UBERON:0000307,1.27e-11,10;UBERON:0000091,1.27e-11,10;UBERON:0000087,1.27e-11,10;UBERON:0007010,1.27e-11,10;UBERON:0007806,1.27e-11,10;UBERON:0008780,1.27e-11,10;UBERON:0005728,1.27e-11,10;UBERON:0000020,8.88e-11,24;UBERON:0001032,8.88e-11,24;UBERON:0004456,8.88e-11,24;UBERON:0003566,1.46e-09,2;UBERON:0001777,1.46e-09,2;UBERON:0010260,6.20e-08,9;UBERON:0003688,2.44e-07,6;UBERON:0002358,2.44e-07,6;UBERON:0003684,2.44e-07,6;UBERON:0001178,2.44e-07,6;UBERON:0000970,3.53e-07,21;UBERON:0002104,3.53e-07,21;UBERON:0000310,3.75e-07,10;UBERON:0001723,6.56e-07,3;UBERON:0001033,6.56e-07,3;UBERON:0010056,6.56e-07,3 | |||
|phase1_expression=1.2717486548939,0.642301571672949,0.422863212287913,3.00219895059391,1.34088328328186,0.872338524100369,0,0,0.783556884599516,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0,0,0.23486899728753,0,0.561803226808994,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.717558542755448,0.640672166455702,0.211931901159562,0.900273288253207,0,0.257640540045629,0.18611685633159,0.506328996723799,2.04617710838517,1.00973509697646,0.368199594569197,6.62748832957129,0.355009592516614,1.0075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0.464775771478074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0.0925884451585296,2.28065813717227,1.03993478527958,0,0,1.87853910777315,0,0,0,0,0,0,0,0,0.93733833986777,2.51973192298289,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23179289394444,0,0,0,0,0,0,0,0,4.88359444852299,5.76268235746538,0,0,3.16780749173372,0,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0.410952645100767,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,2.23297027036899,3.37616341233737,1.40330047216537,0.128139149255701,6.65219423786715,0.804269605718038,0,0.616838775210622,1.42049380250502,0.657017248110473,0,0.348631135379878,0.362578348774867,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0,0,0.193341436584244,0,0,0.275673144969061,0,0,0.0852266274161009,1.69160867728801,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,1.01455188481352,0.92947049429925,0.845086807596724,1.86434757865267,4.81420300964294,1.426684205925,0,0,0,3.41525856389144,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0.715880777515084,0,0.311039587661807,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,1.55488378577335,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,3.38971111170799,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.305994652908965,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.895528817321244,0.701139929541673,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,0.343395705182793,1.01024846629776,1.26184898228651,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0.877136198314828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,1.70059936081346,0,0,0,0,0,0,3.3687002508852,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91064876540519,0.975726071789027,0,1.71488009437418,0,0,0,0,0.549451649953598,0,0,0,0,0,4.93188154818929,0,0,1.73858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0,0,1.71603825227734,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,3.94428905482962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0,0,0.0636471582781649,0,1.74173398317569,3.08009970976753,0,0,0,0.162806537221949,0,0,0,4.69281884806909,0,0,1.33151354837103,0,0 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| ||
|short_description=p5@PITX2 | |short_description=p5@PITX2 | ||
}} | }} |
Latest revision as of 17:23, 24 September 2015
Short description: | p5@PITX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PITX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000557119_5end |
EntrezGene: | PITX2 |
HGNC: | 9005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 5.62e-14 | 3 |
mesenchymal stem cell of umbilical cord | 8.38e-13 | 6 |
smooth muscle cell of the umbilical vein | 3.66e-10 | 2 |
keratocyte | 1.46e-09 | 2 |
migratory cranial neural crest cell | 1.46e-09 | 2 |
preadipocyte | 3.84e-09 | 12 |
adipocyte of omentum tissue | 9.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 8.38e-13 | 6 |
umbilical cord | 1.27e-11 | 10 |
blastocyst | 1.27e-11 | 10 |
blastula | 1.27e-11 | 10 |
bilaminar disc | 1.27e-11 | 10 |
inner cell mass | 1.27e-11 | 10 |
cleaving embryo | 1.27e-11 | 10 |
connecting stalk | 1.27e-11 | 10 |
inner cell mass derived epiblast | 1.27e-11 | 10 |
extraembryonic mesoderm | 1.27e-11 | 10 |
sense organ | 8.88e-11 | 24 |
sensory system | 8.88e-11 | 24 |
entire sense organ system | 8.88e-11 | 24 |
head connective tissue | 1.46e-09 | 2 |
substantia propria of cornea | 1.46e-09 | 2 |
umbilical blood vessel | 6.20e-08 | 9 |
omentum | 2.44e-07 | 6 |
peritoneum | 2.44e-07 | 6 |
abdominal cavity | 2.44e-07 | 6 |
visceral peritoneum | 2.44e-07 | 6 |
eye | 3.53e-07 | 21 |
visual system | 3.53e-07 | 21 |
breast | 3.75e-07 | 10 |
tongue | 6.56e-07 | 3 |
gustatory system | 6.56e-07 | 3 |
future tongue | 6.56e-07 | 3 |