FFCP PHASE1:Hg19::chr2:220417052..220417077,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23363 | |EntrezGene=23363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29092 | |HGNC=29092 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000462534_5end | |association_with_transcript=33bp_to_ENST00000462534_5end | ||
|cluster_id=chr2:220417052..220417077,- | |||
|description=CAGE_peak_6_at_OBSL1_5end | |description=CAGE_peak_6_at_OBSL1_5end | ||
|id=chr2:220417052..220417077,- | |id=chr2:220417052..220417077,- | ||
|ontology_enrichment_celltype=CL:0000055!7.42e-07!180 | |ontology_enrichment_celltype=CL:0000055!7.42e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000077;7.85e-10;19!CL:0002322;2.55e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.09e-09,19;CL:0002322,1.92e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.19e-18!86;UBERON:0003075!1.44e-17!86;UBERON:0007284!1.44e-17!86;UBERON:0000073!7.44e-17!94;UBERON:0001016!7.44e-17!94;UBERON:0001017!9.54e-17!82;UBERON:0002346!1.30e-16!90;UBERON:0003056!6.29e-16!61;UBERON:0001049!3.95e-15!57;UBERON:0005068!3.95e-15!57;UBERON:0006241!3.95e-15!57;UBERON:0007135!3.95e-15!57;UBERON:0000955!3.45e-14!69;UBERON:0006238!3.45e-14!69;UBERON:0000033!1.39e-13!123;UBERON:0002616!2.93e-13!59;UBERON:0002780!6.73e-13!41;UBERON:0001890!6.73e-13!41;UBERON:0006240!6.73e-13!41;UBERON:0004121!1.07e-12!169;UBERON:0000924!2.74e-12!173;UBERON:0006601!2.74e-12!173;UBERON:0003080!3.19e-12!42;UBERON:0000153!7.11e-12!129;UBERON:0007811!7.11e-12!129;UBERON:0002020!8.63e-11!34;UBERON:0003528!8.63e-11!34;UBERON:0001893!1.71e-10!34;UBERON:0000475!2.41e-10!365;UBERON:0002791!3.91e-10!33;UBERON:0001869!1.29e-09!32;UBERON:0000956!2.70e-09!25;UBERON:0000203!2.70e-09!25;UBERON:0000119!4.51e-09!312;UBERON:0000483!1.27e-08!309;UBERON:0002619!1.23e-07!22;UBERON:0000481!4.26e-07!347;UBERON:0000064!4.64e-07!219;UBERON:0003133!4.75e-07!48;UBERON:0005156!7.51e-07!59;UBERON:0000990!7.51e-07!59;UBERON:0001950!9.77e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;9.54e-11;25!UBERON:0000203;9.54e-11;25!UBERON:0003528;1.95e-08;34!UBERON:0002020;1.95e-08;34!UBERON:0001893;3.23e-08;34!UBERON:0002791;5.23e-08;32!UBERON:0002619;7.18e-08;22!UBERON:0000073;9.27e-08;53!UBERON:0002616;9.27e-08;53!UBERON:0001869;4.00e-07;32!UBERON:0002780;4.71e-07;41!UBERON:0001890;4.71e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.73e-13,81;UBERON:0001049,7.49e-12,56;UBERON:0005068,7.49e-12,56;UBERON:0006241,7.49e-12,56;UBERON:0007135,7.49e-12,56;UBERON:0000073,9.41e-12,53;UBERON:0002616,9.41e-12,53;UBERON:0003075,1.88e-11,82;UBERON:0007284,1.88e-11,82;UBERON:0001016,3.36e-11,89;UBERON:0000955,6.72e-11,68;UBERON:0006238,6.72e-11,68;UBERON:0000956,6.80e-11,25;UBERON:0000203,6.80e-11,25;UBERON:0003528,1.40e-10,34;UBERON:0002020,1.40e-10,34;UBERON:0002346,1.66e-10,86;UBERON:0003056,2.55e-09,61;UBERON:0001893,4.08e-09,34;UBERON:0002780,5.32e-09,41;UBERON:0001890,5.32e-09,41;UBERON:0003080,5.32e-09,41;UBERON:0006240,5.32e-09,41;UBERON:0002791,9.07e-09,32;UBERON:0002619,5.88e-08,22;UBERON:0010371,7.21e-08,104;UBERON:0010314,9.00e-08,132;UBERON:0001869,1.04e-07,32 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0,0,1.31064823278103,1.84636884759917,0.247532705920093,0,0.672325146451775,0,0,0.487932798790507,1.60057375499824,0.612002073732759,0,2.0036519099174,2.6006140763848,1.63205431473244,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.68511379871414,0.361439152384566,0.50133791063589,0.144846518960824,0,0.973269740605272,0.850813354476611,0.886917589850256,0.351339142772504,1.83370705696798,1.82147644146271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,1.55605517699883,0,0,0.756787138224657,0,0,0.312160076830321,0,0,0.352303495931295,0.323745888736263,0.561803226808994,0.204154171254893,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.625592599359821,0,0,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0.506328996723799,0.194874010322397,1.00973509697646,0.552299391853796,1.61646056818812,0.710019185033229,0.403008392910561,1.18692414617341,0.193260853163297,0.272746120590835,0,3.29329006549908,2.38553582978673,3.95059405756363,3.73179798055334,4.54177531576131,3.6497735907583,0,0,0,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0,0,0,0.269662616320329,0,0,0,0,1.2347220339942,0,0,0,0,0,0.122988438543114,0.857839051492628,0.439001141634502,0,0.402115889646523,0.555530670951178,0.325808305310325,1.03993478527958,0,1.04337364477569,0.587043471179108,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