FFCP PHASE1:Hg19::chr16:20775026..20775029,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6296 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10522 | |||
|TSSclassifier=strong | |||
|UniProt=Q53FZ2 | |||
|association_with_transcript=-282bp_to_ENST00000289416,ENST00000440284,NM_005622,NM_202000,uc002dhq.2,uc002dhr.2_5end | |||
|cluster_id=chr16:20775026..20775029,+ | |||
|description=CAGE_peak_3_at_ACSM3_5end | |||
|id=chr16:20775026..20775029,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.00e-22!140;CL:0002031!3.39e-21!124;CL:0002087!3.97e-20!119;CL:0000037!7.69e-18!172;CL:0000566!7.69e-18!172;CL:0000988!1.01e-16!182;CL:0002032!3.02e-15!165;CL:0000837!3.02e-15!165;CL:0000766!1.93e-12!76;CL:0000839!6.74e-12!70;CL:0000791!8.27e-12!18;CL:0000789!8.27e-12!18;CL:0002420!8.27e-12!18;CL:0002419!8.27e-12!18;CL:0000790!8.27e-12!18;CL:0000557!7.39e-11!71;CL:0000838!1.80e-10!52;CL:0000542!4.71e-10!53;CL:0000051!4.71e-10!53;CL:0002194!4.44e-09!63;CL:0000576!4.44e-09!63;CL:0000040!4.44e-09!63;CL:0000559!4.44e-09!63;CL:0002009!1.94e-08!65;CL:0000084!4.93e-08!25;CL:0000827!4.93e-08!25;CL:0000625!9.10e-08!11;CL:0002057!1.11e-07!42;CL:0000860!4.17e-07!45;CL:0000763!8.81e-07!112;CL:0000049!8.81e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.30e-12;5!CL:0000791;5.50e-12;18!CL:0000789;5.50e-12;18!CL:0002419;5.50e-12;18!CL:0000084;1.63e-11;25!CL:0002619;1.40e-09;3!CL:0000767;2.74e-09;3!CL:0000625;2.81e-09;11!CL:0000163;6.42e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.09e-14,136;CL:0000037,2.92e-12,168;CL:0000097,3.45e-12,5;CL:0002028,3.45e-12,5;CL:0000791,4.63e-12,18;CL:0000789,4.63e-12,18;CL:0002420,4.63e-12,18;CL:0002419,4.63e-12,18;CL:0000790,4.63e-12,18;CL:0002031,1.12e-11,120;CL:0000084,1.46e-11,25;CL:0000827,1.46e-11,25;CL:0002032,1.58e-11,161;CL:0000837,1.58e-11,161;CL:0000988,2.00e-11,177;CL:0002619,2.23e-09,3;CL:0002087,2.76e-09,115;CL:0000625,2.82e-09,11;CL:0000767,4.01e-09,3;CL:0000838,1.98e-08,52;CL:0000542,3.05e-08,53;CL:0000051,3.05e-08,53;CL:0000163,5.70e-07,9;CL:0000766,6.01e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;5.50e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.39e-07;1!DOID:0070004;1.39e-07;1!DOID:6193;1.39e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.15e-07,1;DOID:0070004,1.15e-07,1;DOID:6193,1.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-14!102;UBERON:0003061!1.23e-14!102;UBERON:0002193!7.87e-13!112;UBERON:0002371!1.69e-10!80;UBERON:0001474!2.43e-09!86;UBERON:0002405!2.69e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.39e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.47e-07,1;UBERON:0002390,6.26e-07,98;UBERON:0003061,6.26e-07,98 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,1.18009283054671,0.383829398097213,1.23852898652861,0,0,0,0.0774672005803016,0,0.880801318004542,0,0.200544447470142,0.651032612147555,0.671746422719773,2.26725566213286,1.03030227053675,0.581592955118259,0.755751887377619,1.4555043671269,0.232429036905685,0,0.929119112685311,0.863077176966451,0.256160706529101,0,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0.449446968890169,0,0.962787081228281,0,0,0.598390972864896,0,0,0,0.622822248995575,0,0,0.65156653411535,0,0,1.26584954976354,0.845021145247767,0.637812899895131,0.838634582033504,0.561643155732475,0.750884464207532,0.803627933485401,0,0.99458338599545,0.547992461293902,1.75996244461323,0.546138611262131,0,0.426730222566507,0.800791974072025,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0.263384084775077,1.37696839079683,0.393010762749165,1.43921049299656,0.668745981562712,0.651844533267181,1.4203434172042,0,0.445641827540694,0.589211814949674,0.886135578334485,0.270803863765016,0.384273959177026,0.260118695119756,0.493313713811028,0.552700035571697,0.289803085735052