FFCP PHASE1:Hg19::chr1:218519166..218519227,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:218519166..218519227,+ to FFCP PHASE1:Hg19::chr1:218519166..218519227,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7042 | |EntrezGene=7042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11768 | |HGNC=11768 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-163bp_to_uc001hll.2,uc001hlm.2,uc001hln.2,uc001hlo.2,uc010pue.1_5end | |||
|cluster_id=chr1:218519166..218519227,+ | |||
|coexpression_cluster_id=C927 | |||
|description=CAGE_peak_4_at_TGFB2_5end | |||
|id=chr1:218519166..218519227,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.51e-09!180;CL:0000359!2.24e-08!32;CL:0000183!1.20e-07!59;CL:0000192!1.99e-07!42;CL:0000514!1.99e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.89e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.52e-08,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.41e-23!365;UBERON:0000481!4.13e-22!347;UBERON:0000119!4.35e-22!312;UBERON:0004121!1.83e-21!169;UBERON:0000477!3.61e-21!286;UBERON:0000483!1.04e-20!309;UBERON:0000033!1.75e-20!123;UBERON:0000924!3.63e-20!173;UBERON:0006601!3.63e-20!173;UBERON:0005743!4.74e-20!86;UBERON:0001017!1.66e-19!82;UBERON:0000073!1.84e-19!94;UBERON:0001016!1.84e-19!94;UBERON:0000153!8.92e-19!129;UBERON:0007811!8.92e-19!129;UBERON:0003075!1.32e-18!86;UBERON:0007284!1.32e-18!86;UBERON:0000955!4.56e-18!69;UBERON:0006238!4.56e-18!69;UBERON:0004111!1.33e-17!241;UBERON:0002616!7.29e-17!59;UBERON:0002346!8.45e-17!90;UBERON:0001049!3.15e-15!57;UBERON:0005068!3.15e-15!57;UBERON:0006241!3.15e-15!57;UBERON:0007135!3.15e-15!57;UBERON:0000025!4.10e-15!194;UBERON:0000468!9.93e-13!659;UBERON:0003056!8.59e-12!61;UBERON:0002020!1.23e-10!34;UBERON:0003528!1.23e-10!34;UBERON:0001893!1.85e-10!34;UBERON:0000467!3.45e-10!625;UBERON:0002791!3.89e-10!33;UBERON:0001869!4.35e-10!32;UBERON:0002050!4.79e-10!605;UBERON:0005423!4.79e-10!605;UBERON:0002780!5.01e-10!41;UBERON:0001890!5.01e-10!41;UBERON:0006240!5.01e-10!41;UBERON:0003080!5.45e-10!42;UBERON:0000480!5.50e-10!626;UBERON:0000922!5.80e-10!612;UBERON:0000923!9.17e-10!604;UBERON:0005291!9.17e-10!604;UBERON:0006598!9.17e-10!604;UBERON:0002532!9.17e-10!604;UBERON:0000064!9.71e-10!219;UBERON:0005256!1.06e-08!143;UBERON:0000062!1.34e-08!511;UBERON:0000956!3.84e-08!25;UBERON:0000203!3.84e-08!25;UBERON:0002100!1.08e-07!216;UBERON:0002200!1.72e-07!11;UBERON:0006876!1.72e-07!11;UBERON:0002385!2.06e-07!63;UBERON:0001015!2.06e-07!63;UBERON:0000383!2.06e-07!63;UBERON:0000914!2.27e-07!83;UBERON:0002329!2.27e-07!83;UBERON:0003077!2.27e-07!83;UBERON:0003059!2.27e-07!83;UBERON:0007282!2.27e-07!83;UBERON:0009618!2.27e-07!83;UBERON:0007285!2.27e-07!83;UBERON:0001134!2.48e-07!61;UBERON:0002036!2.48e-07!61;UBERON:0003082!2.48e-07!61;UBERON:0002619!5.54e-07!22;UBERON:0003076!8.05e-07!15;UBERON:0003057!8.05e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.98e-11;34!UBERON:0001869;4.44e-11;32!UBERON:0003528;6.05e-11;34!UBERON:0002020;6.05e-11;34!UBERON:0002791;7.47e-11;32!UBERON:0000956;1.58e-09;25!UBERON:0000203;1.58e-09;25!UBERON:0002780;5.12e-09;41!UBERON:0001890;5.12e-09;41!UBERON:0000955;5.60e-09;68!UBERON:0000073;5.89e-09;53!UBERON:0002616;5.89e-09;53!UBERON:0001017;7.93e-09;75!UBERON:0006876;2.55e-08;11!UBERON:0002619;4.52e-08;22!UBERON:0001016;1.49e-07;83!UBERON:0001950;4.41e-07;20 | |||
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| ||
|short_description=p4@TGFB2 | |||
}} | }} |
Latest revision as of 04:31, 25 September 2015
Short description: | p4@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGFB2_5end |
Coexpression cluster: | C927_Lens_gall_Ciliary_mesodermal_Fibroblast_Meningeal_cholangiocellular |
Association with transcript: | -163bp_to_uc001hll.2, uc001hlm.2, uc001hln.2, uc001hlo.2, uc010pue.1_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.52e-08 | 32 |