FFCP PHASE1:Hg19::chr22:40297079..40297104,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:40297079..40297104,+ to FFCP PHASE1:Hg19::chr22:40297079..40297104,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9402 | |EntrezGene=9402 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4563 | |HGNC=4563 | ||
|TSSclassifier=strong | |||
|UniProt=O75791,F5H1V3,B7Z8F8,Q6FI14 | |UniProt=O75791,F5H1V3,B7Z8F8,Q6FI14 | ||
|association_with_transcript=0bp_to_ENST00000344138,ENST00000543252,ENST00000544006,NM_004810,uc003ayh.1,uc003ayi.2,uc011aom.1,uc011aon.1_5end | |||
|cluster_id=chr22:40297079..40297104,+ | |||
|description=CAGE_peak_2_at_GRAP2_5end | |||
|id=chr22:40297079..40297104,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.92e-37!172;CL:0000566!3.92e-37!172;CL:0002032!4.94e-35!165;CL:0000837!4.94e-35!165;CL:0000542!7.49e-35!53;CL:0000051!7.49e-35!53;CL:0000838!6.29e-34!52;CL:0000988!2.30e-33!182;CL:0000738!1.82e-32!140;CL:0002031!3.61e-28!124;CL:0002087!3.13e-26!119;CL:0000791!1.34e-21!18;CL:0000789!1.34e-21!18;CL:0002420!1.34e-21!18;CL:0002419!1.34e-21!18;CL:0000790!1.34e-21!18;CL:0000084!3.10e-19!25;CL:0000827!3.10e-19!25;CL:0000625!2.38e-14!11;CL:0000945!3.65e-13!24;CL:0000826!3.65e-13!24;CL:0000236!1.96e-10!14;CL:0000763!7.27e-09!112;CL:0000049!7.27e-09!112;CL:0000624!5.01e-08!6;CL:0002274!9.74e-08!5;CL:0000457!9.74e-08!5;CL:0002191!9.74e-08!5;CL:0000097!9.74e-08!5;CL:0000831!9.74e-08!5;CL:0002028!9.74e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.87e-31;18!CL:0000789;3.87e-31;18!CL:0002419;3.87e-31;18!CL:0000084;1.31e-28;25!CL:0000542;8.72e-27;53!CL:0000625;2.04e-20;11!CL:0000236;1.79e-16;13!CL:0000945;3.39e-16;24!CL:0000624;4.31e-11;6!CL:0000097;1.09e-10;5!CL:0002087;1.05e-09;104!CL:0000738;3.82e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.68e-49,53;CL:0000051,8.68e-49,53;CL:0000838,1.99e-47,52;CL:0000037,8.45e-36,168;CL:0000988,6.20e-33,177;CL:0002032,1.03e-32,161;CL:0000837,1.03e-32,161;CL:0000738,1.94e-31,136;CL:0000791,3.67e-31,18;CL:0000789,3.67e-31,18;CL:0002420,3.67e-31,18;CL:0002419,3.67e-31,18;CL:0000790,3.67e-31,18;CL:0002031,4.25e-29,120;CL:0000084,1.29e-28,25;CL:0000827,1.29e-28,25;CL:0002087,2.75e-26,115;CL:0000625,1.96e-20,11;CL:0000945,3.11e-16,24;CL:0000826,3.11e-16,24;CL:0000236,4.22e-15,14;CL:0000624,4.20e-11,6;CL:0000097,1.12e-10,5;CL:0002028,1.12e-10,5;CL:0000134,1.49e-07,354;CL:0002320,4.32e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;3.87e-31;18!CL:0000051;8.72e-27;53 | |||
|ontology_enrichment_disease=DOID:1036!4.95e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;6.40e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.30e-07,51;DOID:0060083,5.30e-07,51;DOID:1036,6.40e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-15!115;UBERON:0002390!2.00e-09!102;UBERON:0003061!2.00e-09!102;UBERON:0004177!9.01e-09!7;UBERON:0002193!9.19e-09!112;UBERON:0000178!1.18e-08!15;UBERON:0000179!1.18e-08!15;UBERON:0000463!1.18e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.37e-13;15!UBERON:0000179;7.37e-13;15!UBERON:0000463;7.37e-13;15!UBERON:0002390;3.98e-10;32!UBERON:0004177;1.49e-09;5!UBERON:0005057;1.49e-09;5!UBERON:0002193;5.66e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.14e-13,15;UBERON:0000179,8.14e-13,15;UBERON:0000463,8.14e-13,15;UBERON:0004177,3.36e-12,7;UBERON:0005057,3.36e-12,7;UBERON:0002370,4.29e-08,4;UBERON:0005058,4.29e-08,4;UBERON:0009113,4.29e-08,4;UBERON:0003295,4.29e-08,4;UBERON:0005562,4.29e-08,4;UBERON:0002390,5.90e-08,98;UBERON:0003061,5.90e-08,98;UBERON:0002193,7.70e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.55830144377054,6.56804715599566,7.63494578742689,2.36018566109342,4.60595277716655,3.2511385896376,0,0,0,0,0.142169232487422,0,3.32397245119126,1.80490002723128,3.25516306073778,2.23915474239924,5.50619232232265,1.54545340580512,0.145398238779565,0,0,0.929716147622738,0,0,0.575384784644301,0,0.236482229888585,0,1.93645405075148,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0.65156653411535,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,8.79981222306614,13.1073266702912,16.9006758234075,10.2415253415962,15.2150475073685,12.0698012390441,14.542987201267,8.58648379081828,3.98449078376614,4.11066032559657,2.6759125968766,0,2.80254281490768,0,22.0314942527493,12.5763444079733,15.0089094269642,32.6013666011822,20.8590250645498,24.1458380924714,29.2240092611867,13.1464339124505,15.9087190036412,16.6150420937716,31.9548559242718,18.4451500404972,14.8267656218261,12.9905944636904,5.80335037350282,16.808578972633,35.1439154694083,53.7757064460323,35.5420780936921,15.0701425787763,11.8798353016596,20.2740192