FFCP PHASE1:Hg19::chr14:60072110..60072126,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6252 | |EntrezGene=6252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10467 | |HGNC=10467 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=100bp_to_ENST00000490111_5end | |association_with_transcript=100bp_to_ENST00000490111_5end | ||
|cluster_id=chr14:60072110..60072126,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_13_at_RTN1_5end | |description=CAGE_peak_13_at_RTN1_5end | ||
|id=chr14:60072110..60072126,- | |id=chr14:60072110..60072126,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.14e-15;3!UBERON:0006238;9.26e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;2.96e-51;20!UBERON:0002619;1.06e-46;22!UBERON:0000956;3.48e-41;25!UBERON:0000203;3.48e-41;25!UBERON:0002791;7.44e-38;32!UBERON:0001869;7.44e-38;32!UBERON:0003528;1.42e-32;34!UBERON:0002020;1.42e-32;34!UBERON:0001893;9.19e-32;34!UBERON:0000955;1.43e-22;68!UBERON:0002780;6.29e-21;41!UBERON:0001890;6.29e-21;41!UBERON:0001872;1.80e-20;5!UBERON:0002021;2.43e-20;5!UBERON:0001017;1.77e-19;75!UBERON:0000073;3.16e-18;53!UBERON:0002616;3.16e-18;53!UBERON:0000200;1.75e-17;6!UBERON:0001016;1.44e-16;83!UBERON:0001871;4.92e-15;6!UBERON:0002581;3.08e-12;1!UBERON:0001874;3.08e-12;1!UBERON:0002037;2.71e-08;6!UBERON:0002771;4.55e-07;2!UBERON:0002702;5.26e-07;2!UBERON:0001876;5.90e-07;2!UBERON:0011216;6.27e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.34e-51,20;UBERON:0002619,8.51e-47,22;UBERON:0000956,2.87e-41,25;UBERON:0000203,2.87e-41,25;UBERON:0002791,5.93e-39,32;UBERON:0001869,5.93e-39,32;UBERON:0000955,2.44e-38,68;UBERON:0006238,2.44e-38,68;UBERON:0003528,1.19e-36,34;UBERON:0002020,1.19e-36,34;UBERON:0001893,1.19e-36,34;UBERON:0001017,2.26e-36,81;UBERON:0000073,1.09e-32,53;UBERON:0002616,1.09e-32,53;UBERON:0001016,1.28e-32,89;UBERON:0001049,6.99e-31,56;UBERON:0005068,6.99e-31,56;UBERON:0006241,6.99e-31,56;UBERON:0007135,6.99e-31,56;UBERON:0002780,2.57e-30,41;UBERON:0001890,2.57e-30,41;UBERON:0003080,2.57e-30,41;UBERON:0006240,2.57e-30,41;UBERON:0003075,1.15e-20,82;UBERON:0007284,1.15e-20,82;UBERON:0001872,1.53e-20,5;UBERON:0002021,1.63e-20,5;UBERON:0003056,4.42e-20,61;UBERON:0002346,1.23e-19,86;UBERON:0000200,1.80e-17,6;UBERON:0004121,2.98e-16,171;UBERON:0000924,2.98e-16,171;UBERON:0006601,2.98e-16,171;UBERON:0010371,5.82e-16,104;UBERON:0001871,5.82e-15,6;UBERON:0007023,2.59e-12,114;UBERON:0002581,3.08e-12,1;UBERON:0010314,3.26e-12,132;UBERON:0001874,4.81e-12,1;UBERON:0011216,6.20e-12,223;UBERON:0002037,2.91e-08,6;UBERON:0006215,2.91e-08,6;UBERON:0000025,8.01e-08,192;UBERON:0002771,4.56e-07,2;UBERON:0002702,5.41e-07,2;UBERON:0001876,6.07e-07,2 | |||
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|short_description=p13@RTN1 | |short_description=p13@RTN1 | ||
}} | }} |
Latest revision as of 19:50, 24 September 2015
Short description: | p13@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RTN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 100bp_to_ENST00000490111_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data