FFCP PHASE1:Hg19::chr16:1662351..1662442,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:1662351..1662442,+
|short_description=p1@CRAMP1L
|description=CAGE_peak_1_at_CRAMP1L_5end
|association_with_transcript=13bp_to_ENST00000397412_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57585 | |EntrezGene=57585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14122 | |HGNC=14122 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000397412_5end | |||
|cluster_id=chr16:1662351..1662442,+ | |||
|description=CAGE_peak_1_at_CRAMP1L_5end | |||
|id=chr16:1662351..1662442,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.61e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-22!115;UBERON:0001049!2.66e-17!57;UBERON:0005068!2.66e-17!57;UBERON:0006241!2.66e-17!57;UBERON:0007135!2.66e-17!57;UBERON:0001017!7.67e-14!82;UBERON:0000073!1.06e-13!94;UBERON:0001016!1.06e-13!94;UBERON:0000955!1.77e-13!69;UBERON:0006238!1.77e-13!69;UBERON:0002616!3.09e-13!59;UBERON:0005743!7.31e-13!86;UBERON:0003080!1.02e-12!42;UBERON:0002780!2.70e-12!41;UBERON:0001890!2.70e-12!41;UBERON:0006240!2.70e-12!41;UBERON:0002346!1.13e-11!90;UBERON:0003075!1.54e-11!86;UBERON:0007284!1.54e-11!86;UBERON:0002020!4.71e-10!34;UBERON:0003528!4.71e-10!34;UBERON:0001893!9.08e-10!34;UBERON:0002791!1.37e-09!33;UBERON:0001869!6.76e-09!32;UBERON:0002619!6.94e-08!22;UBERON:0003056!1.88e-07!61;UBERON:0001950!5.65e-07!20;UBERON:0000956!6.13e-07!25;UBERON:0000203!6.13e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.35e-09;53!UBERON:0002616;2.35e-09;53!UBERON:0002780;3.15e-09;41!UBERON:0001890;3.15e-09;41!UBERON:0003528;2.56e-08;34!UBERON:0002020;2.56e-08;34!UBERON:0001893;2.78e-08;34!UBERON:0002791;4.48e-08;32!UBERON:0001869;7.46e-08;32!UBERON:0002619;8.94e-08;22!UBERON:0007023;2.99e-07;114!UBERON:0001950;7.81e-07;20!UBERON:0000955;8.60e-07;68!UBERON:0000956;8.96e-07;25!UBERON:0000203;8.96e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.90e-22,114;UBERON:0001049,7.24e-17,56;UBERON:0005068,7.24e-17,56;UBERON:0006241,7.24e-17,56;UBERON:0007135,7.24e-17,56;UBERON:0000073,1.04e-15,53;UBERON:0002616,1.04e-15,53;UBERON:0001016,2.85e-14,89;UBERON:0001017,1.84e-13,81;UBERON:0000955,4.34e-13,68;UBERON:0006238,4.34e-13,68;UBERON:0002780,2.70e-12,41;UBERON:0001890,2.70e-12,41;UBERON:0003080,2.70e-12,41;UBERON:0006240,2.70e-12,41;UBERON:0002346,1.19e-11,86;UBERON:0003075,1.58e-11,82;UBERON:0007284,1.58e-11,82;UBERON:0003528,4.71e-10,34;UBERON:0002020,4.71e-10,34;UBERON:0001893,9.08e-10,34;UBERON:0002791,3.98e-09,32;UBERON:0001869,6.76e-09,32;UBERON:0010371,9.46e-09,104;UBERON:0002619,6.94e-08,22;UBERON:0003056,1.72e-07,61;UBERON:0001950,5.65e-07,20;UBERON:0000956,6.13e-07,25;UBERON:0000203,6.13e-07,25 | |||
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| ||
|short_description=p1@CRAMP1L | |||
}} | }} |
Latest revision as of 21:57, 24 September 2015
Short description: | p1@CRAMP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRAMP1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000397412_5end |
EntrezGene: | CRAMP1L |
HGNC: | 14122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.90e-22 | 114 |
neural tube | 7.24e-17 | 56 |
neural rod | 7.24e-17 | 56 |
future spinal cord | 7.24e-17 | 56 |
neural keel | 7.24e-17 | 56 |
regional part of nervous system | 1.04e-15 | 53 |
regional part of brain | 1.04e-15 | 53 |
nervous system | 2.85e-14 | 89 |
central nervous system | 1.84e-13 | 81 |
brain | 4.34e-13 | 68 |
future brain | 4.34e-13 | 68 |
regional part of forebrain | 2.70e-12 | 41 |
forebrain | 2.70e-12 | 41 |
anterior neural tube | 2.70e-12 | 41 |
future forebrain | 2.70e-12 | 41 |
neurectoderm | 1.19e-11 | 86 |
neural plate | 1.58e-11 | 82 |
presumptive neural plate | 1.58e-11 | 82 |
brain grey matter | 4.71e-10 | 34 |
gray matter | 4.71e-10 | 34 |
telencephalon | 9.08e-10 | 34 |
regional part of telencephalon | 3.98e-09 | 32 |
cerebral hemisphere | 6.76e-09 | 32 |
ecto-epithelium | 9.46e-09 | 104 |
regional part of cerebral cortex | 6.94e-08 | 22 |
pre-chordal neural plate | 1.72e-07 | 61 |
neocortex | 5.65e-07 | 20 |
cerebral cortex | 6.13e-07 | 25 |
pallium | 6.13e-07 | 25 |