FFCP PHASE1:Hg19::chr4:114900167..114900191,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:114900167..114900191,- to FFCP PHASE1:Hg19::chr4:114900167..114900191,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79642 | |EntrezGene=79642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26286 | |HGNC=26286 | ||
|TSSclassifier=strong | |||
|UniProt=Q1HA39 | |UniProt=Q1HA39 | ||
|association_with_transcript=-15bp_to_ENST00000541197_5end | |||
|cluster_id=chr4:114900167..114900191,- | |||
|coexpression_cluster_id=C4362 | |||
|description=CAGE_peak_4_at_ARSJ_5end | |||
|id=chr4:114900167..114900191,- | |||
|ontology_enrichment_celltype=CL:0000055!2.61e-28!180;CL:0000680!5.03e-19!57;CL:0000056!5.03e-19!57;CL:0000355!5.03e-19!57;CL:0000183!2.96e-18!59;CL:0000187!8.47e-18!54;CL:0000192!1.09e-17!42;CL:0000514!1.09e-17!42;CL:0000393!6.46e-15!60;CL:0000211!6.46e-15!60;CL:0000222!3.66e-14!119;CL:0000359!2.26e-12!32;CL:0000057!3.74e-12!75;CL:0000220!5.49e-12!246;CL:0002321!1.32e-11!248;CL:0002620!5.29e-10!23;CL:0002371!4.96e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.52e-19;32!CL:0000192;9.18e-17;43!CL:0002556;1.32e-12;6!CL:0000187;7.64e-09;55!CL:0002620;1.09e-07;23!CL:0000393;1.15e-07;61!CL:0000211;1.15e-07;61!CL:0002592;1.44e-07;3!CL:0002564;4.76e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.92e-24,43;CL:0000514,5.92e-24,43;CL:0000359,1.14e-20,32;CL:0000680,2.11e-19,58;CL:0000056,2.11e-19,58;CL:0000355,2.11e-19,58;CL:0000187,5.72e-19,55;CL:0000393,2.13e-16,61;CL:0000211,2.13e-16,61;CL:0002556,3.00e-12,6;CL:0000222,5.35e-11,121;CL:0000057,9.25e-10,76;CL:0000048,4.11e-08,427;CL:0000723,8.89e-08,433;CL:0002620,9.57e-08,23;CL:0002592,1.13e-07,3;CL:0000034,2.39e-07,441;CL:0002564,6.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;9.18e-17;43!CL:0000355;1.22e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.50e-07;5!DOID:450;5.50e-07;5!DOID:66;5.50e-07;5!DOID:423;5.50e-07;5!DOID:0080000;5.50e-07;5!DOID:11722;5.50e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.44e-07,5;DOID:450,4.44e-07,5;DOID:66,4.44e-07,5;DOID:423,4.44e-07,5;DOID:0080000,4.44e-07,5;DOID:11722,4.44e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.87e-21!83;UBERON:0002329!2.87e-21!83;UBERON:0003077!2.87e-21!83;UBERON:0003059!2.87e-21!83;UBERON:0007282!2.87e-21!83;UBERON:0009618!2.87e-21!83;UBERON:0007285!2.87e-21!83;UBERON:0005256!5.59e-18!143;UBERON:0004290!3.54e-17!70;UBERON:0000490!8.70e-17!138;UBERON:0001134!1.60e-16!61;UBERON:0002036!1.60e-16!61;UBERON:0003082!1.60e-16!61;UBERON:0002385!2.38e-16!63;UBERON:0001015!2.38e-16!63;UBERON:0000383!2.38e-16!63;UBERON:0000486!1.99e-15!82;UBERON:0002049!3.31e-15!79;UBERON:0007798!3.31e-15!79;UBERON:0001981!1.50e-14!60;UBERON:0007500!1.50e-14!60;UBERON:0004537!1.50e-14!60;UBERON:0006965!1.50e-14!60;UBERON:0001637!2.29e-14!42;UBERON:0003509!2.29e-14!42;UBERON:0004572!2.29e-14!42;UBERON:0004872!1.18e-13!84;UBERON:0000475!2.50e-13!365;UBERON:0000055!1.50e-12!69;UBERON:0003914!5.05e-12!118;UBERON:0003102!7.06e-12!95;UBERON:0004573!1.16e-11!33;UBERON:0004571!1.16e-11!33;UBERON:0000481!2.55e-11!347;UBERON:0004535!2.59e-11!110;UBERON:0002100!1.23e-10!216;UBERON:0001009!1.86e-10!113;UBERON:0000119!3.99e-10!312;UBERON:0000483!5.75e-10!309;UBERON:0003104!1.61e-09!238;UBERON:0009142!1.61e-09!238;UBERON:0000477!2.09e-09!286;UBERON:0000468!1.75e-08!659;UBERON:0000467!6.42e-08!625;UBERON:0000480!8.37e-08!626;UBERON:0000947!2.57e-07!21;UBERON:0010191!2.57e-07!21;UBERON:0004111!5.83e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;3.07e-14;16!UBERON:0001758;1.32e-12;6!UBERON:0003672;1.32e-12;6!UBERON:0003129;1.08e-10;7!UBERON:0011137;5.08e-09;11!UBERON:0010323;5.08e-09;11!UBERON:0001637;6.91e-09;42!UBERON:0003509;6.91e-09;42!UBERON:0004572;6.91e-09;42!UBERON:0001434;3.20e-08;36!UBERON