FFCP PHASE1:Hg19::chr12:80084018..80084035,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5074 | |EntrezGene=5074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |HGNC=8614 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-158bp_to_ENST00000551712_5end | |association_with_transcript=-158bp_to_ENST00000551712_5end | ||
|cluster_id=chr12:80084018..80084035,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_17_at_PAWR_5end | |description=CAGE_peak_17_at_PAWR_5end | ||
|id=chr12:80084018..80084035,- | |id=chr12:80084018..80084035,- | ||
|ontology_enrichment_celltype=CL:0002139!4.37e-20!24;CL:0000213!1.76e-18!57;CL:0000215!1.76e-18!57;CL:0000071!3.00e-15!18;CL:0002546!3.00e-15!18;CL:0000115!3.60e-15!35;CL:0002078!3.95e-13!44;CL:0000076!5.83e-12!62;CL:0000066!2.08e-11!254;CL:0000222!1.92e-08!119;CL:1000413!2.85e-08!9 | |ontology_enrichment_celltype=CL:0002139!4.37e-20!24;CL:0000213!1.76e-18!57;CL:0000215!1.76e-18!57;CL:0000071!3.00e-15!18;CL:0002546!3.00e-15!18;CL:0000115!3.60e-15!35;CL:0002078!3.95e-13!44;CL:0000076!5.83e-12!62;CL:0000066!2.08e-11!254;CL:0000222!1.92e-08!119;CL:1000413!2.85e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.81e-106;24!CL:0000115;2.19e-79;36!CL:0000071;2.48e-76;18!CL:0002078;6.28e-52;45!CL:0000213;1.48e-41;58!CL:0000215;1.48e-41;58!CL:1000413;4.65e-34;9!CL:0002138;9.26e-31;6!CL:0002543;7.11e-30;6!CL:0002544;3.94e-21;6!CL:0002618;2.35e-16;3!CL:0002144;8.54e-16;3!CL:0000076;1.10e-15;63!CL:0002188;1.18e-15;5!CL:0002545;2.33e-11;2!CL:1000746;3.18e-11;7!CL:1000612;3.18e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.13e-106,24;CL:0000115,1.94e-95,36;CL:0002078,7.52e-81,45;CL:0000071,2.30e-76,18;CL:0002546,2.30e-76,18;CL:0000213,8.35e-71,58;CL:0000215,8.35e-71,58;CL:1000413,6.64e-34,9;CL:0005020,7.05e-31,6;CL:0002138,7.05e-31,6;CL:0005022,7.05e-31,6;CL:0000222,1.47e-30,121;CL:0002543,5.86e-30,6;CL:0000076,8.05e-27,63;CL:0002544,4.57e-21,6;CL:0002618,2.55e-16,3;CL:0002144,6.34e-16,3;CL:0002188,1.55e-15,5;CL:0000066,2.01e-14,253;CL:0002321,2.69e-12,250;CL:0002545,2.34e-11,2;CL:1000746,3.86e-11,7;CL:1000612,3.86e-11,7 | |||
|ontology_enrichment_development_v019=CL:0002546;2.48e-76;18!CL:0005022;9.26e-31;6!CL:0000222;2.30e-10;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:201;3.87e-08;6!DOID:0060100;3.87e-08;6!DOID:3371;9.90e-07;1!DOID:4549;9.90e-07;1!DOID:5861;9.90e-07;1!DOID:6496;9.90e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:201,4.07e-08,6;DOID:0060100,4.07e-08,6;DOID:3371,9.91e-07,1;DOID:4549,9.91e-07,1;DOID:5861,9.91e-07,1;DOID:6496,9.