FFCP PHASE1:Hg19::chr4:119274086..119274113,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8492 | |EntrezGene=8492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9477 | |HGNC=9477 | ||
|TSSclassifier=strong | |||
|UniProt=P56730 | |UniProt=P56730 | ||
|association_with_transcript=44bp_to_ENST00000296498_5end | |association_with_transcript=44bp_to_ENST00000296498_5end | ||
|cluster_id=chr4:119274086..119274113,- | |||
|coexpression_cluster_id=C4364 | |||
|description=CAGE_peak_4_at_PRSS12_5end | |description=CAGE_peak_4_at_PRSS12_5end | ||
|id=chr4:119274086..119274113,- | |id=chr4:119274086..119274113,- | ||
|ontology_enrichment_celltype=CL:0000055!1.48e-22!180;CL:0000057!6.59e-18!75;CL:0000192!5.76e-11!42;CL:0000514!5.76e-11!42;CL:0002321!6.08e-11!248;CL:0000220!8.97e-11!246;CL:0002620!1.08e-10!23;CL:0000393!1.52e-10!60;CL:0000211!1.52e-10!60;CL:0000187!3.12e-10!54;CL:0000680!3.87e-10!57;CL:0000056!3.87e-10!57;CL:0000355!3.87e-10!57;CL:0000183!2.62e-09!59;CL:0000359!8.69e-08!32 | |ontology_enrichment_celltype=CL:0000055!1.48e-22!180;CL:0000057!6.59e-18!75;CL:0000192!5.76e-11!42;CL:0000514!5.76e-11!42;CL:0002321!6.08e-11!248;CL:0000220!8.97e-11!246;CL:0002620!1.08e-10!23;CL:0000393!1.52e-10!60;CL:0000211!1.52e-10!60;CL:0000187!3.12e-10!54;CL:0000680!3.87e-10!57;CL:0000056!3.87e-10!57;CL:0000355!3.87e-10!57;CL:0000183!2.62e-09!59;CL:0000359!8.69e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.20e-12;23!CL:0000192;9.12e-11;43!CL:0000057;1.28e-09;73!CL:0000359;1.22e-08;32!CL:0002556;4.99e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.12e-21,76;CL:0000192,5.57e-15,43;CL:0000514,5.57e-15,43;CL:0002620,5.20e-12,23;CL:0000187,6.10e-11,55;CL:0000680,1.56e-10,58;CL:0000056,1.56e-10,58;CL:0000355,1.56e-10,58;CL:0000393,3.59e-10,61;CL:0000211,3.59e-10,61;CL:0000359,2.11e-09,32;CL:0002321,2.87e-08,250;CL:0002556,3.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;9.12e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.18e-19!95;UBERON:0000475!3.80e-19!365;UBERON:0000914!2.03e-14!83;UBERON:0002329!2.03e-14!83;UBERON:0003077!2.03e-14!83;UBERON:0003059!2.03e-14!83;UBERON:0007282!2.03e-14!83;UBERON:0009618!2.03e-14!83;UBERON:0007285!2.03e-14!83;UBERON:0001444!3.56e-13!48;UBERON:0000486!1.21e-11!82;UBERON:0000481!1.78e-11!347;UBERON:0002097!5.20e-11!40;UBERON:0004290!9.39e-11!70;UBERON:0000468!2.74e-10!659;UBERON:0002100!1.39e-09!216;UBERON:0002199!1.52e-09!45;UBERON:0002416!1.52e-09!45;UBERON:0005256!5.13e-09!143;UBERON:0001134!2.37e-08!61;UBERON:0002036!2.37e-08!61;UBERON:0003082!2.37e-08!61;UBERON:0002385!3.20e-08!63;UBERON:0001015!3.20e-08!63;UBERON:0000383!3.20e-08!63;UBERON:0000165!3.38e-08!28;UBERON:0000930!3.38e-08!28;UBERON:0000467!3.70e-08!625;UBERON:0000480!5.25e-08!626;UBERON:0004119!9.48e-08!169;UBERON:0000925!9.48e-08!169;UBERON:0006595!9.48e-08!169;UBERON:0005085!1.16e-07!29;UBERON:0003104!1.46e-07!238;UBERON:0009142!1.46e-07!238;UBERON:0000161!6.42e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.59e-09;41!UBERON:0001444;3.66e-09;48!UBERON:0000165;4.55e-09;28!UBERON:0000033;8.00e-09;50!UBERON:0003102;1.01e-08;50!UBERON:0007811;1.84e-08;52!UBERON:0001828;2.50e-08;8!UBERON:0002199;8.64e-08;46!UBERON:0002416;8.64e-08;46!UBERON:0000153;4.80e-07;54!UBERON:0001758;4.99e-07;6!UBERON:0003672;4.99e-07;6!UBERON:0011137;7.64e-07;11!UBERON:0010323;7.64e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.54e-21,99;UBERON:0001444,2.61e-13,49;UBERON:0002097,7.55e-13,41;UBERON:0007524,1.83e-12,73;UBERON:0002329,3.97e-12,71;UBERON:0003059,3.97e-12,71;UBERON:0007282,3.97e-12,71;UBERON:0004290,3.97e-12,71;UBERON:0009618,3.97e-12,71;UBERON:0000486,6.12e-12,83;UBERON:0000033,6.90e-12,56;UBERON:0003077,8.87e-12,72;UBERON:0007285,8.87e-12,72;UBERON:0002199,3.84e-11,46;UBERON:0002416,3.84e-11,46;UBERON:0000165,4.50e-10,29;UBERON:0000930,4.50e-10,29;UBERON:0007503,6.68e-10,78;UBERON:0000153,1.11e-09,62;UBERON:0007811,1.11e-09,62;UBERON:0002385,3.14e-09,64;UBERON:0001015,3.14e-09,64;UBERON:0000383,3.14e-09,64;UBERON:0001134,3.52e-09,62;UBERON:0002036,3.52e-09,62;UBERON:0003082,3.52e-09,62;UBERON:0005085,1.56e-08,31;UBERON:0001828,1.65e-08,8;UBERON:0001637,1.34e-07,42;UBERON:0003509,1.34e-07,42;UBERON:0004572,1.34e-07,42;UBERON:0004573,1.93e-07,33;UBERON:0004571,1.93e-07,33;UBERON:0001758,3.80e-07,6;UBERON:0003672,3.80e-07,6;UBERON:0010323,7.18e-07,11 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,1.0007329835313,0,2.61701557230111,0,0,0,0.982935746006035,0.697801167972428,0,0,0.990130823680373,2.31978163009541,2.01697543935533,1.80808358407193,0,1.95173119516203,1.35433163884467,4.69201589861782,0.940364164434263,0,0,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0,0,0,3.67768489791571,0.6024118375565,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.614843499851882,0.982343066232845,1.09288586487763,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,2.41697590265488,3.04108842287405,1.22031028774085,2.94130464276695,0,0,0,0,0,0,0,0,0,2.18047026071267,6.95760732373446,6.83804762988731,1.45650098894541,6.3104056564739,6.02936249737207,0,0,0,0,0.134710672069688,0.326923806226917,0.454072282934794,1.72852777344,6.32667865951251,0.624320153660641,3.4228309292667,1.19558944441441,3.75790395660048,6.96053660782966,5.89893388149444,6.32877930890169,4.91337269247072,4.44300859055791,16.6320400019487,10.8797448882565,0,0.718618141816238,5.38675564653012,3.87867411603089,5.54128230968366,5.26773145057006,4.90380473278431,4.6573798261045,0.113432183160021,3.40840307808838,3.20336083227851,1.05965950579781,4.50136644126603,6.38925681278321,1.8034837803194,4.09457083929498,1.18143432568886,0.876933046450788,2.52433774244115,4.32634523618807,6.30419621593366,2.13005755509969,1.5112814734146,1.69560592310488,1.73934767846967,2.45471508531751,4.87567812161307,0.487894824518382,0.530119073285941,0.348581828608555,0.310983165046111,0.504641701751257,0.36497735907583,3.12899064659632,2.57296375277154,0,2.3218396401599,2.88751792667834,0.118306800039844,0,0,0,0,0,0,0.588664395376038,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,1.54411029268673,0.98775256867763,3.37205259772859,0.703702806881416,1.85176890317059,2.93227474779292,3.11980435583874,2.88662684050547,1.04337364477569,4.22671299248958,2.16549671641611,1.38895653772983,1.33177906564219,0,0,0,0,0,0,2.35174979478403,1.27597587518148,2.50763863567975,1.74380363108377,3.06706143332169,0,0,2.28060927094849,5.04419836959365,1.2624243342638,0.063497894292169,0.381988425558278,0,0,0.514137463516618,0,0,0.112131084345361,0.87192013766656,0.07333828582095,13.96134530184,0,0.845302752556,5.31876233169741,3.12022310734098,0.771622122786426,1.41849132023278,1.3321108950805,0.57191197463259,0.542621605391443,3.29296134712308,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0,0,0,0,1.67737398844108,1.14861935834114,1.42636905040718,1.44781306667579,0.821905290201534,0,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0.981531933753119,0,1.62759014219841,4.99130067673937,5.88815663030634,8.2005255817646,7.84847480451178,1.50473049863859,0,0,2.65690239414175,2.94990669666725,7.38510722978704,0.195801157462741,1.02943027143257,0,0,0,0,0,0.30239029332968,5.45837177201309,1.07423381301644,2.52594084989766,1.28139149255701,3.58195074346692,3.69964018630297,2.96836132889982,0.771048469013278,1.06537035187876,0.98552587216571,2.59627214591811,1.74315567689939,0,0.802025881213139,1.38121483403844,1.03333003348146,2.91345868810747,3.54035920390445,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0.656029291399