FFCP PHASE1:Hg19::chr3:145940194..145940211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57088 | |EntrezGene=57088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16497 | |HGNC=16497 | ||
|TSSclassifier=strong | |||
|UniProt=C9J664 | |UniProt=C9J664 | ||
|association_with_transcript=8bp_to_ENST00000481701_5end | |||
|cluster_id=chr3:145940194..145940211,- | |||
|description=CAGE_peak_12_at_PLSCR4_5end | |||
|id=chr3:145940194..145940211,- | |||
|ontology_enrichment_celltype=CL:0002139!2.62e-29!24;CL:0000115!1.67e-23!35;CL:0002078!2.04e-19!44;CL:0000071!5.01e-17!18;CL:0002546!5.01e-17!18;CL:0005020!2.26e-15!6;CL:0002138!2.26e-15!6;CL:0005022!2.26e-15!6;CL:0000213!1.22e-13!57;CL:0000215!1.22e-13!57;CL:1000413!1.13e-09!9;CL:0002144!6.51e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.03e-28;6!CL:0002262;1.26e-21;2!CL:1000398;1.26e-21;2!CL:0002139;5.08e-21;24!CL:0000115;1.00e-20;36!CL:0002078;1.12e-12;45!CL:1000413;3.68e-11;9!CL:0000182;2.47e-08;12!CL:0002544;6.05e-08;6!CL:0000213;5.80e-07;58!CL:0000215;5.80e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.24e-28,6;CL:0002138,1.24e-28,6;CL:0005022,1.24e-28,6;CL:0000115,1.48e-22,36;CL:0002262,1.02e-21,2;CL:1000398,1.02e-21,2;CL:0002139,5.49e-21,24;CL:0002078,7.93e-18,45;CL:0000213,1.41e-13,58;CL:0000215,1.41e-13,58;CL:1000413,3.68e-11,9;CL:0000182,2.12e-08,12;CL:0002544,6.16e-08,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.03e-28;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.35e-19!115;UBERON:0001986!5.01e-17!18;UBERON:0004638!5.01e-17!18;UBERON:0004852!5.01e-17!18;UBERON:0000055!3.29e-14!69;UBERON:0004111!6.23e-14!241;UBERON:0000487!2.19e-13!22;UBERON:0000477!5.59e-13!286;UBERON:0002049!1.02e-12!79;UBERON:0007798!1.02e-12!79;UBERON:0001009!2.89e-12!113;UBERON:0004872!3.50e-12!84;UBERON:0004535!1.01e-11!110;UBERON:0006914!1.98e-11!25;UBERON:0001473!2.66e-11!8;UBERON:0004536!2.66e-11!8;UBERON:0006558!2.66e-11!8;UBERON:0000025!7.91e-11!194;UBERON:0003915!1.13e-09!9;UBERON:0004700!1.13e-09!9;UBERON:0001917!1.13e-09!9;UBERON:0002465!7.33e-09!10;UBERON:0001981!1.28e-08!60;UBERON:0007500!1.28e-08!60;UBERON:0004537!1.28e-08!60;UBERON:0006965!1.28e-08!60;UBERON:0003914!1.84e-08!118;UBERON:0001915!6.51e-08!3;UBERON:0001982!6.51e-08!3;UBERON:0006331!3.06e-07!3;UBERON:0002298!5.59e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.26e-21;2!UBERON:0003497;1.26e-21;2!UBERON:0003909;1.26e-21;2!UBERON:0003835;1.26e-21;2!UBERON:0001473;1.27e-21;8!UBERON:0004536;1.27e-21;8!UBERON:0006558;1.27e-21;8!UBERON:0002465;2.33e-17;10!UBERON:0001280;9.29e-15;3!UBERON:0004647;9.29e-15;3!UBERON:0002134;4.78e-12;1!UBERON:0005208;4.78e-12;1!UBERON:0004145;4.78e-12;1!UBERON:0005946;4.78e-12;1!UBERON:0005965;4.78e-12;1!UBERON:0002078;4.78e-12;1!UBERON:0000996;1.07e-11;1!UBERON:0003915;3.68e-11;9!UBERON:0004700;3.68e-11;9!UBERON:0001917;3.68e-11;9!UBERON:0000055;7.28e-10;65!UBERON:0002107;5.99e-09;19!UBERON:0006925;5.99e-09;19!UBERON:0002423;7.68e-07;25!UBERON:0003513;7.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.02e-21,2;UBERON:0003497,1.02e-21,2;UBERON:0003909,1.02e-21,2;UBERON:0003835,1.02e-21,2;UBERON:0001473,1.45e-21,8;UBERON:0004536,1.45e-21,8;UBERON:0006558,1.45e-21,8;UBERON:0002465,2.59e-17,10;UBERON:0001280,8.08e-15,3;UBERON:0004647,8.08e-15,3;UBERON:0005171,8.08e-15,3;UBERON:0000055,3.80e-14,68;UBERON:0002049,3.71e-12,78;UBERON:0007798,3.71e-12,78;UBERON:0002134,5.05e-12,1;UBERON:0005208,5.05e-12,1;UBERON:0005946,5.05e-12,1;UBERON:0005965,5.05e-12,1;UBERON:0002078,5.05e-12,1;UBERON:0000996,6.26e-12,1;UBERON:0003915,3.68e-11,9;UBERON:0004700,3.68e-11,9;UBERON:0001917,3.68e-11,9;UBERON:0001009,8.75e-10,112;UBERON:0002107,5.75e-09,19;UBERON:0006925,5.75e-09,19;UBERON:0008836,5.75e-09,19;UBERON:0004535,2.67e-08,109;UBERON:0002394,7.33e-08,6;UBERON:0003928,7.33e-08,6;UBERON:0008835,9.08e-08,22;UBERON:0003894,9.08e-08,22;UBERON:0009854,1.95e-07,23;UBERON:0003513,7.41e-07,7;UBERON:0007499,7.44e-07,25;UBERON:0009497,7.44e-07,25;UBERON:0000015,7.44e-07,25;UBERON:0002423,7.44e-07,25;UBERON:0006235,7.44e-07,25;UBERON:0004161,7.44e-07,25 | |||
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| ||
|short_description=p12@PLSCR4 | |||
}} | }} |
Latest revision as of 06:40, 25 September 2015
Short description: | p12@PLSCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PLSCR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000481701_5end |
EntrezGene: | PLSCR4 |
HGNC: | 16497 |
UniProt: | C9J664 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.24e-28 | 6 |
endothelial cell of lymphatic vessel | 1.24e-28 | 6 |
vascular lymphangioblast | 1.24e-28 | 6 |
endothelial cell | 1.48e-22 | 36 |
endothelial cell of sinusoid | 1.02e-21 | 2 |
endothelial cell of hepatic sinusoid | 1.02e-21 | 2 |
endothelial cell of vascular tree | 5.49e-21 | 24 |
meso-epithelial cell | 7.93e-18 | 45 |
lining cell | 1.41e-13 | 58 |
barrier cell | 1.41e-13 | 58 |
endothelial cell of artery | 3.68e-11 | 9 |
hepatocyte | 2.12e-08 | 12 |
aortic endothelial cell | 6.16e-08 | 6 |