FFCP PHASE1:Hg19::chr19:1174205..1174224,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22904 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29158 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2G9 | |||
|association_with_transcript=57bp_to_ENST00000361757,NM_014963,uc002lrk.3,uc010dse.2_5end | |||
|cluster_id=chr19:1174205..1174224,- | |||
|description=CAGE_peak_3_at_SBNO2_5end | |||
|id=chr19:1174205..1174224,- | |||
|ontology_enrichment_celltype=CL:0000066!1.21e-15!254;CL:0000860!4.00e-12!45;CL:0002057!3.63e-11!42;CL:0002009!3.89e-10!65;CL:0000766!5.58e-10!76;CL:0000557!2.77e-09!71;CL:0002194!2.78e-09!63;CL:0000576!2.78e-09!63;CL:0000040!2.78e-09!63;CL:0000559!2.78e-09!63;CL:0000063!1.09e-08!578;CL:0000548!1.94e-08!679;CL:0000004!1.94e-08!679;CL:0000255!1.94e-08!679;CL:0000012!4.50e-08!682;CL:0000763!7.54e-08!112;CL:0000049!7.54e-08!112;CL:0000839!5.30e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.16e-10;33!CL:0002057;2.16e-10;33!CL:0000576;2.41e-07;48!CL:0000473;3.34e-07;39!CL:0000234;3.34e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.04e-15,253;CL:0000860,3.53e-11,42;CL:0002057,3.53e-11,42;CL:0000473,3.82e-09,48;CL:0000234,3.82e-09,48;CL:0002009,3.85e-09,61;CL:0000766,5.20e-09,72;CL:0002194,2.62e-08,59;CL:0000576,2.62e-08,59;CL:0000040,2.62e-08,59;CL:0000559,2.62e-08,59;CL:0000557,2.69e-08,67;CL:0000763,5.68e-07,108;CL:0000049,5.68e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.42e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.06e-13!112;UBERON:0002405!3.05e-12!115;UBERON:0002390!4.33e-11!102;UBERON:0003061!4.33e-11!102;UBERON:0005177!1.10e-08!107;UBERON:0005172!5.66e-08!55;UBERON:0005173!5.66e-08!55;UBERON:0002371!7.44e-08!80;UBERON:0001474!1.08e-07!86;UBERON:0000466!1.27e-07!126;UBERON:0003887!6.24e-07!21 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.28e-12,108;UBERON:0002390,4.09e-10,98;UBERON:0003061,4.09e-10,98;UBERON:0002405,1.16e-09,93;UBERON:0005177,5.86e-09,101;UBERON:0005172,9.06e-08,54;UBERON:0005173,9.06e-08,54;UBERON:0002371,5.89e-07,76;UBERON:0001474,8.10e-07,82 | |||
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| |||
|short_description=p3@SBNO2 | |||
}} |
Latest revision as of 06:34, 25 September 2015
Short description: | p3@SBNO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SBNO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENST00000361757, NM_014963, uc002lrk.3, uc010dse.2_5end |
EntrezGene: | SBNO2 |
HGNC: | 29158 |
UniProt: | Q9Y2G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.04e-15 | 253 |
classical monocyte | 3.53e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-11 | 42 |
defensive cell | 3.82e-09 | 48 |
phagocyte | 3.82e-09 | 48 |
macrophage dendritic cell progenitor | 3.85e-09 | 61 |
myeloid leukocyte | 5.20e-09 | 72 |
monopoietic cell | 2.62e-08 | 59 |
monocyte | 2.62e-08 | 59 |
monoblast | 2.62e-08 | 59 |
promonocyte | 2.62e-08 | 59 |
granulocyte monocyte progenitor cell | 2.69e-08 | 67 |
myeloid cell | 5.68e-07 | 108 |
common myeloid progenitor | 5.68e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.28e-12 | 108 |
hematopoietic system | 4.09e-10 | 98 |
blood island | 4.09e-10 | 98 |
immune system | 1.16e-09 | 93 |
trunk region element | 5.86e-09 | 101 |
abdomen element | 9.06e-08 | 54 |
abdominal segment element | 9.06e-08 | 54 |
bone marrow | 5.89e-07 | 76 |
bone element | 8.10e-07 | 82 |