FFCP PHASE1:Hg19::chr1:209878218..209878229,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:209878218..209878229,+ to FFCP PHASE1:Hg19::chr1:209878218..209878229,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3290 | |EntrezGene=3290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5208 | |HGNC=5208 | ||
|TSSclassifier=strong | |||
|UniProt=P28845 | |UniProt=P28845 | ||
|association_with_transcript=27bp_to_ENST00000367027,uc001hhk.2_5end | |||
|cluster_id=chr1:209878218..209878229,+ | |||
|coexpression_cluster_id=C3933 | |||
|description=CAGE_peak_3_at_HSD11B1_5end | |||
|id=chr1:209878218..209878229,+ | |||
|ontology_enrichment_celltype=CL:0000136!8.91e-12!15;CL:0000192!2.53e-09!42;CL:0000514!2.53e-09!42;CL:0000187!1.42e-08!54;CL:0000680!2.07e-08!57;CL:0000056!2.07e-08!57;CL:0000355!2.07e-08!57;CL:0000393!1.82e-07!60;CL:0000211!1.82e-07!60;CL:0000183!3.70e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.44e-21;13!CL:0002615;9.66e-09;3!CL:0000134;5.06e-08;55!CL:0002595;3.17e-07;5!CL:0000048;6.67e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.56e-18,15;CL:0000048,2.15e-09,427;CL:0000723,4.85e-09,433;CL:0002615,1.01e-08,3;CL:0000034,1.38e-08,441;CL:0002595,2.02e-07,5;CL:0000192,6.63e-07,43;CL:0000514,6.63e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.93e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.48e-22;14!DOID:120;4.96e-10;27!DOID:193;3.79e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.95e-22,14;DOID:120,4.67e-10,27;DOID:193,3.59e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.57e-17!115;UBERON:0000025!6.05e-11!194;UBERON:0001049!8.68e-10!57;UBERON:0005068!8.68e-10!57;UBERON:0006241!8.68e-10!57;UBERON:0007135!8.68e-10!57;UBERON:0004111!2.86e-09!241;UBERON:0002385!1.04e-08!63;UBERON:0001015!1.04e-08!63;UBERON:0000383!1.04e-08!63;UBERON:0004457!1.63e-08!12;UBERON:0000042!1.63e-08!12;UBERON:0002616!2.16e-08!59;UBERON:0001134!5.69e-08!61;UBERON:0002036!5.69e-08!61;UBERON:0003082!5.69e-08!61;UBERON:0000477!7.53e-08!286;UBERON:0000992!7.74e-08!13;UBERON:0001135!1.36e-07!15;UBERON:0000483!1.42e-07!309;UBERON:0003080!1.47e-07!42;UBERON:0003688!1.85e-07!6;UBERON:0002358!1.85e-07!6;UBERON:0003684!1.85e-07!6;UBERON:0001178!1.85e-07!6;UBERON:0000119!2.80e-07!312;UBERON:0002780!4.58e-07!41;UBERON:0001890!4.58e-07!41;UBERON:0006240!4.58e-07!41;UBERON:0004290!5.02e-07!70;UBERON:0001893!6.80e-07!34;UBERON:0004458!7.34e-07!49;UBERON:0001017!8.59e-07!82;UBERON:0000955!9.47e-07!69;UBERON:0006238!9.47e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;3.81e-13;13!UBERON:0004457;1.30e-12;9!UBERON:0000042;1.30e-12;9!UBERON:0002118;2.40e-11;5!UBERON:0003688;2.71e-10;6!UBERON:0002358;2.71e-10;6!UBERON:0003684;2.71e-10;6!UBERON:0001178;2.71e-10;6!UBERON:0000991;1.91e-07;21!UBERON:0003834;3.17e-07;5!UBERON:0001533;3.17e-07;5!UBERON:0004458;5.18e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.24e-13,13;UBERON:0004457,1.07e-11,12;UBERON:0000042,1.07e-11,12;UBERON:0002118,1.82e-11,5;UBERON:0003688,4.10e-10,6;UBERON:0002358,4.10e-10,6;UBERON:0003684,4.10e-10,6;UBERON:0001178,4.10e-10,6;UBERON:0004458,1.02e-09,49;UBERON:0002323,5.80e-08,46;UBERON:0000926,1.18e-07,315;UBERON:0004120,1.18e-07,315;UBERON:0006603,1.18e-07,315;UBERON:0000991,1.74e-07,21;UBERON:0009196,1.74e-07,21;UBERON:0009117,1.74e-07,21;UBERON:0005564,1.74e-07,21;UBERON:0003834,2.02e-07,5;UBERON:0001533,2.02e-07,5;UBERON:0003886,2.71e-07,54;UBERON:0004176,4.58e-07,22 | |||
|phase1_expression=2.18014055124668,1.49870366723688,11.6992155399656,5.00366491765652,14.3027550216732,0.872338524100369,0,8.84407822797563,8.35794010239483,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,1.02290049474824,0.361439152384566,1.50401373190767,0.869079113764942,0,0.973269740605272,0,0,0,0.261958150995425,0,0,9.7364218096405,9.0547463395619,14.3594597360374,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58891016975863,0.286836620748814,0,0,0,0,1.8672662123986,0.404132016209064,0.326923806226917,0,0,0,1.24864030732128,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,21.5483559197112,7.86261773342101,12.4065880403095,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,4.91408956792399,2.37809859661965,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,3.57444984145369,0,0,0,3.55391948742546,0.791951872933429,0.904318131178758,5.22920075