FFCP PHASE1:Hg19::chr12:80084768..80084821,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:80084768..80084821,- to FFCP PHASE1:Hg19::chr12:80084768..80084821,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5074 | |EntrezGene=5074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |HGNC=8614 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IZ0 | |UniProt=Q96IZ0 | ||
|association_with_transcript=0bp_to_NM_002583,uc001syx.2_5end | |||
|cluster_id=chr12:80084768..80084821,- | |||
|coexpression_cluster_id=C1688 | |||
|description=CAGE_peak_2_at_PAWR_5end | |||
|id=chr12:80084768..80084821,- | |||
|ontology_enrichment_celltype=CL:0000066!5.06e-50!254;CL:0002321!2.31e-15!248;CL:0000220!1.37e-14!246;CL:0000076!2.35e-11!62;CL:0000223!4.07e-11!59;CL:0002076!5.22e-09!43;CL:0000082!2.95e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.40e-07;42!CL:0000082;2.11e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.79e-51,253;CL:0002321,6.16e-15,250;CL:0000223,5.75e-12,58;CL:0000076,8.97e-11,63;CL:0002076,6.95e-10,42;CL:0000082,2.69e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.42e-10;30!UBERON:0008947;1.52e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.34e-35!106;DOID:0050687!4.47e-35!143;DOID:162!9.07e-20!235;DOID:14566!1.48e-19!239;DOID:299!6.02e-09!25;DOID:7!7.21e-09!39;DOID:0050615!2.26e-07!16;DOID:1324!8.99e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:305;3.92e-11;106!DOID:299;5.03e-09;25!DOID:0050687;1.19e-07;143!DOID:0050615;1.58e-07;16!DOID:7;4.68e-07;39!DOID:1324;6.32e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.74e-36,106;DOID:0050687,6.55e-35,143;DOID:162,6.21e-20,235;DOID:14566,1.02e-19,239;DOID:299,5.34e-09,25;DOID:7,6.41e-09,39;DOID:0050615,2.06e-07,16;DOID:1324,8.26e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.03e-17!169;UBERON:0000925!1.03e-17!169;UBERON:0006595!1.03e-17!169;UBERON:0000466!1.59e-16!126;UBERON:0001007!4.02e-16!155;UBERON:0001555!4.02e-16!155;UBERON:0007026!4.02e-16!155;UBERON:0009569!1.82e-13!113;UBERON:0000464!3.10e-13!104;UBERON:0004921!6.71e-13!129;UBERON:0004185!6.71e-13!129;UBERON:0000077!1.38e-12!130;UBERON:0001048!1.83e-12!168;UBERON:0005911!1.31e-11!82;UBERON:0005177!2.91e-11!107;UBERON:0000468!4.07e-10!659;UBERON:0000481!1.18e-09!347;UBERON:0003104!2.03e-09!238;UBERON:0009142!2.03e-09!238;UBERON:0001041!2.21e-09!98;UBERON:0000475!3.30e-09!365;UBERON:0001004!9.18e-09!72;UBERON:0005153!1.11e-08!37;UBERON:0002100!1.37e-08!216;UBERON:0002553!1.65e-08!70;UBERON:0008947!1.98e-08!38;UBERON:0003258!1.98e-08!38;UBERON:0002417!4.95e-08!61;UBERON:0000916!4.95e-08!61;UBERON:0003886!8.56e-08!63;UBERON:0000065!1.55e-07!53;UBERON:0005157!1.92e-07!51;UBERON:0004802!2.95e-07!19;UBERON:0000115!2.95e-07!19;UBERON:0002048!3.12e-07!22;UBERON:0000117!3.12e-07!22;UBERON:0000171!3.12e-07!22;UBERON:0000170!3.12e-07!22;UBERON:0005597!3.12e-07!22;UBERON:0000118!3.12e-07!22;UBERON:0005172!3.36e-07!55;UBERON:0005173!3.36e-07!55;UBERON:0005156!6.67e-07!59;UBERON:0000990!6.67e-07!59;UBERON:0000477!9.80e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;1.23e-07;22!UBERON:0004802;2.11e-07;19!UBERON:0000115;2.11e-07;19!UBERON:0002048;2.47e-07;22!UBERON:0000117;2.47e-07;22!UBERON:0000171;2.47e-07;22!UBERON:0000170;2.47e-07;22!UBERON