:0004573;9.01e-08;33!UBERON:0004571;9.01e-08;33!UBERON:0003498;1.44e-07;3!UBERON:0005985;1.44e-07;3!UBERON:0001621;1.44e-07;3!UBERON:0002242;4.76e-07;3!UBERON:0011135;5.50e-07;5!UBERON:0002216;5.50e-07;5!UBERON:0011134;5.50e-07;5!UBERON:0002209;5.50e-07;5!UBERON:0002213;5.50e-07;5!UBERON:0007844;5.50e-07;5!UBERON:0011138;5.50e-07;5!UBERON:0001130;5.50e-07;5!UBERON:0001066;5.50e-07;5!UBERON:0001468;5.50e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.15e-17,62;UBERON:0002036,1.15e-17,62;UBERON:0003082,1.15e-17,62;UBERON:0002385,7.03e-17,64;UBERON:0001015,7.03e-17,64;UBERON:0000383,7.03e-17,64;UBERON:0007524,2.40e-15,73;UBERON:0002329,1.72e-14,71;UBERON:0003059,1.72e-14,71;UBERON:0007282,1.72e-14,71;UBERON:0004290,1.72e-14,71;UBERON:0009618,1.72e-14,71;UBERON:0003077,3.44e-14,72;UBERON:0007285,3.44e-14,72;UBERON:0000075,5.30e-14,16;UBERON:0007503,1.16e-13,78;UBERON:0011137,1.92e-13,14;UBERON:0001637,1.06e-12,42;UBERON:0003509,1.06e-12,42;UBERON:0004572,1.06e-12,42;UBERON:0001758,3.00e-12,6;UBERON:0003672,3.00e-12,6;UBERON:0002204,7.40e-12,167;UBERON:0003104,1.72e-11,160;UBERON:0009142,1.72e-11,160;UBERON:0000486,2.25e-11,83;UBERON:0007500,5.38e-11,59;UBERON:0001981,5.38e-11,59;UBERON:0004537,5.38e-11,59;UBERON:0006965,5.38e-11,59;UBERON:0003498,6.90e-11,5;UBERON:0005985,6.90e-11,5;UBERON:0005256,7.31e-11,122;UBERON:0003102,1.74e-10,99;UBERON:0003129,2.16e-10,7;UBERON:0002049,6.96e-10,78;UBERON:0007798,6.96e-10,78;UBERON:0000490,1.08e-09,148;UBERON:0000055,7.81e-09,68;UBERON:0010323,8.41e-09,11;UBERON:0004573,1.26e-08,33;UBERON:0004571,1.26e-08,33;UBERON:0004872,5.71e-08,83;UBERON:0001621,1.13e-07,3;UBERON:0011135,5.51e-07,5;UBERON:0002216,5.51e-07,5;UBERON:0011134,5.51e-07,5;UBERON:0002209,5.51e-07,5;UBERON:0002213,5.51e-07,5;UBERON:0005856,5.51e-07,5;UBERON:0005866,5.51e-07,5;UBERON:0005863,5.51e-07,5;UBERON:0007844,5.51e-07,5;UBERON:0011138,5.51e-07,5;UBERON:0001130,5.51e-07,5;UBERON:0001066,5.51e-07,5;UBERON:0001468,5.51e-07,5;UBERON:0002242,6.75e-07,3;UBERON:0003068,6.75e-07,3;UBERON:0002328,6.75e-07,3;UBERON:0004880,6.75e-07,3;UBERON:0004535,8.72e-07,109 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0,0.866364470720326,1.65698687863958,2.01697543935533,1.20538905604795,0,0.487932798790507,0.369363174230364,1.02000345622126,0,0,0.136874425072884,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,2.1686349143074,1.00267582127178,0.289693037921647,0.795285947051099,0.486634870302636,0.850813354476611,0.665188192387692,0.966182642624386,0.196468613246569,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0.626984899610432,0.258416759169329,0.35576626268671,0,0,0,0,2.20597848207521,0.81014194788176,0.446498641420399,0.673588117878509,0.112611480483322,0,0.949265659568129,0.549605231791222,0,0,0,0,0.759783069987479,0.926864265692532,0.860509862246441,0,0,0,0.49333509683432,0.311211035399766,0.67355336034844,1.14423332179421,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.448346041655403,0.23486899728753,0.809364721840658,0.98315564691574,1.02077085627447,0.368502951935304,0.619954687054593,1.18800285728205,3.4617370098998,0,0,1.0100166837244,1.00094815897571,1.10825646193673,2.63386572528503,3.67785354958824,1.65261864797256,1.36118619792025,1.79389635688862,1.49490172172997,2.11931901159562,1.20036438433761,0.618315175430633,0.772921620136887,0.37223371266318,1.18143432568886,0.779496041289589,3.02920529092937,1.56484827691909,2.7479829659198,8.52023022039874,2.41805035746337,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0.8231480226628,0,0,0,0,0,0.245976877086227,0.514703430895577,0.109750285408626,0,0.100528972411631,0.185176890317059,2.6064664424826,1.03993478527958,0,0.115930404975077,1.40890433082986,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0.387815147273333,0,0,2.12750493