FFCP PHASE1:Hg19::chr14:65569186..65569243,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:65569186..65569243,- to FFCP PHASE1:Hg19::chr14:65569186..65569243,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4149 | |EntrezGene=4149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6913 | |HGNC=6913 | ||
|TSSclassifier=strong | |||
|UniProt=Q96CY8,Q14803,P61244,Q6V3B1,G3V2N4,G3V2R5,G3V563,Q8TAX8,A6NH73 | |UniProt=Q96CY8,Q14803,P61244,Q6V3B1,G3V2N4,G3V2R5,G3V563,Q8TAX8,A6NH73 | ||
|association_with_transcript=0bp_to_ENST00000246163,ENST00000284165,ENST00000358402,ENST00000358664,ENST00000394606,ENST00000554709,ENST00000555667,ENST00000555932,ENST00000556443,ENST00000556702,ENST00000556979,ENST00000557746,NM_002382,NM_145112,NM_145113,NM_145114,NM_145116,NM_197957,uc001xic.1,uc001xie.1,uc001xif.1,uc001xig.1,uc001xih.1,uc001xii.1,uc001xij.1,uc001xik.2,uc010aql.1_5end | |||
|cluster_id=chr14:65569186..65569243,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_MAX_5end | |||
|id=chr14:65569186..65569243,- | |||
|ontology_enrichment_celltype=CL:0000738!1.40e-10!140;CL:0000037!9.91e-10!172;CL:0000566!9.91e-10!172;CL:0000988!4.90e-09!182;CL:0002032!1.49e-08!165;CL:0000837!1.49e-08!165;CL:0002087!9.63e-08!119;CL:0002031!9.68e-08!124;CL:0000791!4.82e-07!18;CL:0000789!4.82e-07!18;CL:0002420!4.82e-07!18;CL:0002419!4.82e-07!18;CL:0000790!4.82e-07!18;CL:0000838!6.32e-07!52;CL:0000542!9.17e-07!53;CL:0000051!9.17e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.78e-07;18!CL:0000789;4.78e-07;18!CL:0002419;4.78e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.57e-11,136;CL:0000037,1.60e-10,168;CL:0000988,5.91e-10,177;CL:0002032,2.69e-09,161;CL:0000837,2.69e-09,161;CL:0002087,1.38e-08,115;CL:0002031,1.46e-08,120;CL:0000791,4.82e-07,18;CL:0000789,4.82e-07,18;CL:0002420,4.82e-07,18;CL:0002419,4.82e-07,18;CL:0000790,4.82e-07,18;CL:0000838,6.32e-07,52;CL:0000542,9.17e-07,53;CL:0000051,9.17e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;4.78e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.44e-15!115;UBERON:0002193!1.04e-07!112;UBERON:0002390!3.54e-07!102;UBERON:0003061!3.54e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.58e-15,114;UBERON:0002193,1.39e-08,108;UBERON:0002390,4.66e-08,98;UBERON:0003061,4.66e-08,98 | |||
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| ||
|short_description=p1@MAX | |||
}} | }} |
Latest revision as of 03:05, 25 September 2015
Short description: | p1@MAX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAX_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000246163, ENST00000284165, ENST00000358402, ENST00000358664, ENST00000394606, ENST00000554709, ENST00000555667, ENST00000555932, ENST00000556443, ENST00000556702, ENST00000556979, ENST00000557746, NM_002382, NM_145112, NM_145113, NM_145114, NM_145116, NM_197957, uc001xic.1, uc001xie.1, uc001xif.1, uc001xig.1, uc001xih.1, uc001xii.1, uc001xij.1, uc001xik.2, uc010aql.1_5end |
EntrezGene: | MAX |
HGNC: | 6913 |
UniProt: | Q96CY8Q14803P61244Q6V3B1G3V2N4G3V2R5G3V563Q8TAX8A6NH73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.57e-11 | 136 |
hematopoietic stem cell | 1.60e-10 | 168 |
hematopoietic cell | 5.91e-10 | 177 |
hematopoietic oligopotent progenitor cell | 2.69e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.69e-09 | 161 |
nongranular leukocyte | 1.38e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.46e-08 | 120 |
mature alpha-beta T cell | 4.82e-07 | 18 |
alpha-beta T cell | 4.82e-07 | 18 |
immature T cell | 4.82e-07 | 18 |
mature T cell | 4.82e-07 | 18 |
immature alpha-beta T cell | 4.82e-07 | 18 |
lymphoid lineage restricted progenitor cell | 6.32e-07 | 52 |
lymphocyte | 9.17e-07 | 53 |
common lymphoid progenitor | 9.17e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.58e-15 | 114 |
hemolymphoid system | 1.39e-08 | 108 |
hematopoietic system | 4.66e-08 | 98 |
blood island | 4.66e-08 | 98 |