FFCP PHASE1:Hg19::chr6:138192133..138192144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7128 | |EntrezGene=7128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |HGNC=11896 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7A9,F5GYN2,F5H1G3 | |UniProt=F5H7A9,F5GYN2,F5H1G3 | ||
|association_with_transcript=-203bp_to_ENST00000535332,ENST00000535574,ENST00000539356_5end | |association_with_transcript=-203bp_to_ENST00000535332,ENST00000535574,ENST00000539356_5end | ||
|cluster_id=chr6:138192133..138192144,+ | |||
|coexpression_cluster_id=C730 | |||
|description=CAGE_peak_19_at_TNFAIP3_5end | |description=CAGE_peak_19_at_TNFAIP3_5end | ||
|id=chr6:138192133..138192144,+ | |id=chr6:138192133..138192144,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.18e-29!140;CL:0002087!4.39e-25!119;CL:0002031!1.37e-23!124;CL:0000988!4.00e-21!182;CL:0000037!2.75e-20!172;CL:0000566!2.75e-20!172;CL:0002032!3.90e-19!165;CL:0000837!3.90e-19!165;CL:0000542!5.23e-16!53;CL:0000051!5.23e-16!53;CL:0000838!3.07e-15!52;CL:0000624!2.74e-10!6;CL:0000990!2.75e-10!8;CL:0000084!6.46e-10!25;CL:0000827!6.46e-10!25;CL:0000557!9.25e-10!71;CL:0000080!1.05e-09!6;CL:0000766!1.69e-09!76;CL:0000791!2.30e-09!18;CL:0000789!2.30e-09!18;CL:0002420!2.30e-09!18;CL:0002419!2.30e-09!18;CL:0000790!2.30e-09!18;CL:0000839!4.86e-09!70;CL:0002057!1.41e-08!42;CL:0002009!1.43e-08!65;CL:0002194!4.23e-08!63;CL:0000576!4.23e-08!63;CL:0000040!4.23e-08!63;CL:0000559!4.23e-08!63;CL:0000451!4.27e-08!10;CL:0000860!1.14e-07!45;CL:0000048!6.88e-07!430;CL:0000723!7.08e-07!436 | |ontology_enrichment_celltype=CL:0000738!2.18e-29!140;CL:0002087!4.39e-25!119;CL:0002031!1.37e-23!124;CL:0000988!4.00e-21!182;CL:0000037!2.75e-20!172;CL:0000566!2.75e-20!172;CL:0002032!3.90e-19!165;CL:0000837!3.90e-19!165;CL:0000542!5.23e-16!53;CL:0000051!5.23e-16!53;CL:0000838!3.07e-15!52;CL:0000624!2.74e-10!6;CL:0000990!2.75e-10!8;CL:0000084!6.46e-10!25;CL:0000827!6.46e-10!25;CL:0000557!9.25e-10!71;CL:0000080!1.05e-09!6;CL:0000766!1.69e-09!76;CL:0000791!2.30e-09!18;CL:0000789!2.30e-09!18;CL:0002420!2.30e-09!18;CL:0002419!2.30e-09!18;CL:0000790!2.30e-09!18;CL:0000839!4.86e-09!70;CL:0002057!1.41e-08!42;CL:0002009!1.43e-08!65;CL:0002194!4.23e-08!63;CL:0000576!4.23e-08!63;CL:0000040!4.23e-08!63;CL:0000559!4.23e-08!63;CL:0000451!4.27e-08!10;CL:0000860!1.14e-07!45;CL:0000048!6.88e-07!430;CL:0000723!7.08e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.11e-18;6!CL:0000815;4.95e-15;2!CL:0000792;4.95e-15;2!CL:0002677;4.95e-15;2!CL:0000453;8.71e-14;5!CL:0000791;2.05e-13;18!CL:0000789;2.05e-13;18!CL:0002419;2.05e-13;18!CL:0000898;2.52e-10;3!CL:0000542;1.26e-09;53!CL:0000084;1.63e-09;25!CL:0000990;7.29e-08;8!CL:0000945;4.31e-07;24!CL:0002087;6.05e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.88e-18,6;CL:0000838,5.26e-17,52;CL:0000542,1.21e-16,53;CL:0000051,1.21e-16,53;CL:0000738,2.10e-16,136;CL:0000815,3.88e-15,2;CL:0000792,3.88e-15,2;CL:0002677,3.88e-15,2;CL:0000988,9.34e-15,177;CL:0000453,8.93e-14,5;CL:0000791,2.15e-13,18;CL:0000789,2.15e-13,18;CL:0002420,2.15e-13,18;CL:0002419,2.15e-13,18;CL:0000790,2.15e-13,18;CL:0002032,2.85e-13,161;CL:0000837,2.85e-13,161;CL:0002031,4.23e-13,120;CL:0000037,1.46e-12,168;CL:0002087,4.51e-12,115;CL:0000898,2.15e-10,3;CL:0000084,1.68e-09,25;CL:0000827,1.68e-09,25;CL:0000990,7.39e-08,8;CL:0000945,3.39e-07,24;CL:0000826,3.39e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.05e-13;18!CL:0000051;1.26e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;3.56e-08;1!DOID:0050177;3.56e-08;1!DOID:0050427;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.88e-08,1;DOID:0050177,1.88e-08,1;DOID:0050427,1.88e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.92e-15!112;UBERON:0002390!5.80e-14!102;UBERON:0003061!5.80e-14!102;UBERON:0002405!1.37e-10!115;UBERON:0002371!1.61e-08!80;UBERON:0003081!6.04e-08!216;UBERON:0001474!2.08e-07!86;UBERON:0004177!7.93e-07!7 | |ontology_enrichment_uberon=UBERON:0002193!3.92e-15!112;UBERON:0002390!5.80e-14!102;UBERON:0003061!5.80e-14!102;UBERON:0002405!1.37e-10!115;UBERON:0002371!1.61e-08!80;UBERON:0003081!6.04e-08!216;UBERON:0001474!2.08e-07!86;UBERON:0004177!7.93e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p19@TNFAIP3 | |short_description=p19@TNFAIP3 | ||
}} | }} |
Latest revision as of 03:20, 25 September 2015
Short description: | p19@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TNFAIP3_5end |
Coexpression cluster: | C730_migratory_cord_Mast_B_b_CD14_CD19 |
Association with transcript: | -203bp_to_ENST00000535332, ENST00000535574, ENST00000539356_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | F5H7A9F5GYN2F5H1G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.88e-18 | 6 |
lymphoid lineage restricted progenitor cell | 5.26e-17 | 52 |
lymphocyte | 1.21e-16 | 53 |
common lymphoid progenitor | 1.21e-16 | 53 |
leukocyte | 2.10e-16 | 136 |
regulatory T cell | 3.88e-15 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.88e-15 | 2 |
naive regulatory T cell | 3.88e-15 | 2 |
hematopoietic cell | 9.34e-15 | 177 |
Langerhans cell | 8.93e-14 | 5 |
mature alpha-beta T cell | 2.15e-13 | 18 |
alpha-beta T cell | 2.15e-13 | 18 |
immature T cell | 2.15e-13 | 18 |
mature T cell | 2.15e-13 | 18 |
immature alpha-beta T cell | 2.15e-13 | 18 |
hematopoietic oligopotent progenitor cell | 2.85e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.85e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 4.23e-13 | 120 |
hematopoietic stem cell | 1.46e-12 | 168 |
nongranular leukocyte | 4.51e-12 | 115 |
naive T cell | 2.15e-10 | 3 |
T cell | 1.68e-09 | 25 |
pro-T cell | 1.68e-09 | 25 |
conventional dendritic cell | 7.39e-08 | 8 |
lymphocyte of B lineage | 3.39e-07 | 24 |
pro-B cell | 3.39e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.88e-08 | 1 |
monogenic disease | 1.88e-08 | 1 |
xeroderma pigmentosum | 1.88e-08 | 1 |