FFCP PHASE1:Hg19::chr11:105480996..105481007,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2893 | |EntrezGene=2893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4574 | |HGNC=4574 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJZ5 | |UniProt=E9PJZ5 | ||
|association_with_transcript=3bp_to_ENST00000525921_5end | |association_with_transcript=3bp_to_ENST00000525921_5end | ||
|cluster_id=chr11:105480996..105481007,+ | |||
|coexpression_cluster_id=C3078 | |||
|description=CAGE_peak_13_at_GRIA4_5end | |description=CAGE_peak_13_at_GRIA4_5end | ||
|id=chr11:105480996..105481007,+ | |id=chr11:105480996..105481007,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000138;7.37e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.17e-07,6;CL:0000138,7.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.74e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;2.18e-34;1!DOID:4549;2.18e-34;1!DOID:5861;2.18e-34;1!DOID:6496;2.18e-34;1!DOID:201;7.37e-07;6!DOID:0060100;7.37e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.84e-34,1;DOID:4549,1.84e-34,1;DOID:5861,1.84e-34,1;DOID:6496,1.84e-34,1;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000200;8.16e-50;6!UBERON:0002022;5.97e-34;1!UBERON:0007190;5.97e-34;1!UBERON:0002702;5.96e-18;2!UBERON:0002771;9.86e-18;2!UBERON:0001950;6.69e-15;20!UBERON:0001869;1.29e-14;32!UBERON:0002619;1.12e-13;22!UBERON:0001893;4.07e-13;34!UBERON:0001870;1.96e-12;3!UBERON:0002418;1.96e-12;3!UBERON:0004755;1.96e-12;3!UBERON:0000956;3.44e-12;25!UBERON:0000203;3.44e-12;25!UBERON:0000073;9.75e-12;53!UBERON:0002616;9.75e-12;53!UBERON:0000955;1.44e-09;68!UBERON:0002791;4.46e-09;32!UBERON:0003528;1.51e-08;34!UBERON:0002020;1.51e-08;34!UBERON:0001016;1.45e-07;83!UBERON:0001017;2.26e-07;75!UBERON:0002780;7.59e-07;41!UBERON:0001890;7.59e-07;41!UBERON:0002037;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,8.88e-50,6;UBERON:0007190,7.06e-34,1;UBERON:0002022,9.85e-34,1;UBERON:0002702,6.48e-18,2;UBERON:0002771,9.07e-18,2;UBERON:0001869,1.64e-16,32;UBERON:0000073,1.06e-15,53;UBERON:0002616,1.06e-15,53;UBERON:0001893,1.32e-15,34;UBERON:0001049,6.69e-15,56;UBERON:0005068,6.69e-15,56;UBERON:0006241,6.69e-15,56;UBERON:0007135,6.69e-15,56;UBERON:0001950,7.18e-15,20;UBERON:0002619,1.20e-13,22;UBERON:0002780,4.14e-13,41;UBERON:0001890,4.14e-13,41;UBERON:0003080,4.14e-13,41;UBERON:0006240,4.14e-13,41;UBERON:0002418,1.85e-12,3;UBERON:0004755,1.85e-12,3;UBERON:0001870,2.07e-12,3;UBERON:0000955,3.17e-12,68;UBERON:0006238,3.17e-12,68;UBERON:0000956,3.64e-12,25;UBERON:0000203,3.64e-12,25;UBERON:0001017,2.22e-10,81;UBERON:0003075,2.22e-10,82;UBERON:0007284,2.22e-10,82;UBERON:0002346,6.36e-10,86;UBERON:0002791,9.60e-10,32;UBERON:0001016,2.09e-09,89;UBERON:0003528,3.15e-09,34;UBERON:0002020,3.15e-09,34;UBERON:0003056,4.62e-09,61;UBERON:0010371,2.74e-08,104;UBERON:0007023,1.16e-07,114;UBERON:0002037,8.02e-07,6;UBERON:0006215,8.02e-07,6 | |||
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|short_description=p13@GRIA4 | |short_description=p13@GRIA4 | ||
}} | }} |
Latest revision as of 21:16, 24 September 2015
Short description: | p13@GRIA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GRIA4_5end |
Coexpression cluster: | C3078_pineal_extraskeletal_occipital_medial_cerebellum_amygdala_parietal |
Association with transcript: | 3bp_to_ENST00000525921_5end |
EntrezGene: | GRIA4 |
HGNC: | 4574 |
UniProt: | E9PJZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.17e-07 | 6 |
chondrocyte | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.84e-34 | 1 |
extraosseous chondrosarcoma | 1.84e-34 | 1 |
myxoid chondrosarcoma | 1.84e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 1.84e-34 | 1 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |