FFCP PHASE1:Hg19::chr9:130541033..130541046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10044 | |EntrezGene=10044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |HGNC=16884 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5H7 | |UniProt=Q8N5H7 | ||
|association_with_transcript=1bp_to_NM_170600,uc004bsc.2_5end | |association_with_transcript=1bp_to_NM_170600,uc004bsc.2_5end | ||
|cluster_id=chr9:130541033..130541046,- | |||
|description=CAGE_peak_11_at_SH2D3C_5end | |description=CAGE_peak_11_at_SH2D3C_5end | ||
|id=chr9:130541033..130541046,- | |id=chr9:130541033..130541046,- | ||
|ontology_enrichment_celltype=CL:0000037!2.56e-44!172;CL:0000566!2.56e-44!172;CL:0000738!6.99e-43!140;CL:0000988!2.20e-41!182;CL:0000542!9.14e-41!53;CL:0000051!9.14e-41!53;CL:0000838!1.86e-39!52;CL:0002032!3.69e-39!165;CL:0000837!3.69e-39!165;CL:0002087!2.60e-35!119;CL:0002031!2.24e-32!124;CL:0000084!3.69e-19!25;CL:0000827!3.69e-19!25;CL:0000791!9.19e-18!18;CL:0000789!9.19e-18!18;CL:0002420!9.19e-18!18;CL:0002419!9.19e-18!18;CL:0000790!9.19e-18!18;CL:0000945!1.15e-17!24;CL:0000826!1.15e-17!24;CL:0000625!1.69e-09!11;CL:0000763!3.58e-09!112;CL:0000049!3.58e-09!112;CL:0000624!9.55e-09!6;CL:0000134!1.98e-08!358;CL:0002320!7.45e-08!365;CL:0002057!1.92e-07!42;CL:0000236!2.20e-07!14 | |ontology_enrichment_celltype=CL:0000037!2.56e-44!172;CL:0000566!2.56e-44!172;CL:0000738!6.99e-43!140;CL:0000988!2.20e-41!182;CL:0000542!9.14e-41!53;CL:0000051!9.14e-41!53;CL:0000838!1.86e-39!52;CL:0002032!3.69e-39!165;CL:0000837!3.69e-39!165;CL:0002087!2.60e-35!119;CL:0002031!2.24e-32!124;CL:0000084!3.69e-19!25;CL:0000827!3.69e-19!25;CL:0000791!9.19e-18!18;CL:0000789!9.19e-18!18;CL:0002420!9.19e-18!18;CL:0002419!9.19e-18!18;CL:0000790!9.19e-18!18;CL:0000945!1.15e-17!24;CL:0000826!1.15e-17!24;CL:0000625!1.69e-09!11;CL:0000763!3.58e-09!112;CL:0000049!3.58e-09!112;CL:0000624!9.55e-09!6;CL:0000134!1.98e-08!358;CL:0002320!7.45e-08!365;CL:0002057!1.92e-07!42;CL:0000236!2.20e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.05e-16;53!CL:0000084;7.23e-16;25!CL:0000791;1.51e-13;18!CL:0000789;1.51e-13;18!CL:0002419;1.51e-13;18!CL:0000945;6.80e-13;24!CL:0000625;6.10e-08;11!CL:0002032;5.26e-07;1!CL:0000557;5.26e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.11e-31,53;CL:0000051,1.11e-31,53;CL:0000838,6.61e-29,52;CL:0000084,6.14e-16,25;CL:0000827,6.14e-16,25;CL:0002087,2.11e-15,115;CL:0000738,8.97e-14,136;CL:0000791,1.29e-13,18;CL:0000789,1.29e-13,18;CL:0002420,1.29e-13,18;CL:0002419,1.29e-13,18;CL:0000790,1.29e-13,18;CL:0000037,9.46e-13,168;CL:0000945,1.13e-12,24;CL:0000826,1.13e-12,24;CL:0002032,3.27e-12,161;CL:0000837,3.27e-12,161;CL:0000988,7.60e-12,177;CL:0002031,1.36e-11,120;CL:0000625,5.34e-08,11;CL:0000817,6.49e-08,3;CL:0002127,8.97e-07,1;CL:0000914,8.97e-07,1;CL:0000911,8.97e-07,1;CL:0000814,8.97e-07,1;CL:0002042,8.97e-07,1;CL:0002039,8.97e-07,1;CL:0002040,8.97e-07,1;CL:0002041,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.05e-16;53!CL:0000790;1.51e-13;18 | |||
