FFCP PHASE1:Hg19::chr22:41956840..41956852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27254 | |EntrezGene=27254 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30359 | |HGNC=30359 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y534 | |UniProt=Q9Y534 | ||
|association_with_transcript=73bp_to_ENST00000306149_5end | |association_with_transcript=73bp_to_ENST00000306149_5end | ||
|cluster_id=chr22:41956840..41956852,+ | |||
|description=CAGE_peak_5_at_CSDC2_5end | |description=CAGE_peak_5_at_CSDC2_5end | ||
|id=chr22:41956840..41956852,+ | |id=chr22:41956840..41956852,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000650;1.29e-15;2!CL:1000500;1.29e-15;2!CL:1000618;1.29e-15;2!CL:1001318;1.29e-15;2!CL:0002173;1.29e-15;2!CL:0000669;3.00e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.66e-16,2;CL:1000500,8.66e-16,2;CL:1000618,8.66e-16,2;CL:1001318,8.66e-16,2;CL:0002173,8.66e-16,2;CL:0000669,2.47e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.12e-08;1!UBERON:0010226;2.12e-08;1!UBERON:0005062;2.21e-08;4!UBERON:0007284;2.21e-08;4!UBERON:0009117;5.31e-07;10!UBERON:0005564;5.31e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.60e-16;2!DOID:178;8.44e-09;1!DOID:326;8.44e-09;1!DOID:3978;8.44e-09;1!DOID:3394;8.44e-09;1!DOID:5844;8.44e-09;1!DOID:1287;1.81e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.13e-16,2;DOID:178,7.56e-09,1;DOID:326,7.56e-09,1;DOID:3978,7.56e-09,1;DOID:3394,7.56e-09,1;DOID:5844,7.56e-09,1;DOID:1287,1.71e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-16!115;UBERON:0003075!1.47e-13!86;UBERON:0007284!1.47e-13!86;UBERON:0002346!1.72e-12!90;UBERON:0005743!5.65e-11!86;UBERON:0000955!4.80e-10!69;UBERON:0006238!4.80e-10!69;UBERON:0000073!7.76e-10!94;UBERON:0001016!7.76e-10!94;UBERON:0000062!1.92e-09!511;UBERON:0001049!4.99e-09!57;UBERON:0005068!4.99e-09!57;UBERON:0006241!4.99e-09!57;UBERON:0007135!4.99e-09!57;UBERON:0001017!1.15e-08!82;UBERON:0002616!1.73e-08!59;UBERON:0003056!4.34e-08!61;UBERON:0003135!6.32e-08!11;UBERON:0000033!2.23e-07!123;UBERON:0007625!3.35e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;1.29e-15;2!UBERON:0003838;1.29e-15;2!UBERON:0003586;1.29e-15;2!UBERON:0005169;1.29e-15;2!UBERON:0002321;1.29e-15;2!UBERON:0005215;1.29e-15;2!UBERON:0002303;1.29e-15;2!UBERON:0002319;1.29e-15;2!UBERON:0007100;1.76e-13;25!UBERON:0003978;6.78e-11;3!UBERON:0000946;6.78e-11;3!UBERON:0004151;2.26e-10;3!UBERON:0006834;6.25e-09;1!UBERON:0002135;8.44e-09;1!UBERON:0002146;8.44e-09;1!UBERON:0005623;8.44e-09;1!UBERON:0002084;2.12e-08;1!UBERON:0002079;2.12e-08;1!UBERON:0001389;2.12e-08;1!UBERON:0000026;2.12e-08;1!UBERON:0008784;2.12e-08;1!UBERON:0006058;2.12e-08;1!UBERON:0003663;2.12e-08;1!UBERON:0004256;2.12e-08;1!UBERON:0002082;2.12e-08;1!UBERON:0004708;2.12e-08;1!UBERON:0002101;2.12e-08;1!UBERON:0004709;2.12e-08;1!UBERON:0002529;2.12e-08;1!UBERON:0010538;2.12e-08;1!UBERON:0003661;2.12e-