FFCP PHASE1:Hg19::chr9:130540938..130540952,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10044 | |EntrezGene=10044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |HGNC=16884 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000473535,uc004bsd.1_5end | |association_with_transcript=21bp_to_ENST00000473535,uc004bsd.1_5end | ||
|cluster_id=chr9:130540938..130540952,- | |||
|coexpression_cluster_id=C299 | |coexpression_cluster_id=C299 | ||
|description=CAGE_peak_2_at_SH2D3C_5end | |description=CAGE_peak_2_at_SH2D3C_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.05e-73!172;CL:0000566!1.05e-73!172;CL:0002032!7.13e-69!165;CL:0000837!7.13e-69!165;CL:0000988!1.48e-67!182;CL:0000738!1.29e-66!140;CL:0002087!1.19e-58!119;CL:0002031!4.00e-57!124;CL:0000763!2.46e-44!112;CL:0000049!2.46e-44!112;CL:0000766!4.01e-43!76;CL:0002057!3.63e-36!42;CL:0000839!3.80e-36!70;CL:0000557!6.87e-36!71;CL:0002194!4.87e-34!63;CL:0000576!4.87e-34!63;CL:0000040!4.87e-34!63;CL:0000559!4.87e-34!63;CL:0002009!2.24e-33!65;CL:0000860!2.29e-32!45;CL:0000542!1.46e-20!53;CL:0000051!1.46e-20!53;CL:0000838!7.63e-20!52;CL:0000945!5.04e-14!24;CL:0000826!5.04e-14!24;CL:0000134!1.60e-11!358;CL:0002320!3.78e-11!365;CL:0002393!8.81e-10!9;CL:0002397!8.81e-10!9;CL:0000236!1.19e-09!14;CL:0000094!8.18e-09!8;CL:0000791!4.31e-08!18;CL:0000789!4.31e-08!18;CL:0002420!4.31e-08!18;CL:0002419!4.31e-08!18;CL:0000790!4.31e-08!18;CL:0000219!3.02e-07!390 | |ontology_enrichment_celltype=CL:0000037!1.05e-73!172;CL:0000566!1.05e-73!172;CL:0002032!7.13e-69!165;CL:0000837!7.13e-69!165;CL:0000988!1.48e-67!182;CL:0000738!1.29e-66!140;CL:0002087!1.19e-58!119;CL:0002031!4.00e-57!124;CL:0000763!2.46e-44!112;CL:0000049!2.46e-44!112;CL:0000766!4.01e-43!76;CL:0002057!3.63e-36!42;CL:0000839!3.80e-36!70;CL:0000557!6.87e-36!71;CL:0002194!4.87e-34!63;CL:0000576!4.87e-34!63;CL:0000040!4.87e-34!63;CL:0000559!4.87e-34!63;CL:0002009!2.24e-33!65;CL:0000860!2.29e-32!45;CL:0000542!1.46e-20!53;CL:0000051!1.46e-20!53;CL:0000838!7.63e-20!52;CL:0000945!5.04e-14!24;CL:0000826!5.04e-14!24;CL:0000134!1.60e-11!358;CL:0002320!3.78e-11!365;CL:0002393!8.81e-10!9;CL:0002397!8.81e-10!9;CL:0000236!1.19e-09!14;CL:0000094!8.18e-09!8;CL:0000791!4.31e-08!18;CL:0000789!4.31e-08!18;CL:0002420!4.31e-08!18;CL:0002419!4.31e-08!18;CL:0000790!4.31e-08!18;CL:0000219!3.02e-07!390 | ||
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|ontology_enrichment_development_v019=CL:0002057;1.62e-37;42!CL:0000049;2.18e-16;108!CL:0000051;6.33e-08;53 | |ontology_enrichment_development_v019=CL:0002057;1.62e-37;42!CL:0000049;2.18e-16;108!CL:0000051;6.33e-08;53 | ||
|ontology_enrichment_disease=DOID:2531!2.87e-08!51;DOID:0060083!2.87e-08!51;DOID:1240!3.10e-07!39 | |ontology_enrichment_disease=DOID:2531!2.87e-08!51;DOID:0060083!2.87e-08!51;DOID:1240!3.10e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.57e-07;31 | |ontology_enrichment_disease_v019=DOID:8692;1.57e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,5.39e-08,39;DOID:8692,5.81e-08,31;DOID:2531,5.47e-07,51;DOID:0060083,5.47e-07,51 | |||
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| ||
|short_description=p2@SH2D3C | |short_description=p2@SH2D3C | ||
}} | }} |
Latest revision as of 05:13, 25 September 2015
Short description: | p2@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SH2D3C_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 21bp_to_ENST00000473535, uc004bsd.1_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.70e-56 | 98 |
blood island | 2.70e-56 | 98 |
hemolymphoid system | 8.18e-52 | 108 |
bone marrow | 2.20e-43 | 76 |
immune system | 3.86e-40 | 93 |
bone element | 9.24e-39 | 82 |
skeletal element | 1.42e-33 | 90 |
skeletal system | 2.70e-28 | 100 |
lateral plate mesoderm | 3.42e-18 | 203 |
connective tissue | 3.52e-18 | 371 |
blood | 2.37e-12 | 15 |
haemolymphatic fluid | 2.37e-12 | 15 |
organism substance | 2.37e-12 | 15 |
musculoskeletal system | 1.58e-10 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.39e-08 | 39 |
myeloid leukemia | 5.81e-08 | 31 |
hematologic cancer | 5.47e-07 | 51 |
immune system cancer | 5.47e-07 | 51 |