FFCP PHASE1:Hg19::chr22:43808085..43808135,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=758 | |EntrezGene=758 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1306 | |HGNC=1306 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6C9,B4DS06,O15442,F5H4N0,A8K159 | |UniProt=F5H6C9,B4DS06,O15442,F5H4N0,A8K159 | ||
|association_with_transcript=65bp_to_ENST00000414469,ENST00000439548,ENST00000443721,ENST00000545165,NM_001044370,uc011apv.1,uc011apw.1,uc011apx.1_5end | |association_with_transcript=65bp_to_ENST00000414469,ENST00000439548,ENST00000443721,ENST00000545165,NM_001044370,uc011apv.1,uc011apw.1,uc011apx.1_5end | ||
|cluster_id=chr22:43808085..43808135,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_1_at_MPPED1_5end | |description=CAGE_peak_1_at_MPPED1_5end | ||
Latest revision as of 01:37, 25 September 2015
| Short description: | p1@MPPED1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_MPPED1_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | 65bp_to_ENST00000414469, ENST00000439548, ENST00000443721, ENST00000545165, NM_001044370, uc011apv.1, uc011apw.1, uc011apx.1_5end |
| EntrezGene: | MPPED1 |
| HGNC: | 1306 |
| UniProt: | F5H6C9B4DS06O15442F5H4N0A8K159 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@MPPED1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 2.62e-09 | 8 |
| neuron | 2.27e-07 | 6 |
| neuroblast | 2.27e-07 | 6 |
| electrically signaling cell | 2.27e-07 | 6 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 5.92e-86 | 22 |
| neocortex | 3.91e-78 | 20 |
| telencephalon | 6.30e-77 | 34 |
| cerebral hemisphere | 7.80e-76 | 32 |
| cerebral cortex | 2.10e-75 | 25 |
| pallium | 2.10e-75 | 25 |
| brain grey matter | 1.10e-70 | 34 |
| gray matter | 1.10e-70 | 34 |
| regional part of telencephalon | 1.57e-69 | 32 |
| regional part of forebrain | 4.84e-63 | 41 |
Showing 1 to 10 of 58 entries