411,2.27764876265012,0.309123034943167,0,0,3.44559322797703,1.95018073810956,0,1.83674364755032,0.462145851343933,0.767518373630648,0.964856007391714,0.107420244868274,0.580066775656914,0.852266274161009,0.445160178233687,0.826424576804891,1.72971060628596,2.29702882490251,4.4509423576442,2.32422774648643,5.98143458978216,6.2733354314454,0,1.59691809095107,5.21959795245044,4.44778125849408,0.572499546967965,0,1.58189712359363,0.762520775695299,3.58256907835867,5.13526785640705,0.318203247925937,0.78494864019923,3.95719406683292,2.19629623788844,1.29593642580255,1.01091240786658,1.58510321173008,0,1.46290121726877,1.70599442741899,3.16950440270266,4.50449707646353,3.95935209470396,0,1.65409603063837,4.64407282668854,3.94605796728386,2.89387767133344,4.59126326432643,3.65238678532867,2.78841148289775,3.09865162785466,2.00775893085672,3.92996164052485,2.49669736036875,0,0,0.329294892959902,3.41525856389144,6.99869440489966,1.34710957815717,2.01090682660736,0,0.470719003883896,1.29151611801369,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,5.96184732766457,0,4.60861146462687,8.05233988412697,8.00875880217161,0,0,0,0,0,0,3.18138918693974,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,1.11308705022906,0,0,0,0.552567831062295,1.76352923497993,23.3172596104913,0,4.0435146396035,0.808815160325942,0.358042349351218,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,3.41380344856499,1.0170146011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| ||
|short_description=p4@PRSS12 | |short_description=p4@PRSS12 | ||
}} | }} |
Latest revision as of 21:09, 24 September 2015
Short description: | p4@PRSS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRSS12_5end |
Coexpression cluster: | C4364_astrocytoma_Fibroblast_Smooth_Olfactory_sacrococcigeal_normal_Mesenchymal |
Association with transcript: | 44bp_to_ENST00000296498_5end |
EntrezGene: | PRSS12 |
HGNC: | 9477 |
UniProt: | P56730 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.12e-21 | 76 |
smooth muscle cell | 5.57e-15 | 43 |
smooth muscle myoblast | 5.57e-15 | 43 |
skin fibroblast | 5.20e-12 | 23 |
muscle cell | 6.10e-11 | 55 |
muscle precursor cell | 1.56e-10 | 58 |
myoblast | 1.56e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-10 | 58 |
electrically responsive cell | 3.59e-10 | 61 |
electrically active cell | 3.59e-10 | 61 |
vascular associated smooth muscle cell | 2.11e-09 | 32 |
embryonic cell | 2.87e-08 | 250 |
fibroblast of periodontium | 3.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.54e-21 | 99 |
subdivision of head | 2.61e-13 | 49 |
skin of body | 7.55e-13 | 41 |
dense mesenchyme tissue | 1.83e-12 | 73 |
somite | 3.97e-12 | 71 |
presomitic mesoderm | 3.97e-12 | 71 |
presumptive segmental plate | 3.97e-12 | 71 |
dermomyotome | 3.97e-12 | 71 |
trunk paraxial mesoderm | 3.97e-12 | 71 |
multilaminar epithelium | 6.12e-12 | 83 |
head | 6.90e-12 | 56 |
paraxial mesoderm | 8.87e-12 | 72 |
presumptive paraxial mesoderm | 8.87e-12 | 72 |
integument | 3.84e-11 | 46 |
integumental system | 3.84e-11 | 46 |
mouth | 4.50e-10 | 29 |
stomodeum | 4.50e-10 | 29 |
epithelial vesicle | 6.68e-10 | 78 |
anterior region of body | 1.11e-09 | 62 |
craniocervical region | 1.11e-09 | 62 |
muscle tissue | 3.14e-09 | 64 |
musculature | 3.14e-09 | 64 |
musculature of body | 3.14e-09 | 64 |
skeletal muscle tissue | 3.52e-09 | 62 |
striated muscle tissue | 3.52e-09 | 62 |
myotome | 3.52e-09 | 62 |
ectodermal placode | 1.56e-08 | 31 |
gingiva | 1.65e-08 | 8 |
artery | 1.34e-07 | 42 |
arterial blood vessel | 1.34e-07 | 42 |
arterial system | 1.34e-07 | 42 |
systemic artery | 1.93e-07 | 33 |
systemic arterial system | 1.93e-07 | 33 |
periodontium | 3.80e-07 | 6 |
dentition | 3.80e-07 | 6 |
cranial skeletal system | 7.18e-07 | 11 |