FFCP PHASE1:Hg19::chr7:105603699..105603732,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222256 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26308 | |||
|TSSclassifier=strong | |||
|UniProt=E7EQG5 | |||
|association_with_transcript=0bp_to_ENST00000461766,ENST00000478080_5end | |||
|cluster_id=chr7:105603699..105603732,+ | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_2_at_CDHR3_5end | |||
|id=chr7:105603699..105603732,+ | |||
|ontology_enrichment_celltype=CL:0000453!4.31e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.12e-11;2!CL:0001016;5.12e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.26e-11,2;CL:0001016,5.26e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.55e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-34!115;UBERON:0001049!3.43e-14!57;UBERON:0005068!3.43e-14!57;UBERON:0006241!3.43e-14!57;UBERON:0007135!3.43e-14!57;UBERON:0003075!1.10e-12!86;UBERON:0007284!1.10e-12!86;UBERON:0002616!4.24e-12!59;UBERON:0001017!4.43e-12!82;UBERON:0002346!8.00e-12!90;UBERON:0005743!3.12e-11!86;UBERON:0000073!1.35e-09!94;UBERON:0001016!1.35e-09!94;UBERON:0000955!2.06e-09!69;UBERON:0006238!2.06e-09!69;UBERON:0002780!5.22e-09!41;UBERON:0001890!5.22e-09!41;UBERON:0006240!5.22e-09!41;UBERON:0003080!1.02e-08!42;UBERON:0001896!1.13e-08!3;UBERON:0005290!1.13e-08!3;UBERON:0010096!1.13e-08!3;UBERON:0002298!4.84e-08!8;UBERON:0003978!5.66e-08!3;UBERON:0009751!5.66e-08!3;UBERON:0000946!5.66e-08!3;UBERON:0002523!5.66e-08!3;UBERON:0005983!5.66e-08!3;UBERON:0002165!5.66e-08!3;UBERON:0002062!5.66e-08!3;UBERON:0007280!5.66e-08!3;UBERON:0000349!1.72e-07!5;UBERON:0003076!2.61e-07!15;UBERON:0003057!2.61e-07!15;UBERON:0002020!4.11e-07!34;UBERON:0003528!4.11e-07!34;UBERON:0004733!5.02e-07!12;UBERON:0002028!5.02e-07!12;UBERON:0007277!5.02e-07!12;UBERON:0002308!7.20e-07!9;UBERON:0000125!7.20e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;4.52e-20;6!UBERON:0001896;2.26e-15;3!UBERON:0005290;2.26e-15;3!UBERON:0000341;1.30e-11;2!UBERON:0003127;1.40e-11;2!UBERON:0001873;9.55e-11;2!UBERON:0002148;1.68e-10;2!UBERON:0006331;1.68e-10;2!UBERON:0009662;1.68e-10;2!UBERON:0004733;6.26e-10;12!UBERON:0002028;6.26e-10;12!UBERON:0002108;9.71e-10;4!UBERON:0004732;3.80e-09;13!UBERON:0000125;9.52e-09;9!UBERON:0002308;9.52e-09;9!UBERON:0005383;1.93e-07;3!UBERON:0005382;1.93e-07;3!UBERON:0000988;2.80e-07;3!UBERON:0005409;2.95e-07;22!UBERON:0004151;3.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,4.35e-20,6;UBERON:0007023,5.45e-16,114;UBERON:0001896,2.10e-15,3;UBERON:0005290,2.10e-15,3;UBERON:0010096,2.10e-15,3;UBERON:0000341,1.33e-11,2;UBERON:0003127,1.40e-11,2;UBERON:0003076,5.23e-11,15;UBERON:0003057,5.23e-11,15;UBERON:0001873,9.55e-11,2;UBERON:0010122,9.55e-11,2;UBERON:0002148,1.72e-10,2;UBERON:0006331,1.72e-10,2;UBERON:0009662,1.72e-10,2;UBERON:0004733,6.14e-10,12;UBERON:0002028,6.14e-10,12;UBERON:0007277,6.14e-10,12;UBERON:0002108,9.29e-10,4;UBERON:0004732,3.73e-09,13;UBERON:0000125,9.62e-09,9;UBERON:0002308,9.62e-09,9;UBERON:0005383,1.93e-07,3;UBERON:0005382,1.93e-07,3;UBERON:0000988,2.85e-07,3;UBERON:0004151,3.45e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71524671791765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38917682796405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,12.7518712480685,0,1.76352923497993,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,5.31444831488303,1.5677537021303,0,0.110579259931225,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71521770914025,1.83309043480088,0,0,0,2.42644078730437,0,0,0,0,0,0.394584402849391,4.83962864194656,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,6.63961339319714,0,0,0,0,2.81268147816416,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,1.43574604915363,0.599037001496973,1.71690419254628,1.33902874465124,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0.415440338029185,4.04953004792701,3.86900977278975,0,0,0,0,0,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0,0,0,2.45637617086946,1.45455861916959,0,0,19.1149468496173,100.453550958687,14.0841278818046,0,0,0,0,0,0,0,0,1.25643277000187,0,0,0,11.4681839138014,2.10765197920019,1.92498849118289,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4542356405468,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0.455324382702595,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0.233939463462106,0,0,0,0,0,6.17393264863557,3.93407208907123,2.35158648180761,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,5.84269110597214,0,0,0,0.0679914901909147,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0.50141507858475,0.909344378618873,0,0.829169439458779,0.620597975171371,14.0734428054647,13.3316081619695,0,0.0620747142958579,0,0.12729431655633,0.404234377916439,0.217716747896961,0,0.202056159043763,46.6194335052396,9.31448998328838,0,0,0,0,2.34640942403454,0.977931553462932,0.406896178315738,0,0,0 | |||
|short_description=p2@CDHR3 | |||
}} |
Latest revision as of 22:13, 24 September 2015
Short description: | p2@CDHR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDHR3_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 0bp_to_ENST00000461766, ENST00000478080_5end |
EntrezGene: | CDHR3 |
HGNC: | 26308 |
UniProt: | E7EQG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.26e-11 | 2 |
immature CD1a-positive Langerhans cell | 5.26e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
brainstem | 4.35e-20 | 6 |
adult organism | 5.45e-16 | 114 |
medulla oblongata | 2.10e-15 | 3 |
myelencephalon | 2.10e-15 | 3 |
future myelencephalon | 2.10e-15 | 3 |
throat | 1.33e-11 | 2 |
open tracheal system trachea | 1.40e-11 | 2 |
posterior neural tube | 5.23e-11 | 15 |
chordal neural plate | 5.23e-11 | 15 |
caudate nucleus | 9.55e-11 | 2 |
future caudate nucleus | 9.55e-11 | 2 |
locus ceruleus | 1.72e-10 | 2 |
brainstem nucleus | 1.72e-10 | 2 |
hindbrain nucleus | 1.72e-10 | 2 |
segmental subdivision of hindbrain | 6.14e-10 | 12 |
hindbrain | 6.14e-10 | 12 |
presumptive hindbrain | 6.14e-10 | 12 |
small intestine | 9.29e-10 | 4 |
segmental subdivision of nervous system | 3.73e-09 | 13 |
neural nucleus | 9.62e-09 | 9 |
nucleus of brain | 9.62e-09 | 9 |
caudate-putamen | 1.93e-07 | 3 |
dorsal striatum | 1.93e-07 | 3 |
pons | 2.85e-07 | 3 |
cardiac chamber | 3.45e-07 | 3 |