FFCP PHASE1:Mm9::chr7:107756807..107756822,-: Difference between revisions
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{{FFCP|EntrezGene=52443|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=0bp_to_ENSMUST00000146003_5end|description=CAGE_peak_3_at_Mrpl48_5end|id=chr7:107756807..107756822,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!7.95e-14!122;UBERON:0000025!3.36e-12!114;UBERON:0000955!3.38e-09!50;UBERON:0006238!3.38e-09!50;UBERON:0001049!7.23e-09!52;UBERON:0005068!7.23e-09!52;UBERON:0006241!7.23e-09!52;UBERON:0007135!7.23e-09!52;UBERON:0002616!9.13e-09!49;UBERON:0002021!3.30e-08!10;UBERON:0000411!3.30e-08!10;UBERON:0001950!3.30e-08!10;UBERON:0000033!8.45e-08!63;UBERON:0001017!2.73e-07!73;UBERON:0005743!2.73e-07!73;UBERON:0004121!5.56e-07!102;UBERON:0000924!5.56e-07!102;UBERON:0006601!5.56e-07!102;UBERON:0000073!7.63e-07!75;UBERON:0001016!7.63e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.85e-13,122;UBERON:0000025,6.21e-12,114;UBERON:0000073,7.63e-12,54;UBERON:0001049,1.16e-10,52;UBERON:0005068,1.16e-10,52;UBERON:0006241,1.16e-10,52;UBERON:0007135,1.16e-10,52;UBERON:0002021,7.82e-10,10;UBERON:0000411,7.82e-10,10;UBERON:0001950,7.82e-10,10;UBERON:0000955,1.74e-09,47;UBERON:0006238,1.74e-09,47;UBERON:0001017,2.84e-09,73;UBERON:0002616,5.62e-09,46;UBERON:0001016,1.34e-08,75;UBERON:0010371,3.38e-08,73;UBERON:0002619,5.21e-08,17;UBERON:0002020,4.24e-07,34;UBERON:0004121,4.70e-07,95;UBERON:0000924,4.70e-07,95;UBERON:0006601,4.70e-07,95|phase1_expression=1.28119077683835,0.348975407639361,0,0.60492842261366,1.00179145989269,0,0,0.129123323441576,0.563154888606667,0.468129052643987,0,0,0,0.0874204024189974,0,0,0.699561878128147,0,0,0,1.02051948181284,0,0,0,0.22940928106717,0.57423196411502,0,0.215471232685889,0,0,0,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.204169356262369,0.418531630736908,0,0,1.17646297606203,1.36609096991689,0,1.25896817975577,1.62203089951223,1.28482726513177,2.34717403304412,1.09012578190223,2.41654801007919,1.74986909166855,1.25987779462826,1.43752564364972,0,0,0,4.88792928468299,1.71920063963254,6.70373719960675,0.404632921719196,0,0.633831403506179,1.35537812827653,2.66788438833342,0.449949858640699,0,0.7104801149461,1.49800055259202,4.61061966385865,0.622137673850866,0.405017814995072,0.420649922702764,1.71390590642282,3.3130281142742,0.244981598429908,0,0,5.50579404996943,6.12899222808901,4.91540906419979,0.131886287730194,0.274462930807229,0,3.07101298901519,1.12552522006336,2.29197371665215,1.76777151284201,2.27794689278565,0.559198337475902,0.681535739998656,0.151143120213571,1.15945795480671,0,0.679971333707751,0.539703191637817,4.54843492213368,4.48026887097336,0.421333260395256,0.511290967734173,1.29893002301434,0,1.83096445709685,1.28326477414318,0,0,0,0,0.505524445014783,0.5709193985953,0.517875767294343,1.03909497345377,0.520455980298408,1.21786191324856,0.691846491768175,0.753613202763113,1.17588707135705,1.25666591329675,0.247194967734374,1.73519228303894,0,0.808834249737046,0.883366073841574,2.90925151881133,0,6.73395833126558,5.44561437714983,0,0,0,0.127070227073065,5.54225365797844,6.40500843946077,0.502617408451458,14.7750672163435,15.3429274398198,5.61027720310812,5.51620294430376,3.56437773476107,2.36373244159177,2.27450482590307,0.631325567659422,0.390361328888111,0.689706313300419,0.360124259610698,0.90422890701429,0.680364991513279,0.384341160854549,0.655912071918102,1.29351685369508,0,0.378212160335639,1.05570674498369,1.31517439456545,0.278047249225598,0.696504333044333,1.85203922767149,1.39323986772945,0,0.51469581422943,0,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0.787056926989615,0.617068451549513,1.16266972375204,0.804820204198858,0.817357396570186,1.31647879930784,1.14917224855367,1.62137619091711,1.31579988682799,1.97595103761946,0.671032093801859,8.20130799400096,1.13195073617213,0.330418782983798,0,0,0.928946687441754,0.257734922644187,0.605050573870028,0.444756087689741,0.951128130562796,0,1.15289268306808,1.00534083520108,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0.758671603812327,0.228497025219458,0,0.203651327845314,0.581857461502877,0.701358198903186,0.758838445491