267896,0,0.514414748524284,2.83698264046557,0.266422179016099,1.28680194292333,0.542621605391443,0,0.325736184293735,3.19852753868291,0,0,0,0.299918973546171,0,0,0,19.1699884393266,27.5668646001873,0,3.04040744001916,0.410952645100767,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,2.33113834266366,1.00034104211935,1.62759014219841,1.45579603071565,1.96271887676878,0.630809660135739,1.40569697991256,2.40756879782175,0,0,2.65690239414175,1.65932251687533,1.65078867489357,0.195801157462741,0.343143423810856,0,0,0,0.606255142892519,0,0.604780586659361,0,0.153461973288062,0,0,0,0.321707842287215,0,0.462629081407967,0,0.164254312027618,0,0.116210378459959,0,0.40101294060657,0.368323955743585,1.14814448164607,0.364182336013434,2.62248829918848,0,0.15403067420883,0,0,0.422206515571503,0,0,1.0795795805107,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0.183138929636687,0,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.275673144969061,0.322260734604821,0,0.170453254832202,0.178064071293475,0.165284915360978,0.192190067365106,0,0.4046311234222,0.464845549297286,3.77774816196768,2.0911118104818,0.616067160352178,1.06461206063404,0,2.7798632865588,3.57812216854978,0,3.48017367190598,1.90630193923825,2.303080121802,3.42351190427136,0.318203247925937,0.78494864019923,1.79872457583315,0.274537029736055,0.589062011728432,2.22400729730648,3.17020642346017,1.68503382495592,0.48763373908959,0.243713489631284,0,0.9554993798559,1.83827061539827,1.13008116620243,0,1.32687795048244,3.06915619677634,0.578775534266688,1.9676842561399,2.84074527747786,1.54911749049875,0,0.286822704408103,1.47373561519682,3.92338156629375,0.709522128141196,0,0.329294892959902,1.13841952129715,0,0.384888450902048,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,14.5512693607993,0.307160702099232,0,0,0.333926115068718,0,0,0.398495976502139,0,0.503865495708552,1.02268682502155,0,8.3980688668688,0.269605053441981,0,0,0.0986434056369336,0,3.33410970433911,0,0.185536196323703,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0.442317039724898,1.18219047581419,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.687944129886466,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0,0.0801588202515337,0.213452994739353,0,0,0,0.514784993585894,0,0,0,0.271808412147228,0.104602846312333,1.93796613509011,0,0,0,0,0,0,0,0.2291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| ||
|short_description=p4@ARSJ | |||
}} | }} |
Latest revision as of 19:45, 24 September 2015
Short description: | p4@ARSJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARSJ_5end |
Coexpression cluster: | C4362_Multipotent_bone_basal_amniotic_Myoblast_Nucleus_Smooth |
Association with transcript: | -15bp_to_ENST00000541197_5end |
EntrezGene: | ARSJ |
HGNC: | 26286 |
UniProt: | Q1HA39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.92e-24 | 43 |
smooth muscle myoblast | 5.92e-24 | 43 |
vascular associated smooth muscle cell | 1.14e-20 | 32 |
muscle precursor cell | 2.11e-19 | 58 |
myoblast | 2.11e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.11e-19 | 58 |
muscle cell | 5.72e-19 | 55 |
electrically responsive cell | 2.13e-16 | 61 |
electrically active cell | 2.13e-16 | 61 |
fibroblast of periodontium | 3.00e-12 | 6 |
mesodermal cell | 5.35e-11 | 121 |
fibroblast | 9.25e-10 | 76 |
multi fate stem cell | 4.11e-08 | 427 |
somatic stem cell | 8.89e-08 | 433 |
skin fibroblast | 9.57e-08 | 23 |
smooth muscle cell of the coronary artery | 1.13e-07 | 3 |
stem cell | 2.39e-07 | 441 |
nucleus pulposus cell of intervertebral disc | 6.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.44e-07 | 5 |
myotonic disease | 4.44e-07 | 5 |
muscle tissue disease | 4.44e-07 | 5 |
myopathy | 4.44e-07 | 5 |
muscular disease | 4.44e-07 | 5 |
myotonic dystrophy | 4.44e-07 | 5 |