FFCP PHASE1:Hg19::chr4:114682310..114682325,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=817 | |EntrezGene=817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1462 | |HGNC=1462 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBG7 | |UniProt=E9PBG7 | ||
|association_with_transcript=13bp_to_ENST00000505990_5end | |association_with_transcript=13bp_to_ENST00000505990_5end | ||
|cluster_id=chr4:114682310..114682325,- | |||
|coexpression_cluster_id=C2772 | |||
|description=CAGE_peak_6_at_CAMK2D_5end | |description=CAGE_peak_6_at_CAMK2D_5end | ||
|id=chr4:114682310..114682325,- | |id=chr4:114682310..114682325,- | ||
|ontology_enrichment_celltype=CL:0000055!1.29e-14!180;CL:0000057!1.17e-11!75;CL:0000048!1.63e-08!430;CL:0002620!4.33e-08!23;CL:0000680!1.40e-07!57;CL:0000056!1.40e-07!57;CL:0000355!1.40e-07!57;CL:0000723!1.93e-07!436 | |ontology_enrichment_celltype=CL:0000055!1.29e-14!180;CL:0000057!1.17e-11!75;CL:0000048!1.63e-08!430;CL:0002620!4.33e-08!23;CL:0000680!1.40e-07!57;CL:0000056!1.40e-07!57;CL:0000355!1.40e-07!57;CL:0000723!1.93e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.27e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.81e-13,76;CL:0000048,1.15e-11,427;CL:0000723,7.57e-11,433;CL:0002620,6.57e-10,23;CL:0000034,8.15e-10,441;CL:0002320,1.51e-07,361;CL:0000680,5.75e-07,58;CL:0000056,5.75e-07,58;CL:0000355,5.75e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.98e-12!83;UBERON:0002329!8.98e-12!83;UBERON:0003077!8.98e-12!83;UBERON:0003059!8.98e-12!83;UBERON:0007282!8.98e-12!83;UBERON:0009618!8.98e-12!83;UBERON:0007285!8.98e-12!83;UBERON:0004290!7.45e-10!70;UBERON:0007100!1.95e-09!27;UBERON:0002385!2.29e-09!63;UBERON:0001015!2.29e-09!63;UBERON:0000383!2.29e-09!63;UBERON:0001134!9.81e-09!61;UBERON:0002036!9.81e-09!61;UBERON:0003082!9.81e-09!61;UBERON:0000948!7.26e-08!24;UBERON:0005498!7.26e-08!24;UBERON:0004140!7.26e-08!24;UBERON:0009881!7.26e-08!24;UBERON:0004141!7.26e-08!24;UBERON:0003084!7.26e-08!24;UBERON:0007005!7.26e-08!24;UBERON:0004139!7.26e-08!24;UBERON:0004291!7.26e-08!24;UBERON:0000486!1.17e-07!82;UBERON:0002204!3.41e-07!167;UBERON:0000467!5.70e-07!625;UBERON:0005256!5.80e-07!143;UBERON:0000479!7.04e-07!787;UBERON:0000480!8.75e-07!626 | |ontology_enrichment_uberon=UBERON:0000914!8.98e-12!83;UBERON:0002329!8.98e-12!83;UBERON:0003077!8.98e-12!83;UBERON:0003059!8.98e-12!83;UBERON:0007282!8.98e-12!83;UBERON:0009618!8.98e-12!83;UBERON:0007285!8.98e-12!83;UBERON:0004290!7.45e-10!70;UBERON:0007100!1.95e-09!27;UBERON:0002385!2.29e-09!63;UBERON:0001015!2.29e-09!63;UBERON:0000383!2.29e-09!63;UBERON:0001134!9.81e-09!61;UBERON:0002036!9.81e-09!61;UBERON:0003082!9.81e-09!61;UBERON:0000948!7.26e-08!24;UBERON:0005498!7.26e-08!24;UBERON:0004140!7.26e-08!24;UBERON:0009881!7.26e-08!24;UBERON:0004141!7.26e-08!24;UBERON:0003084!7.26e-08!24;UBERON:0007005!7.26e-08!24;UBERON:0004139!7.26e-08!24;UBERON:0004291!7.26e-08!24;UBERON:0000486!1.17e-07!82;UBERON:0002204!3.41e-07!167;UBERON:0000467!5.70e-07!625;UBERON:0