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.00e-15!18;UBERON:0004638!3.00e-15!18;UBERON:0004852!3.00e-15!18;UBERON:0000487!2.41e-13!22;UBERON:0006914!9.37e-12!25;UBERON:0002049!3.38e-09!79;UBERON:0007798!3.38e-09!79;UBERON:0000477!7.04e-09!286;UBERON:0000055!1.92e-08!69;UBERON:0003915!2.85e-08!9;UBERON:0004700!2.85e-08!9;UBERON:0001917!2.85e-08!9 | |ontology_enrichment_uberon=UBERON:0001986!3.00e-15!18;UBERON:0004638!3.00e-15!18;UBERON:0004852!3.00e-15!18;UBERON:0000487!2.41e-13!22;UBERON:0006914!9.37e-12!25;UBERON:0002049!3.38e-09!79;UBERON:0007798!3.38e-09!79;UBERON:0000477!7.04e-09!286;UBERON:0000055!1.92e-08!69;UBERON:0003915!2.85e-08!9;UBERON:0004700!2.85e-08!9;UBERON:0001917!2.85e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.48e-76;18!UBERON:0001986;2.48e-76;18!UBERON:0004852;2.48e-76;18!UBERON:0000487;9.48e-62;22!UBERON:0006914;7.13e-54;25!UBERON:0000490;4.54e-40;33!UBERON:0003915;4.65e-34;9!UBERON:0004700;4.65e-34;9!UBERON:0001917;4.65e-34;9!UBERON:0001473;6.27e-23;8!UBERON:0004536;6.27e-23;8!UBERON:0006558;6.27e-23;8!UBERON:0000055;8.74e-20;65!UBERON:0001638;9.80e-20;9!UBERON:0003920;9.80e-20;9!UBERON:0004582;9.80e-20;9!UBERON:0002465;3.18e-18;10!UBERON:0010523;8.54e-16;3!UBERON:0001915;8.54e-16;3!UBERON:0001982;8.54e-16;3!UBERON:0007500;8.48e-15;56!UBERON:0001981;8.48e-15;56!UBERON:0004537;8.48e-15;56!UBERON:0002049;5.27e-14;75!UBERON:0007798;5.27e-14;75!UBERON:0003914;1.26e-11;74!UBERON:0005800;2.33e-11;2!UBERON:0001515;2.33e-11;2!UBERON:0000074;3.18e-11;7!UBERON:0001229;3.18e-11;7!UBERON:0002066;5.34e-10;5!UBERON:0000025;1.71e-08;93!UBERON:0004111;1.77e-08;130!UBERON:0002405;2.12e-08;27!UBERON:0001851;8.11e-08;15!UBERON:0004535;9.69e-08;109!UBERON:0001009;3.57e-07;112 | |||
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| ||
|short_description=p17@PAWR | |short_description=p17@PAWR | ||
}} | }} |
Latest revision as of 00:27, 25 September 2015
Short description: | p17@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PAWR_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | -158bp_to_ENST00000551712_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.13e-106 | 24 |
endothelial cell | 1.94e-95 | 36 |
meso-epithelial cell | 7.52e-81 | 45 |
blood vessel endothelial cell | 2.30e-76 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.30e-76 | 18 |
lining cell | 8.35e-71 | 58 |
barrier cell | 8.35e-71 | 58 |
endothelial cell of artery | 6.64e-34 | 9 |
lymphangioblast | 7.05e-31 | 6 |
endothelial cell of lymphatic vessel | 7.05e-31 | 6 |
vascular lymphangioblast | 7.05e-31 | 6 |
mesodermal cell | 1.47e-30 | 121 |
vein endothelial cell | 5.86e-30 | 6 |
squamous epithelial cell | 8.05e-27 | 63 |
aortic endothelial cell | 4.57e-21 | 6 |
endothelial cell of umbilical vein | 2.55e-16 | 3 |
capillary endothelial cell | 6.34e-16 | 3 |
glomerular endothelial cell | 1.55e-15 | 5 |
epithelial cell | 2.01e-14 | 253 |
embryonic cell | 2.69e-12 | 250 |
thoracic aorta endothelial cell | 2.34e-11 | 2 |
glomerular cell | 3.86e-11 | 7 |
kidney corpuscule cell | 3.86e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 4.07e-08 | 6 |
musculoskeletal system cancer | 4.07e-08 | 6 |
chondrosarcoma | 9.91e-07 | 1 |
extraosseous chondrosarcoma | 9.91e-07 | 1 |
myxoid chondrosarcoma | 9.91e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 9.91e-07 | 1 |