08;1!UBERON:0010890;2.12e-08;1!UBERON:0002471;2.12e-08;1!UBERON:0001383;2.12e-08;1!UBERON:0010758;2.12e-08;1!UBERON:0010707;2.12e-08;1!UBERON:0000978;2.12e-08;1!UBERON:0002103;2.12e-08;1!UBERON:0001665;2.12e-08;1!UBERON:0003823;2.12e-08;1!UBERON:0000154;2.12e-08;1!UBERON:0010709;2.12e-08;1!UBERON:0003891;3.00e-08;4!UBERON:0002784;5.42e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.05e-17,114;UBERON:0003567,8.66e-16,2;UBERON:0003838,8.66e-16,2;UBERON:0003586,8.66e-16,2;UBERON:0005169,8.66e-16,2;UBERON:0002321,8.66e-16,2;UBERON:0005215,8.66e-16,2;UBERON:0002303,8.66e-16,2;UBERON:0002319,8.66e-16,2;UBERON:0007100,1.62e-12,27;UBERON:0003978,6.79e-11,3;UBERON:0009751,6.79e-11,3;UBERON:0000946,6.79e-11,3;UBERON:0002523,6.79e-11,3;UBERON:0005983,6.79e-11,3;UBERON:0002165,6.79e-11,3;UBERON:0002062,6.79e-11,3;UBERON:0007280,6.79e-11,3;UBERON:0004151,1.16e-10,3;UBERON:0006834,6.03e-09,1;UBERON:0002135,8.15e-09,1;UBERON:0002146,8.78e-09,1;UBERON:0005623,8.78e-09,1;UBERON:0002084,1.10e-08,1;UBERON:0002082,1.10e-08,1;UBERON:0010226,1.10e-08,1;UBERON:0002079,1.48e-08,1;UBERON:0005418,2.13e-08,1;UBERON:0001389,2.13e-08,1;UBERON:0000026,2.13e-08,1;UBERON:0008784,2.13e-08,1;UBERON:0006058,2.13e-08,1;UBERON:0003663,2.13e-08,1;UBERON:0004256,2.13e-08,1;UBERON:0004708,2.13e-08,1;UBERON:0002101,2.13e-08,1;UBERON:0004709,2.13e-08,1;UBERON:0002529,2.13e-08,1;UBERON:0010538,2.13e-08,1;UBERON:0003661,2.13e-08,1;UBERON:0010890,2.13e-08,1;UBERON:0002471,2.13e-08,1;UBERON:0001383,2.13e-08,1;UBERON:0004357,2.13e-08,1;UBERON:0004347,2.13e-08,1;UBERON:0005420,2.13e-08,1;UBERON:0005732,2.13e-08,1;UBERON:0010758,2.13e-08,1;UBERON:0010707,2.13e-08,1;UBERON:0000978,2.13e-08,1;UBERON:0002103,2.13e-08,1;UBERON:0001665,2.13e-08,1;UBERON:0003823,2.13e-08,1;UBERON:0000154,2.13e-08,1;UBERON:0010709,2.13e-08,1;UBERON:0005733,2.13e-08,1;UBERON:0005730,2.13e-08,1;UBERON:0003891,2.47e-08,4;UBERON:0002784,4.88e-08,4;UBERON:0003103,2.44e-07,68 | |||
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|short_description=p5@CSDC2 | |short_description=p5@CSDC2 | ||
}} | }} |
Latest revision as of 21:50, 24 September 2015
Short description: | p5@CSDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CSDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_ENST00000306149_5end |
EntrezGene: | CSDC2 |
HGNC: | 30359 |
UniProt: | Q9Y534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.66e-16 | 2 |
kidney interstitial cell | 8.66e-16 | 2 |
juxtaglomerular complex cell | 8.66e-16 | 2 |
renal interstitial pericyte | 8.66e-16 | 2 |
extraglomerular mesangial cell | 8.66e-16 | 2 |
pericyte cell | 2.47e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.13e-16 | 2 |
vascular disease | 7.56e-09 | 1 |
ischemia | 7.56e-09 | 1 |
extrinsic cardiomyopathy | 7.56e-09 | 1 |
myocardial ischemia | 7.56e-09 | 1 |
myocardial infarction | 7.56e-09 | 1 |
cardiovascular system disease | 1.71e-08 | 4 |