160176,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,2.17836553734692,1.02341449813341,0.804269605718038,0,0.154209693802656,0.355123450626254,0.0821271560138091,2.07701771673448,0,0,0,0,2.29628896329214,0,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0135775840902,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,1.25924938732256,1.3940745403212,0.616067160352178,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0.255897791311334,0.855877976067841,2.86382923133343,0,0.359744915166629,3.56898138656871,2.70968525395079,0.202182481573316,0,0,0,1.94970791705028,0,0.272999822815972,4.3835683905651,1.13008116620243,1.65409603063837,3.3171948762061,1.31535265576129,0,1.31178950409327,0,0,0,0.143411352204052,0,0,0.354761064070598,2.9555068941673,3.29294892959902,0,0,0,0,0,10.4499618862225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71752672377882,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,3.05163472634166,0.663475559587348,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,10.5270382711533,0.0915975934018623,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0.581934098930517,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.684526894459965,0,0,0,0,0.458320848023367,0,0,0,0.669514372325618,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,0.326587360109409,0,0,0,0,19.491447079185,0,0.387848869084652,0,0,0,1.60181118851542,0.78602152549833,0,0.992332043623902,0,0,0,1.08803560673895,8.7741462907945,5.20787480497885,2.95085367638824,0,0.886068179966986,0.244052529803926,0.1251909307065,1.14681839138014,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,1.10961172300523,0.189403005275089,1.0062716070103,0,1.14420034198462,2.26846385644859,0.310874401165561,3.10495814978231,0.63718706865481,20.6909431595258,2.48420731002015,9.53824278033968,1.06336685823198,2.60872530905867,4.50772826991655,5.33127297036314,1.62748293281865,2.18218391043071,1.39633724155235,2.78420255927096,4.37905477568478,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0.742913430802341,0.781078098613847,0.206686796501184,0.443910671357348,0,0,0.496211178389294,0,0,0,0,0,0,8.33802279528805,0,0.171488009437418,0.679697329768317,0.394636641377094,0,0,1.02041020705668,0,0,0,0,0,0.500335809236594,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0.785233868459781,0.297046400327086,0,0,2.16163011353663,0.257831551894309,0,0,0,0,0,0,1.00337708206016,0,0.407948941145488,0,0,0.743990036333503,1.84870251452567,0,0,0,0,0,0,0,0,0.682008283964155,0.267964130156178,1.65833887891756,0.620597975171371,0,0,0,0,0,0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| ||
|short_description=p3@HSD11B1 | |||
}} | }} |
Latest revision as of 20:32, 24 September 2015
Short description: | p3@HSD11B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HSD11B1_5end |
Coexpression cluster: | C3933_Hepatocyte_liver_mesenchymal_Dendritic_Adipocyte_Cardiac_chorionic |
Association with transcript: | 27bp_to_ENST00000367027, uc001hhk.2_5end |
EntrezGene: | HSD11B1 |
HGNC: | 5208 |
UniProt: | P28845 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.56e-18 | 15 |
multi fate stem cell | 2.15e-09 | 427 |
somatic stem cell | 4.85e-09 | 433 |
adipocyte of omentum tissue | 1.01e-08 | 3 |
stem cell | 1.38e-08 | 441 |
smooth muscle cell of the subclavian artery | 2.02e-07 | 5 |
smooth muscle cell | 6.63e-07 | 43 |
smooth muscle myoblast | 6.63e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.24e-13 | 13 |
cavity lining | 1.07e-11 | 12 |
serous membrane | 1.07e-11 | 12 |
right ovary | 1.82e-11 | 5 |
omentum | 4.10e-10 | 6 |
peritoneum | 4.10e-10 | 6 |
abdominal cavity | 4.10e-10 | 6 |
visceral peritoneum | 4.10e-10 | 6 |
body cavity or lining | 1.02e-09 | 49 |
body cavity | 5.80e-08 | 46 |
mesoderm | 1.18e-07 | 315 |
mesoderm-derived structure | 1.18e-07 | 315 |
presumptive mesoderm | 1.18e-07 | 315 |
gonad | 1.74e-07 | 21 |
indifferent external genitalia | 1.74e-07 | 21 |
indifferent gonad | 1.74e-07 | 21 |
gonad primordium | 1.74e-07 | 21 |
thoracic segment blood vessel | 2.02e-07 | 5 |
subclavian artery | 2.02e-07 | 5 |
body cavity precursor | 2.71e-07 | 54 |
external genitalia | 4.58e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.95e-22 | 14 |
female reproductive organ cancer | 4.67e-10 | 27 |
reproductive organ cancer | 3.59e-09 | 29 |