834752,31.8804811944574,24.2109714886314,29.9498388773953,17.1081368000707,26.9529463149213,32.5085992332223,19.9889162483753,22.4938389441816,32.8451198768419,18.7494271199001,12.0348088102578,20.4202409474747,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0.324547393654683,0.870648686496336,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2170608771714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5891413221728,41.9991030243088,24.0500614027296,25.0768718945513,33.9592145916962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14715032776051,6.30498432646167,11.2126338926949,10.0107568298204,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,16.1279060375852,5.82428342210265,9.81893531791688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,2.87578996127391,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0,0,14.2085330585007,18.351292971417,9.68400218196076,21.440859791201,20.1567513812235,19.4541993357815,14.040817368191,14.2762531732969,0,0,0,6.68891430452587,0,7.043042491493,7.01475600006818,6.18696051441731,0.191505370132367,0,0,0,1.36940807419915,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,19.693983831634,2.70455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,7.45966571934099,0,0,0.369254416383208,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0.31900115973192,0,0,14.3070617474031,0.784901281975124,9.30785418640876,0.225595660617181,1.76456280885966,1.00692952185506,4.74384331810463,12.7149263184303,0,0,0,0,0,0.884575645033392,1.22206028986725,0,0,0,0.269604531922708,0,0.234264445725339,1.45963831372533,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,0,0,0,0,0.126621591911757,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,13.4630597984597,0,0.136203406111576,0,0,0,0,0,0,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,13.2168958406436,0,0,0.146552233678082,0,0.129282956361551,0,0,0,3.41719720216623,0.157204305099666,2.48543433208317,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,1.15761237161917,0.874238242015829,0,0.980593287015622,0,0.196308467114945,0.891139200981258,0,0,2.06764619555678,2.77168918286382,36.7783453803738,0,0,0,0,1.37618785021362,0.286679166302903,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,1.49263787330687,0.952257725854961,44.0496365081562,67.1027661538224,0,0.12729431655633,0.202117188958219,0.217716747896961,0,9.56399152807143,0.78894425931944,0.665320713092027,0,0,0,0,0,1.22241444182866,0,1.99727032255654,14.8942607257359,3.8468219076388 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| ||
|short_description=p2@GRAP2 | |||
}} | }} |
Latest revision as of 19:17, 24 September 2015
Short description: | p2@GRAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344138, ENST00000543252, ENST00000544006, NM_004810, uc003ayh.1, uc003ayi.2, uc011aom.1, uc011aon.1_5end |
EntrezGene: | GRAP2 |
HGNC: | 4563 |
UniProt: | O75791F5H1V3B7Z8F8Q6FI14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.68e-49 | 53 |
common lymphoid progenitor | 8.68e-49 | 53 |
lymphoid lineage restricted progenitor cell | 1.99e-47 | 52 |
hematopoietic stem cell | 8.45e-36 | 168 |
hematopoietic cell | 6.20e-33 | 177 |
hematopoietic oligopotent progenitor cell | 1.03e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-32 | 161 |
leukocyte | 1.94e-31 | 136 |
mature alpha-beta T cell | 3.67e-31 | 18 |
alpha-beta T cell | 3.67e-31 | 18 |
immature T cell | 3.67e-31 | 18 |
mature T cell | 3.67e-31 | 18 |
immature alpha-beta T cell | 3.67e-31 | 18 |
hematopoietic lineage restricted progenitor cell | 4.25e-29 | 120 |
T cell | 1.29e-28 | 25 |
pro-T cell | 1.29e-28 | 25 |
nongranular leukocyte | 2.75e-26 | 115 |
CD8-positive, alpha-beta T cell | 1.96e-20 | 11 |
lymphocyte of B lineage | 3.11e-16 | 24 |
pro-B cell | 3.11e-16 | 24 |
B cell | 4.22e-15 | 14 |
CD4-positive, alpha-beta T cell | 4.20e-11 | 6 |
mast cell | 1.12e-10 | 5 |
basophil mast progenitor cell | 1.12e-10 | 5 |
mesenchymal cell | 1.49e-07 | 354 |
connective tissue cell | 4.32e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 8.14e-13 | 15 |
haemolymphatic fluid | 8.14e-13 | 15 |
organism substance | 8.14e-13 | 15 |
hemopoietic organ | 3.36e-12 | 7 |
immune organ | 3.36e-12 | 7 |
thymus | 4.29e-08 | 4 |
hemolymphoid system gland | 4.29e-08 | 4 |
thymic region | 4.29e-08 | 4 |
pharyngeal gland | 4.29e-08 | 4 |
thymus primordium | 4.29e-08 | 4 |
hematopoietic system | 5.90e-08 | 98 |
blood island | 5.90e-08 | 98 |
hemolymphoid system | 7.70e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.30e-07 | 51 |
immune system cancer | 5.30e-07 | 51 |
chronic leukemia | 6.40e-07 | 8 |