087,0.442830443938806,0.627994911365499,0.616985819609003,1.48226313543574,0.500535317148282,0.393117990226406,0,0.811440485554012,0,0.25462585178142,1.43848068725405,0.486405680325106,2.74561413188081,4.31304619582064,2.97712758134803,7.17686648163489,3.78868316920668,2.69096120282868,1.92977408545347,0.923765950833023,0.568474235311454,0.651859905768103,1.01847051465113,0.938760993154008,0.167506257441816,0.952174563544055,2.14647012643579,0.472905432318573,0.221464689648775,0.637819074629948,1.47476983244164,1.38147985492716,1.3018415272336,0,0,0.491764273019036,0.551873492609465,7.86697890940181,5.15731421005694,0.655739781506702,1.00988370881749,0.631016438832513,0,0.215423397732799,0.238968797952552,0.668396022247182,0,0.809621403349789,0,0,3.8558557970616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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52443 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000146003_5end | |||
|cluster_id=chr7:107756807..107756822,- | |||
|description=CAGE_peak_3_at_Mrpl48_5end | |||
|id=chr7:107756807..107756822,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!7.95e-14!122;UBERON:0000025!3.36e-12!114;UBERON:0000955!3.38e-09!50;UBERON:0006238!3.38e-09!50;UBERON:0001049!7.23e-09!52;UBERON:0005068!7.23e-09!52;UBERON:0006241!7.23e-09!52;UBERON:0007135!7.23e-09!52;UBERON:0002616!9.13e-09!49;UBERON:0002021!3.30e-08!10;UBERON:0000411!3.30e-08!10;UBERON:0001950!3.30e-08!10;UBERON:0000033!8.45e-08!63;UBERON:0001017!2.73e-07!73;UBERON:0005743!2.73e-07!73;UBERON:0004121!5.56e-07!102;UBERON:0000924!5.56e-07!102;UBERON:0006601!5.56e-07!102;UBERON:0000073!7.63e-07!75;UBERON:0001016!7.63e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.85e-13,122;UBERON:0000025,6.21e-12,114;UBERON:0000073,7.63e-12,54;UBERON:0001049,1.16e-10,52;UBERON:0005068,1.16e-10,52;UBERON:0006241,1.16e-10,52;UBERON:0007135,1.16e-10,52;UBERON:0002021,7.82e-10,10;UBERON:0000411,7.82e-10,10;UBERON:0001950,7.82e-10,10;UBERON:0000955,1.74e-09,47;UBERON:0006238,1.74e-09,47;UBERON:0001017,2.84e-09,73;UBERON:0002616,5.62e-09,46;UBERON:0001016,1.34e-08,75;UBERON:0010371,3.38e-08,73;UBERON:0002619,5.21e-08,17;UBERON:0002020,4.24e-07,34;UBERON:0004121,4.70e-07,95;UBERON:0000924,4.70e-07,95;UBERON:0006601,4.70e-07,95 | |||
|phase1_expression=1.28119077683835,0.348975407639361,0,0.60492842261366,1.00179145989269,0,0,0.129123323441576,0.563154888606667,0.468129052643987,0,0,0,0.0874204024189974,0,0,0.699561878128147,0,0,0,1.02051948181284,0,0,0,0.22940928106717,0.57423196411502,0,0.215471232685889,0,0,0,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.204169356262369,0.418531630736908,0,0,1.17646297606203,1.36609096991689,0,1.25896817975577,1.62203089951223,1.28482726513177,2.34717403304412,1.09012578190223,2.41654801007919,1.74986909166855,1.25987779462826,1.43752564364972,0,0,0,4.88792928468299,1.71920063963254,6.70373719960675,0.404632921719196,0,0.633831403506179,1.35537812827653,2.66788438833342,0.449949858640699,0,0.7104801149461,1.49800055259202,4.61061966385865,0.622137673850866,0.405017814995072,0.420649922702764,1.71390590642282,3.3130281142742,0.244981598429908,0,0,5.50579404996943,6.12899222808901,4.91540906419979,0.131886287730194,0.274462930807229,0,3.07101298901519,1.12552522006336,2.29197371665215,1.76777151284201,2.27794689278565,0.559198337475902,0.681535739998656,0.151143120213571,1.15945795480671,0,0.679971333707751,0.539703191637817,4.54843492213368,4.48026887097336,0.421333260395256,0.511290967734173,1.29893002301434,0,1.83096445709685,1.28326477414318,0,0,0,0,0.505524445014783,0.5709193985953,0.517875767294343,1.03909497345377,0.520455980298408,1.21786191324856,0.691846491768175,0.753613202763113,1.17588707135705,1.25666591329675,0.247194967734374,1.73519228303894,0,0.808834249737046,0.883366073841574,2.90925151881133,0,6.73395833126558,5.44561437714983,0,0,0,0.127070227073065,5.54225365797844,6.40500843946077,0.502617408451458,14.7750672163435,15.3429274398198,5.61027720310812,5.51620294430376,3.56437773476107,2.36373244159177,2.27450482590307,0.631325567659422,0.390361328888111,0.689706313300419,0.360124259610698,0.90422890701429,0.680364991513279