|ontology_enrichment_disease=DOID:2531!8.58e-10!51;DOID:0060083!8.58e-10!51;DOID:1240!9.84e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-12!102;UBERON:0003061!1.50e-12!102;UBERON:0002193!3.53e-11!112;UBERON:0004177!6.02e-10!7;UBERON:0002384!1.85e-07!375;UBERON:0002370!4.20e-07!4;UBERON:0005058!4.20e-07!4;UBERON:0009113!4.20e-07!4;UBERON:0003295!4.20e-07!4;UBERON:0005562!4.20e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.62e-12;2!UBERON:0005058;6.62e-12;2!UBERON:0009113;6.62e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.00e-13,4;UBERON:0005058,5.00e-13,4;UBERON:0009113,5.00e-13,4;UBERON:0003295,5.00e-13,4;UBERON:0005562,5.00e-13,4;UBERON:0003351,7.76e-09,6;UBERON:0004177,1.24e-07,7;UBERON:0005057,1.24e-07,7 | |||
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|short_description=p11@SH2D3C | |short_description=p11@SH2D3C | ||
}} | }} |
Latest revision as of 05:18, 25 September 2015
Short description: | p11@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SH2D3C_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_NM_170600, uc004bsc.2_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | Q8N5H7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.11e-31 | 53 |
common lymphoid progenitor | 1.11e-31 | 53 |
lymphoid lineage restricted progenitor cell | 6.61e-29 | 52 |
T cell | 6.14e-16 | 25 |
pro-T cell | 6.14e-16 | 25 |
nongranular leukocyte | 2.11e-15 | 115 |
leukocyte | 8.97e-14 | 136 |
mature alpha-beta T cell | 1.29e-13 | 18 |
alpha-beta T cell | 1.29e-13 | 18 |
immature T cell | 1.29e-13 | 18 |
mature T cell | 1.29e-13 | 18 |
immature alpha-beta T cell | 1.29e-13 | 18 |
hematopoietic stem cell | 9.46e-13 | 168 |
lymphocyte of B lineage | 1.13e-12 | 24 |
pro-B cell | 1.13e-12 | 24 |
hematopoietic oligopotent progenitor cell | 3.27e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.27e-12 | 161 |
hematopoietic cell | 7.60e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.36e-11 | 120 |
CD8-positive, alpha-beta T cell | 5.34e-08 | 11 |
precursor B cell | 6.49e-08 | 3 |
innate effector T cell | 8.97e-07 | 1 |
immature NK T cell | 8.97e-07 | 1 |
effector T cell | 8.97e-07 | 1 |
mature NK T cell | 8.97e-07 | 1 |
immature NK T cell stage IV | 8.97e-07 | 1 |
immature NK T cell stage I | 8.97e-07 | 1 |
immature NK T cell stage II | 8.97e-07 | 1 |
immature NK T cell stage III | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.00e-13 | 4 |
hemolymphoid system gland | 5.00e-13 | 4 |
thymic region | 5.00e-13 | 4 |
pharyngeal gland | 5.00e-13 | 4 |
thymus primordium | 5.00e-13 | 4 |
pharyngeal epithelium | 7.76e-09 | 6 |
hemopoietic organ | 1.24e-07 | 7 |
immune organ | 1.24e-07 | 7 |