.895585227028483,1.45316969256981,0.383382679165211,0,0,0,0.288239906833923,0,0.698476837213859,0,1.17217447210047,0,0.308482478109971,0.300343057843917,1.14330573052231,0.448524337381443,0.87192013766656,0.51336800074665,0.129271715757778,0,0,0.797814349754612,0,0.514414748524284,2.83698264046557,0.532844358032199,0.857867961948885,0.542621605391443,1.64648067356154,0.325736184293735,0.710783897485092,0.791951872933429,2.41151501647669,6.10073421020206,0.799783929456456,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0.76228387266739,0,0,1.00509759200609,0,0,0,0,0.36807447515742,0,0.271265023699736,0.831883446123229,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,1.32845119707087,0.737476674166813,1.12948698808508,0.783204629850962,0.686286847621712,0,0,0,1.21251028578504,1.66435439510497,3.62868351995616,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0.393373244878272,0.902399225814824,0.462092022626489,0.784349769176855,4.38417673959782,0.633309773357254,0,0.170093705276516,0,1.54227252690289,0.541892875087706,0,0.764628819135115,0,0.895499018888713,0,0,3.07740150139667,3.60816110269676,0.976135183992909,0.721287081534056,2.19766715564024,2.14524699793529,0,0,0,0.193341436584244,0.462145851343933,0.767518373630648,0.551346289938122,0.214840489736547,1.0151168573996,0.0852266274161009,0.178064071293475,0.165284915360978,0.576570202095319,0.893288987462089,0.10115778085555,3.253918845081,2.20368642781448,1.3940745403212,0,0,0,0.37064843820784,0,0,0.316379424718726,0.571890581771475,0.255897791311334,0.855877976067841,1.27281299170375,0,0.899362287916574,0.274537029736055,0.235624804691373,0.404364963146632,0,0.421258456238981,2.43816869544795,0,1.05650146756755,0.272999822815972,0,1.13008116620243,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,1.00387946542836,0.589494246078727,1.07001315444375,3.19284957663538,0.211107635297664,0,0,0.699869440489966,0.288666338176536,0,4.3556393944529,0.376575203107117,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,1.81600920916704,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0.568272293612826,0,0.296964680832639,0,1.9882952955326,1.40669416410513,0.445234820091624,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.394573622547734,0,0,1.93866549219044,1.39152147242777,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0,1.04174996959975,0,0.844175070377856,0,0.552896299656123,0.295547618953547,1.53569778007781,0.544692317594951,0,0.461701551022782,0,0,0.359030577639089,0.108647371922008,0.638002319463839,0.183195186803725,0,0,0,0,0.225595660617181,0.980312671588698,0.335643173951685,0.37950746544837,0,0.210998064528027,0.163232808159148,0,0,0,0.176915129006678,0,2.37216902944498,2.22415090103705,1.25306339406546,1.28062152663286,0,0.702793337176017,0,0,0,0.789168805698781,0,0.30607276163049,0.31593289814244,0.751617097072463,0.207376382794494,0.664653872707185,0.661983911750998,0.627865836814451,0,0,0,0.173559738335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| ||
|short_description=p6@OBSL1 | |short_description=p6@OBSL1 | ||
}} | }} |
Latest revision as of 21:52, 24 September 2015
Short description: | p6@OBSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_OBSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000462534_5end |
EntrezGene: | OBSL1 |
HGNC: | 29092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.09e-09 | 19 |
embryonic stem cell | 1.92e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.73e-13 | 81 |
neural tube | 7.49e-12 | 56 |
neural rod | 7.49e-12 | 56 |
future spinal cord | 7.49e-12 | 56 |
neural keel | 7.49e-12 | 56 |
regional part of nervous system | 9.41e-12 | 53 |
regional part of brain | 9.41e-12 | 53 |
neural plate | 1.88e-11 | 82 |
presumptive neural plate | 1.88e-11 | 82 |
nervous system | 3.36e-11 | 89 |
brain | 6.72e-11 | 68 |
future brain | 6.72e-11 | 68 |
cerebral cortex | 6.80e-11 | 25 |
pallium | 6.80e-11 | 25 |
brain grey matter | 1.40e-10 | 34 |
gray matter | 1.40e-10 | 34 |
neurectoderm | 1.66e-10 | 86 |
pre-chordal neural plate | 2.55e-09 | 61 |
telencephalon | 4.08e-09 | 34 |
regional part of forebrain | 5.32e-09 | 41 |
forebrain | 5.32e-09 | 41 |
anterior neural tube | 5.32e-09 | 41 |
future forebrain | 5.32e-09 | 41 |
regional part of telencephalon | 9.07e-09 | 32 |
regional part of cerebral cortex | 5.88e-08 | 22 |
ecto-epithelium | 7.21e-08 | 104 |
structure with developmental contribution from neural crest | 9.00e-08 | 132 |
cerebral hemisphere | 1.04e-07 | 32 |