005256!5.80e-07!143;UBERON:0000479!7.04e-07!787;UBERON:0000480!8.75e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.60e-09;25!UBERON:0000948;1.83e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.59e-10,27;UBERON:0007524,3.64e-09,73;UBERON:0002329,4.09e-09,71;UBERON:0003059,4.09e-09,71;UBERON:0007282,4.09e-09,71;UBERON:0004290,4.09e-09,71;UBERON:0009618,4.09e-09,71;UBERON:0003077,8.37e-09,72;UBERON:0007285,8.37e-09,72;UBERON:0002385,9.91e-09,64;UBERON:0001015,9.91e-09,64;UBERON:0000383,9.91e-09,64;UBERON:0002204,1.20e-08,167;UBERON:0001134,5.57e-08,62;UBERON:0002036,5.57e-08,62;UBERON:0003082,5.57e-08,62;UBERON:0000948,7.48e-08,24;UBERON:0005498,7.48e-08,24;UBERON:0004140,7.48e-08,24;UBERON:0009881,7.48e-08,24;UBERON:0004141,7.48e-08,24;UBERON:0003084,7.48e-08,24;UBERON:0007005,7.48e-08,24;UBERON:0004139,7.48e-08,24;UBERON:0004291,7.48e-08,24;UBERON:0000486,9.46e-08,83;UBERON:0007503,1.45e-07,78;UBERON:0002384,1.59e-07,371;UBERON:0000479,6.03e-07,773;UBERON:0003102,8.33e-07,99 | |||
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| ||
|short_description=p6@CAMK2D | |short_description=p6@CAMK2D | ||
}} | }} |
Latest revision as of 19:20, 24 September 2015
Short description: | p6@CAMK2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CAMK2D_5end |
Coexpression cluster: | C2772_mesenchymal_Fibroblast_Cardiac_Smooth_Chondrocyte_Anulus_tenocyte |
Association with transcript: | 13bp_to_ENST00000505990_5end |
EntrezGene: | CAMK2D |
HGNC: | 1462 |
UniProt: | E9PBG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.81e-13 | 76 |
multi fate stem cell | 1.15e-11 | 427 |
somatic stem cell | 7.57e-11 | 433 |
skin fibroblast | 6.57e-10 | 23 |
stem cell | 8.15e-10 | 441 |
connective tissue cell | 1.51e-07 | 361 |
muscle precursor cell | 5.75e-07 | 58 |
myoblast | 5.75e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.75e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 7.59e-10 | 27 |
dense mesenchyme tissue | 3.64e-09 | 73 |
somite | 4.09e-09 | 71 |
presomitic mesoderm | 4.09e-09 | 71 |
presumptive segmental plate | 4.09e-09 | 71 |
dermomyotome | 4.09e-09 | 71 |
trunk paraxial mesoderm | 4.09e-09 | 71 |
paraxial mesoderm | 8.37e-09 | 72 |
presumptive paraxial mesoderm | 8.37e-09 | 72 |
muscle tissue | 9.91e-09 | 64 |
musculature | 9.91e-09 | 64 |
musculature of body | 9.91e-09 | 64 |
musculoskeletal system | 1.20e-08 | 167 |
skeletal muscle tissue | 5.57e-08 | 62 |
striated muscle tissue | 5.57e-08 | 62 |
myotome | 5.57e-08 | 62 |
heart | 7.48e-08 | 24 |
primitive heart tube | 7.48e-08 | 24 |
primary heart field | 7.48e-08 | 24 |
anterior lateral plate mesoderm | 7.48e-08 | 24 |
heart tube | 7.48e-08 | 24 |
heart primordium | 7.48e-08 | 24 |
cardiac mesoderm | 7.48e-08 | 24 |
cardiogenic plate | 7.48e-08 | 24 |
heart rudiment | 7.48e-08 | 24 |
multilaminar epithelium | 9.46e-08 | 83 |
epithelial vesicle | 1.45e-07 | 78 |
connective tissue | 1.59e-07 | 371 |
tissue | 6.03e-07 | 773 |
surface structure | 8.33e-07 | 99 |