,0.384341160854549,0.655912071918102,1.29351685369508,0,0.378212160335639,1.05570674498369,1.31517439456545,0.278047249225598,0.696504333044333,1.85203922767149,1.39323986772945,0,0.51469581422943,0,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0.787056926989615,0.617068451549513,1.16266972375204,0.804820204198858,0.817357396570186,1.31647879930784,1.14917224855367,1.62137619091711,1.31579988682799,1.97595103761946,0.671032093801859,8.20130799400096,1.13195073617213,0.330418782983798,0,0,0.928946687441754,0.257734922644187,0.605050573870028,0.444756087689741,0.951128130562796,0,1.15289268306808,1.00534083520108,0.198956472041151,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0.758671603812327,0.228497025219458,0,0.203651327845314,0.581857461502877,0.701358198903186,0.758838445491087,0.442830443938806,0.627994911365499,0.616985819609003,1.48226313543574,0.500535317148282,0.393117990226406,0,0.811440485554012,0,0.25462585178142,1.43848068725405,0.486405680325106,2.74561413188081,4.31304619582064,2.97712758134803,7.17686648163489,3.78868316920668,2.69096120282868,1.92977408545347,0.923765950833023,0.568474235311454,0.651859905768103,1.01847051465113,0.938760993154008,0.167506257441816,0.952174563544055,2.14647012643579,0.472905432318573,0.221464689648775,0.637819074629948,1.47476983244164,1.38147985492716,1.3018415272336,0,0,0.491764273019036,0.551873492609465,7.86697890940181,5.15731421005694,0.655739781506702,1.00988370881749,0.631016438832513,0,0.215423397732799,0.238968797952552,0.668396022247182,0,0.809621403349789,0,0,3.85585579706168,1.84522110770749,1.78065603667255,2.28041743095006,2.63952196756057,1.32745138339963,0.728341908464944,0.906970670894253,0.188605079755898,1.18120757152309,1.22974059177571,1.29214146584111,0.363533729477506,1.06949213515416,0.948110273807448,1.05418608574999,0,2.04263763452273,0.18006109403131,0.258717367565509,1.28602221018955,0.886701168211368,0.891844088010353,0.493647061806363,1.8267896946876,0.469343416127421,0.21183207086382,1.7642271844397,3.46261131177108,1.45317984026315,1.56813604813205,2.38744688006273,3.11867709515616,1.45740418314925,5.00648315428376,0.170870880797853,2.27025554759545,0.925972636848558,0,0.136694227721025,0.228778173206523,0,0.839708713941948,0.414599921413271,0,0,1.21991680276109,1.29606408986162,0.836353184057875,1.09181281873089,1.48350781023303,1.40510874733071,0.785267825952089,0.518459893167171,0.621339313086926,1.12738587736838,0.598066184175915,1.32366792365678,0.972255941720238,2.19571699912143,2.19642963138012,1.40828686374905,2.99470085141085,2.09718688851422,1.44950472495604,1.15212002503146,0,0.608175645870493,0.616265742988964,0.129920822977795,0.716106782669926,0,0.120195449519969,0.443068581523732,0.100966449948148,0,0.201652370273681,0,0.192423683280659,0.233753804363138,0.906921534460845,0,0,0.167884616364078,1.73870634628971,4.31669693537719,1.28206136987086,2.14368379079066,1.50471631210609,16.942555278512,18.4130094602871,18.9055519435001,9.96748457593388,13.0165678756422,21.9064230243013,16.8755625057951,18.4631693321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| |||
|short_description=p3@Mrpl48 | |||
}} |
Latest revision as of 14:54, 25 September 2015
Short description: | p3@Mrpl48 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mrpl48_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000146003_5end |
EntrezGene: | Mrpl48 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.85e-13 | 122 |
tube | 6.21e-12 | 114 |
regional part of nervous system | 7.63e-12 | 54 |
neural tube | 1.16e-10 | 52 |
neural rod | 1.16e-10 | 52 |
future spinal cord | 1.16e-10 | 52 |
neural keel | 1.16e-10 | 52 |
occipital lobe | 7.82e-10 | 10 |
visual cortex | 7.82e-10 | 10 |
neocortex | 7.82e-10 | 10 |
brain | 1.74e-09 | 47 |
future brain | 1.74e-09 | 47 |
central nervous system | 2.84e-09 | 73 |
regional part of brain | 5.62e-09 | 46 |
nervous system | 1.34e-08 | 75 |
ecto-epithelium | 3.38e-08 | 73 |
regional part of cerebral cortex | 5.21e-08 | 17 |
gray matter | 4.24e-07 | 34 |
ectoderm-derived structure | 4.70e-07 | 95 |
ectoderm | 4.70e-07 | 95 |
presumptive ectoderm | 4.70e-07 | 95 |