FFCP PHASE1:Hg19::chr22:44568847..44568879,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |||
|TSSclassifier=strong | |||
|UniProt=B4DDW5 | |||
|association_with_transcript=0bp_to_ENST00000453888_5end | |||
|cluster_id=chr22:44568847..44568879,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_7_at_PARVG_5end | |||
|id=chr22:44568847..44568879,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.99e-50!65;CL:0002194!2.58e-50!63;CL:0000576!2.58e-50!63;CL:0000040!2.58e-50!63;CL:0000559!2.58e-50!63;CL:0000763!8.27e-49!112;CL:0000049!8.27e-49!112;CL:0000557!7.80e-47!71;CL:0000839!1.46e-43!70;CL:0000766!2.10e-42!76;CL:0002057!4.73e-37!42;CL:0000860!9.70e-34!45;CL:0000037!6.72e-30!172;CL:0000566!6.72e-30!172;CL:0002032!7.62e-28!165;CL:0000837!7.62e-28!165;CL:0000988!5.61e-27!182;CL:0002087!9.61e-24!119;CL:0000738!1.86e-20!140;CL:0002031!2.60e-19!124;CL:0002393!5.06e-07!9;CL:0002397!5.06e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.44e-35;39!CL:0000234;1.44e-35;39!CL:0000576;1.92e-26;48!CL:0000860;1.92e-25;33!CL:0002057;1.92e-25;33!CL:0000235;1.71e-24;6!CL:0000766;1.15e-22;69!CL:0000763;8.51e-21;100!CL:0002619;2.94e-13;3!CL:0000738;9.80e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.32e-56,59;CL:0000576,1.32e-56,59;CL:0000040,1.32e-56,59;CL:0000559,1.32e-56,59;CL:0000763,4.47e-55,108;CL:0000049,4.47e-55,108;CL:0002009,1.60e-54,61;CL:0000557,2.67e-52,67;CL:0000839,7.38e-50,66;CL:0000766,4.18e-45,72;CL:0000473,4.58e-42,48;CL:0000234,4.58e-42,48;CL:0002032,7.27e-34,161;CL:0000837,7.27e-34,161;CL:0000037,4.67e-32,168;CL:0000988,6.09e-30,177;CL:0000860,4.00e-26,42;CL:0002057,4.00e-26,42;CL:0002087,1.90e-25,115;CL:0000235,1.76e-24,6;CL:0002031,4.51e-24,120;CL:0000738,2.39e-20,136;CL:0002619,2.88e-13,3;CL:0000134,3.65e-10,354;CL:0002320,8.79e-10,361;CL:0000219,1.93e-08,386;CL:0000034,7.31e-07,441;CL:0000048,8.21e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-21;42!CL:0000049;2.50e-19;108 | |||
|ontology_enrichment_disease=DOID:8692!6.87e-12!31;DOID:1240!2.39e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.14e-17;31!DOID:1240;6.26e-12;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.22e-18,31;DOID:1240,5.40e-14,39;DOID:2531,5.15e-10,51;DOID:0060083,5.15e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-41!102;UBERON:0003061!1.89e-41!102;UBERON:0002371!2.04e-41!80;UBERON:0002193!1.42e-38!112;UBERON:0001474!2.85e-37!86;UBERON:0002405!4.05e-29!115;UBERON:0004765!4.18e-29!101;UBERON:0001434!4.18e-29!101;UBERON:0003081!2.21e-14!216;UBERON:0007023!7.45e-14!115;UBERON:0002204!3.85e-13!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.12e-45,76;UBERON:0001474,2.26e-41,82;UBERON:0004765,5.10e-37,90;UBERON:0002405,1.41e-35,93;UBERON:0002390,2.27e-33,98;UBERON:0003061,2.27e-33,98;UBERON:0001434,1.50e-32,100;UBERON:0002193,1.45e-29,108;UBERON:0002204,2.24e-16,167;UBERON:0003081,4.10e-12,203;UBERON:0002384,5.18e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0.880801318004542,0,0,0.651032612147555,27.7655188057506,48.260156236828,12.1060516788068,0.872389432677388,0.755751887377619,1.4555043671269,1.39457422143411,2.46700732813095,0.929119112685311,0,1.0246428261164,0.709446689665756,2.06847408441971,2.5819387343353,1.35426486594342,1.50593871634084,1.63743690034707,1.57306439111559,0.918251677112708,2.56743221660875,1.91801137739712,0,1.19678194572979,0.426224750532694,0.290209238628584,2.26954089876456,0.622822248995575,0.251248665256743,0,0,0.605399502633369,1.84138817993782,0.632924774881769,1.26753171787165,1.06302149982522,0.838634582033504,1.46027220490444,1.05123824989054,0.803627