FFCP PHASE1:Hg19::chr5:134788131..134788156,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=497189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34024 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZNK6 | |||
|association_with_transcript=-42bp_to_ENST00000537858,NM_001099221,uc003law.3_5end | |||
|cluster_id=chr5:134788131..134788156,- | |||
|coexpression_cluster_id=C440 | |||
|description=CAGE_peak_5_at_TIFAB_5end | |||
|id=chr5:134788131..134788156,- | |||
|ontology_enrichment_celltype=CL:0000451!4.75e-17!10;CL:0000763!7.25e-16!112;CL:0000049!7.25e-16!112;CL:0002619!4.75e-13!3;CL:0000784!8.61e-13!3;CL:0000037!3.56e-12!172;CL:0000566!3.56e-12!172;CL:0002009!1.73e-11!65;CL:0000988!3.92e-11!182;CL:0000990!4.74e-11!8;CL:0002194!2.43e-10!63;CL:0000576!2.43e-10!63;CL:0000040!2.43e-10!63;CL:0000559!2.43e-10!63;CL:0000557!3.17e-10!71;CL:0002032!8.72e-10!165;CL:0000837!8.72e-10!165;CL:0000839!5.44e-09!70;CL:0000766!4.93e-08!76;CL:0000453!1.00e-07!5;CL:0000738!3.51e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002619;8.26e-20;3!CL:0000784;1.27e-19;3!CL:0000451;4.42e-12;10!CL:0000235;1.53e-10;6!CL:0000840;2.64e-10;5!CL:0000990;3.67e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,7.88e-20,3;CL:0000784,9.53e-20,3;CL:0000763,1.37e-17,108;CL:0000049,1.37e-17,108;CL:0000037,6.11e-13,168;CL:0000988,3.22e-12,177;CL:0000451,4.26e-12,10;CL:0002032,2.01e-11,161;CL:0000837,2.01e-11,161;CL:0002194,4.77e-11,59;CL:0000576,4.77e-11,59;CL:0000040,4.77e-11,59;CL:0000559,4.77e-11,59;CL:0002009,1.13e-10,61;CL:0000235,1.57e-10,6;CL:0000840,2.64e-10,5;CL:0001029,2.64e-10,5;CL:0000839,7.70e-10,66;CL:0000557,1.09e-09,67;CL:0000766,5.48e-09,72;CL:0000990,3.67e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000049;3.31e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!3.17e-11!31;DOID:1240!1.65e-08!39;DOID:2531!2.55e-07!51;DOID:0060083!2.55e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.04e-16;31!DOID:1240;5.06e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.09e-16,31;DOID:1240,5.40e-13,39;DOID:2531,7.16e-10,51;DOID:0060083,7.16e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.22e-14!112;UBERON:0002405!2.64e-13!115;UBERON:0004177!3.42e-13!7;UBERON:0002390!8.52e-13!102;UBERON:0003061!8.52e-13!102;UBERON:0002106!8.72e-12!3;UBERON:0004854!8.72e-12!3;UBERON:0009034!8.72e-12!3;UBERON:0002095!8.72e-12!3;UBERON:0004782!8.72e-12!3;UBERON:0003281!8.72e-12!3;UBERON:0009664!8.72e-12!3;UBERON:0002296!8.72e-12!3;UBERON:0005602!8.72e-12!3;UBERON:0001179!8.72e-12!3;UBERON:0006293!8.72e-12!3;UBERON:0002371!5.95e-10!80;UBERON:0001474!5.33e-09!86;UBERON:0004765!4.00e-07!101;UBERON:0001434!4.00e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.38e-15;1!UBERON:0001961;2.38e-15;1!UBERON:0001744;2.38e-15;1!UBERON:0001042;2.38e-15;1!UBERON:0001735;2.38e-15;1!UBERON:0006562;2.48e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.66e-15,1;UBERON:0001961,3.66e-15,1;UBERON:0001744,3.66e-15,1;UBERON:0001735,3.66e-15,1;UBERON:0002405,6.91e-09,93;UBERON:0002371,1.71e-08,76;UBERON:0001474,7.72e-08,82;UBERON:0002193,1.47e-07,108;UBERON:0004765,4.23e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,1.11957737119962,2.91504299417082,0.77272670290256,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06366368415092,1.19245312152671,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0,0,0,20.7693557920205,0,0,0,4.81764225311099,19.7763713047227,1.27753871307098,0.687010689511529,0.307240764308458,1.11838053946208,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,37.8563553967885,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0.490696182767533,0,0,0,0,0.853533837553127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.515663103788617,0.199882311849858,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.193766729508018,0.434523000071005,0,0,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p5@TIFAB | |||
}} |
Latest revision as of 18:20, 24 September 2015
Short description: | p5@TIFAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TIFAB_5end |
Coexpression cluster: | C440_biphenotypic_acute_immature_splenic_B_myelodysplastic_Eosinophils |
Association with transcript: | -42bp_to_ENST00000537858, NM_001099221, uc003law.3_5end |
EntrezGene: | TIFAB |
HGNC: | 34024 |
UniProt: | Q6ZNK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 7.88e-20 | 3 |
plasmacytoid dendritic cell | 9.53e-20 | 3 |
myeloid cell | 1.37e-17 | 108 |
common myeloid progenitor | 1.37e-17 | 108 |
hematopoietic stem cell | 6.11e-13 | 168 |
hematopoietic cell | 3.22e-12 | 177 |
dendritic cell | 4.26e-12 | 10 |
hematopoietic oligopotent progenitor cell | 2.01e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-11 | 161 |
monopoietic cell | 4.77e-11 | 59 |
monocyte | 4.77e-11 | 59 |
monoblast | 4.77e-11 | 59 |
promonocyte | 4.77e-11 | 59 |
macrophage dendritic cell progenitor | 1.13e-10 | 61 |
macrophage | 1.57e-10 | 6 |
immature conventional dendritic cell | 2.64e-10 | 5 |
common dendritic progenitor | 2.64e-10 | 5 |
myeloid lineage restricted progenitor cell | 7.70e-10 | 66 |
granulocyte monocyte progenitor cell | 1.09e-09 | 67 |
myeloid leukocyte | 5.48e-09 | 72 |
conventional dendritic cell | 3.67e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.66e-15 | 1 |
mucosa-associated lymphoid tissue | 3.66e-15 | 1 |
lymphoid tissue | 3.66e-15 | 1 |
tonsillar ring | 3.66e-15 | 1 |
immune system | 6.91e-09 | 93 |
bone marrow | 1.71e-08 | 76 |
bone element | 7.72e-08 | 82 |
hemolymphoid system | 1.47e-07 | 108 |
skeletal element | 4.23e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.09e-16 | 31 |
leukemia | 5.40e-13 | 39 |
hematologic cancer | 7.16e-10 | 51 |
immune system cancer | 7.16e-10 | 51 |