:0000065;6.29e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.84e-17,160;UBERON:0000925,2.84e-17,160;UBERON:0006595,2.84e-17,160;UBERON:0001007,3.31e-16,145;UBERON:0001555,3.31e-16,145;UBERON:0007026,3.31e-16,145;UBERON:0009569,6.54e-14,112;UBERON:0004921,5.48e-13,118;UBERON:0005177,6.40e-13,101;UBERON:0005911,1.24e-11,82;UBERON:0001048,2.65e-11,160;UBERON:0001041,1.79e-09,87;UBERON:0002100,4.88e-09,199;UBERON:0005153,9.90e-09,37;UBERON:0008947,1.77e-08,38;UBERON:0003258,1.77e-08,38;UBERON:0002417,2.07e-08,60;UBERON:0000916,2.07e-08,60;UBERON:0001004,2.84e-08,74;UBERON:0005172,1.44e-07,54;UBERON:0005173,1.44e-07,54;UBERON:0004802,2.69e-07,19;UBERON:0000115,2.69e-07,19;UBERON:0002048,2.84e-07,22;UBERON:0000117,2.84e-07,22;UBERON:0000171,2.84e-07,22;UBERON:0000170,2.84e-07,22;UBERON:0005597,2.84e-07,22;UBERON:0000118,2.84e-07,22;UBERON:0002553,3.92e-07,61;UBERON:0005157,4.64e-07,47;UBERON:0000065,5.22e-07,54;UBERON:0005156,5.68e-07,59;UBERON:0000990,5.68e-07,59 | |||
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| ||
|short_description=p2@PAWR | |||
}} | }} |
Latest revision as of 00:36, 25 September 2015
Short description: | p2@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAWR_5end |
Coexpression cluster: | C1688_pancreatic_large_testicular_oral_extraskeletal_mesothelioma_small |
Association with transcript: | 0bp_to_NM_002583, uc001syx.2_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | Q96IZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.79e-51 | 253 |
embryonic cell | 6.16e-15 | 250 |
endodermal cell | 5.75e-12 | 58 |
squamous epithelial cell | 8.97e-11 | 63 |
endo-epithelial cell | 6.95e-10 | 42 |
epithelial cell of lung | 2.69e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.84e-17 | 160 |
endoderm | 2.84e-17 | 160 |
presumptive endoderm | 2.84e-17 | 160 |
digestive system | 3.31e-16 | 145 |
digestive tract | 3.31e-16 | 145 |
primitive gut | 3.31e-16 | 145 |
subdivision of trunk | 6.54e-14 | 112 |
subdivision of digestive tract | 5.48e-13 | 118 |
trunk region element | 6.40e-13 | 101 |
endo-epithelium | 1.24e-11 | 82 |
primordium | 2.65e-11 | 160 |
foregut | 1.79e-09 | 87 |
trunk | 4.88e-09 | 199 |
epithelial bud | 9.90e-09 | 37 |
respiratory primordium | 1.77e-08 | 38 |
endoderm of foregut | 1.77e-08 | 38 |
abdominal segment of trunk | 2.07e-08 | 60 |
abdomen | 2.07e-08 | 60 |
respiratory system | 2.84e-08 | 74 |
abdomen element | 1.44e-07 | 54 |
abdominal segment element | 1.44e-07 | 54 |
respiratory tract epithelium | 2.69e-07 | 19 |
lung epithelium | 2.69e-07 | 19 |
lung | 2.84e-07 | 22 |
respiratory tube | 2.84e-07 | 22 |
respiration organ | 2.84e-07 | 22 |
pair of lungs | 2.84e-07 | 22 |
lung primordium | 2.84e-07 | 22 |
lung bud | 2.84e-07 | 22 |
anatomical cavity | 3.92e-07 | 61 |
epithelial fold | 4.64e-07 | 47 |
respiratory tract | 5.22e-07 | 54 |
reproductive structure | 5.68e-07 | 59 |
reproductive system | 5.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.74e-36 | 106 |
cell type cancer | 6.55e-35 | 143 |
cancer | 6.21e-20 | 235 |
disease of cellular proliferation | 1.02e-19 | 239 |
adenocarcinoma | 5.34e-09 | 25 |
disease of anatomical entity | 6.41e-09 | 39 |
respiratory system cancer | 2.06e-07 | 16 |
lung cancer | 8.26e-07 | 15 |