,0.741432815810302,1.07016331235885,0,0.226618685395132,0.383220493601921,0.34362744548263,1.01207876807801,1.27426165729639,0,0.950452044448374,0.451725357233318,1.02389288923535,1.24930726552346,1.65744076430812,0.821127996921047,0.80642697289893,0.267440195783507,0.579297615531196,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0.715471872916026,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.276149695926898,0.646584227275248,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0.985326475791887,1.23267807618516,0.829312462163088,1.44119953416961,2.27236380167484,0,0.381988425558278,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0,0,1.6541442089831,0.647142602455851,0.533637789017222,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0.356128142586949,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,1.13929437434833,0.714695326373367,0.822724546172388,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0.383010740264733,0,0,1.40398589056729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,2.00598091699461,0,0.23874448473769,1.18785872333055,0,0,0,0.111308705022906,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0.692552326534174,0,0,0.448788222048861,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0.317873157960757,0,0,0,0.216388639742091,0,0.530745387020035,2.4441205797345,0.296521128680622,0.247127877893006,0.104421949505455,0,0.802577647298789,0,0,0.391329237864179,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0.52418000472609,1.20390222730132,0.0967563312890851,0,0,0.872901148395775,0,0.90392296312213,0,0,0,0.586654148204409,0,0.426905989478705,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.13480708770837,0,0.0846733320657845,0,0,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.577000469484979,0.528001682597033,0.179287339332845,0.959575986597226,0,0,0,0,0,0,0,0.164185041498678,0,0.566560457600628,0.293104467356165,0,0,0,0.171086837884329,0,0.747511887973863,0.943225830597996,0.828478110694391,0.496166021811951,0.197611631897944,0.121792598380896,0,0.5440178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| |||
|short_description=p3@ACSM3 | |||
}} |
Latest revision as of 02:30, 25 September 2015
Short description: | p3@ACSM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACSM3_5end |
Coexpression cluster: | NA |
Association with transcript: | -282bp_to_ENST00000289416, ENST00000440284, NM_005622, NM_202000, uc002dhq.2, uc002dhr.2_5end |
EntrezGene: | ACSM3 |
HGNC: | 10522 |
UniProt: | Q53FZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.09e-14 | 136 |
hematopoietic stem cell | 2.92e-12 | 168 |
mast cell | 3.45e-12 | 5 |
basophil mast progenitor cell | 3.45e-12 | 5 |
mature alpha-beta T cell | 4.63e-12 | 18 |
alpha-beta T cell | 4.63e-12 | 18 |
immature T cell | 4.63e-12 | 18 |
mature T cell | 4.63e-12 | 18 |
immature alpha-beta T cell | 4.63e-12 | 18 |
hematopoietic lineage restricted progenitor cell | 1.12e-11 | 120 |
T cell | 1.46e-11 | 25 |
pro-T cell | 1.46e-11 | 25 |
hematopoietic oligopotent progenitor cell | 1.58e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-11 | 161 |
hematopoietic cell | 2.00e-11 | 177 |
adult endothelial progenitor cell | 2.23e-09 | 3 |
nongranular leukocyte | 2.76e-09 | 115 |
CD8-positive, alpha-beta T cell | 2.82e-09 | 11 |
basophil | 4.01e-09 | 3 |
lymphoid lineage restricted progenitor cell | 1.98e-08 | 52 |
lymphocyte | 3.05e-08 | 53 |
common lymphoid progenitor | 3.05e-08 | 53 |
endocrine cell | 5.70e-07 | 9 |
myeloid leukocyte | 6.01e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.47e-07 | 1 |
hematopoietic system | 6.26e-07 | 98 |
blood island | 6.26e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.15e-07 | 1 |
myeloma | 1.15e-07 | 1 |
epithelioid sarcoma | 1.91e-07 | 1 |