933485401,0.570025487482497,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0.174129737299267,2.39324328933957,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0646332982825,6.78612368903789,6.8370334652815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.8384207731214,13.5609414686674,25.3000727379638,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,5.92686031626872,0.649243880549111,0.280797178113459,3.87998954356427,3.29027781123349,2.50634477090067,0,4.33587802779989,5.44859209415828,4.25846237690326,3.09154810280188,3.99412993600995,2.23676107892416,4.0043794010858,5.66625476665917,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,2.04628948090749,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.674921674654501,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0,0,0,2.0289608387862,0.471612915298998,2.89967338743037,0.496166021811951,0,0,0,0,0,0,0,1.09937867375164,0,0.122026264901963,0,0.573409195690071,0.554645257684261,0.620964029413834,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,4.80112783623634,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0.620060389503552,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,8.88969961156001,0,0,0.11294608203896,0,1.20770274853339,0,0,3.76253837089218,0,0,2.74831853960923,2.37637120261669,0,0,0.563903507879121,0.580120991762195,0,0,0,0,0,0,0.860037498908708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0.213233981900981,0,0,0.31037357147929,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |||
|short_description=p7@PARVG | |||
}} |
Latest revision as of 02:25, 25 September 2015
Short description: | p7@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PARVG_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000453888_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | B4DDW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.32e-56 | 59 |
monocyte | 1.32e-56 | 59 |
monoblast | 1.32e-56 | 59 |
promonocyte | 1.32e-56 | 59 |
myeloid cell | 4.47e-55 | 108 |
common myeloid progenitor | 4.47e-55 | 108 |
macrophage dendritic cell progenitor | 1.60e-54 | 61 |
granulocyte monocyte progenitor cell | 2.67e-52 | 67 |
myeloid lineage restricted progenitor cell | 7.38e-50 | 66 |
myeloid leukocyte | 4.18e-45 | 72 |
defensive cell | 4.58e-42 | 48 |
phagocyte | 4.58e-42 | 48 |
hematopoietic oligopotent progenitor cell | 7.27e-34 | 161 |
hematopoietic multipotent progenitor cell | 7.27e-34 | 161 |
hematopoietic stem cell | 4.67e-32 | 168 |
hematopoietic cell | 6.09e-30 | 177 |
classical monocyte | 4.00e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.00e-26 | 42 |
nongranular leukocyte | 1.90e-25 | 115 |
macrophage | 1.76e-24 | 6 |
hematopoietic lineage restricted progenitor cell | 4.51e-24 | 120 |
leukocyte | 2.39e-20 | 136 |
adult endothelial progenitor cell | 2.88e-13 | 3 |
mesenchymal cell | 3.65e-10 | 354 |
connective tissue cell | 8.79e-10 | 361 |
motile cell | 1.93e-08 | 386 |
stem cell | 7.31e-07 | 441 |
multi fate stem cell | 8.21e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.12e-45 | 76 |
bone element | 2.26e-41 | 82 |
skeletal element | 5.10e-37 | 90 |
immune system | 1.41e-35 | 93 |
hematopoietic system | 2.27e-33 | 98 |
blood island | 2.27e-33 | 98 |
skeletal system | 1.50e-32 | 100 |
hemolymphoid system | 1.45e-29 | 108 |
musculoskeletal system | 2.24e-16 | 167 |
lateral plate mesoderm | 4.10e-12 | 203 |
connective tissue | 5.18e-10 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.22e-18 | 31 |
leukemia | 5.40e-14 | 39 |
hematologic cancer | 5.15e-10 | 51 |
immune system cancer | 5.15e-10 | 51 |